RNA–Protein interactions for RNA: ENST00000451871.1

KARSP1-201, Transcript of lysyl-tRNA synthetase pseudogene 1, humanhuman

BASIC

Gene KARSP1, Length 1,752 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARSP1-201ENST00000451871 CAMKK2Q96RR4 588 aa9.14□□□□□ -0.95
KARSP1-201ENST00000451871 SHANK3Q9BYB0 1731 aa9.14□□□□□ -0.95
KARSP1-201ENST00000451871 PLCH1Q4KWH8 1693 aa9.14□□□□□ -0.95
KARSP1-201ENST00000451871 SMAPO00193 183 aa9.14□□□□□ -0.95
KARSP1-201ENST00000451871 PNMA3Q9UL41 463 aa9.14□□□□□ -0.95
KARSP1-201ENST00000451871 HFM1A2PYH4 1435 aa9.13□□□□□ -0.95
KARSP1-201ENST00000451871 KCNQ2O43526 872 aa9.13□□□□□ -0.95
KARSP1-201ENST00000451871 SKIV2LQ15477 1246 aaKnown RBP9.13□□□□□ -0.95
KARSP1-201ENST00000451871 POTEEQ6S8J3 1075 aa9.13□□□□□ -0.95
KARSP1-201ENST00000451871 CABLES1Q8TDN4 633 aa9.13□□□□□ -0.95
KARSP1-201ENST00000451871 POLR3EQ9NVU0 708 aa9.13□□□□□ -0.95
KARSP1-201ENST00000451871 PSEN2P49810 448 aa9.12□□□□□ -0.95
KARSP1-201ENST00000451871 MYSM1Q5VVJ2 828 aa9.12□□□□□ -0.95
KARSP1-201ENST00000451871 NEXMIFQ5QGS0 1516 aa9.12□□□□□ -0.95
KARSP1-201ENST00000451871 FAM83GA6ND36 823 aa9.12□□□□□ -0.95
KARSP1-201ENST00000451871 NBPF26B4DH59 902 aa9.12□□□□□ -0.95
KARSP1-201ENST00000451871 KRT28Q7Z3Y7 464 aa9.12□□□□□ -0.95
KARSP1-201ENST00000451871 PRAG1Q86YV5 1406 aa9.11□□□□□ -0.95
KARSP1-201ENST00000451871 LHX8Q68G74 356 aa9.11□□□□□ -0.95
KARSP1-201ENST00000451871 PACS2Q86VP3 889 aa9.11□□□□□ -0.95
KARSP1-201ENST00000451871 ZBED2Q9BTP6 218 aa9.11□□□□□ -0.95
KARSP1-201ENST00000451871 TMEM134Q9H6X4 195 aa9.11□□□□□ -0.95
KARSP1-201ENST00000451871 CDC42BPGQ6DT37 1551 aa9.11□□□□□ -0.95
KARSP1-201ENST00000451871 TRIM37O94972 964 aa9.1□□□□□ -0.95
KARSP1-201ENST00000451871 HSPA6P17066 643 aa9.1□□□□□ -0.95
KARSP1-201ENST00000451871 DNAJB2P25686 324 aa9.1□□□□□ -0.95
KARSP1-201ENST00000451871 TBC1D2Q9BYX2 928 aa9.1□□□□□ -0.95
KARSP1-201ENST00000451871 NUP155O75694 1391 aa9.1□□□□□ -0.95
KARSP1-201ENST00000451871 CASZ1Q86V15 1759 aa9.1□□□□□ -0.95
KARSP1-201ENST00000451871 APBA3O96018 575 aa9.09□□□□□ -0.95
KARSP1-201ENST00000451871 CD46P15529 392 aa9.09□□□□□ -0.95
KARSP1-201ENST00000451871 FAM50AQ14320 339 aaKnown RBP9.09□□□□□ -0.95
KARSP1-201ENST00000451871 VARS2Q5ST30 1063 aaKnown RBP9.09□□□□□ -0.95
KARSP1-201ENST00000451871 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.09□□□□□ -0.95
KARSP1-201ENST00000451871 PARD3Q8TEW0 1356 aa9.09□□□□□ -0.95
KARSP1-201ENST00000451871 CCDC144AA2RUR9 1427 aa9.09□□□□□ -0.95
KARSP1-201ENST00000451871 DDX11L8A8MPP1 907 aa9.09□□□□□ -0.95
KARSP1-201ENST00000451871 NBPF8Q3BBV2 869 aa9.09□□□□□ -0.95
KARSP1-201ENST00000451871 COL13A1Q5TAT6 717 aaPredicted RBP9.09□□□□□ -0.95
KARSP1-201ENST00000451871 NBPF14Q5TI25 921 aa9.09□□□□□ -0.95
KARSP1-201ENST00000451871 KIAA1468Q9P260 1216 aa9.09□□□□□ -0.95
KARSP1-201ENST00000451871 ST18O60284 1047 aa9.08□□□□□ -0.96
KARSP1-201ENST00000451871 TNS4Q8IZW8 715 aa9.08□□□□□ -0.96
KARSP1-201ENST00000451871 BTG4Q9NY30 223 aa9.08□□□□□ -0.96
KARSP1-201ENST00000451871 AXIN2Q9Y2T1 843 aa9.08□□□□□ -0.96
KARSP1-201ENST00000451871 NRAPQ86VF7 1730 aa9.08□□□□□ -0.96
KARSP1-201ENST00000451871 KIF1BO60333 1816 aa9.08□□□□□ -0.96
KARSP1-201ENST00000451871 ERBB3P21860 1342 aa9.08□□□□□ -0.96
KARSP1-201ENST00000451871 NAIPQ13075 1403 aa9.07□□□□□ -0.96
KARSP1-201ENST00000451871 DLC1Q96QB1 1528 aa9.07□□□□□ -0.96
KARSP1-201ENST00000451871 ABCA3Q99758 1704 aa9.07□□□□□ -0.96
KARSP1-201ENST00000451871 RAD21O60216 631 aa9.07□□□□□ -0.96
KARSP1-201ENST00000451871 PSME1Q06323 249 aa9.07□□□□□ -0.96
KARSP1-201ENST00000451871 FAM196AQ6ZSG2 479 aa9.07□□□□□ -0.96
KARSP1-201ENST00000451871 SPIRE2Q8WWL2 714 aa9.07□□□□□ -0.96
KARSP1-201ENST00000451871 CCDC97Q96F63 343 aaPredicted RBP9.07□□□□□ -0.96
KARSP1-201ENST00000451871 RGPD8O14715 1765 aaPredicted RBP9.07□□□□□ -0.96
KARSP1-201ENST00000451871 TNS3Q68CZ2 1445 aa9.07□□□□□ -0.96
KARSP1-201ENST00000451871 KIF1AQ12756 1690 aa9.07□□□□□ -0.96
KARSP1-201ENST00000451871 CLK2P49760 499 aaKnown RBP9.07□□□□□ -0.96
KARSP1-201ENST00000451871 DMRTA1Q5VZB9 504 aa9.07□□□□□ -0.96
KARSP1-201ENST00000451871 WAPLQ7Z5K2 1190 aa9.07□□□□□ -0.96
KARSP1-201ENST00000451871 SPATA31A5Q5VU36 1347 aa9.06□□□□□ -0.96
KARSP1-201ENST00000451871 SPATA31A7Q8IWB4 1347 aa9.06□□□□□ -0.96
KARSP1-201ENST00000451871 KCTD17Q8N5Z5 321 aa9.06□□□□□ -0.96
KARSP1-201ENST00000451871 MARVELD3Q96A59 401 aa9.06□□□□□ -0.96
KARSP1-201ENST00000451871 LIMD1Q9UGP4 676 aa9.06□□□□□ -0.96
KARSP1-201ENST00000451871 SERPINA10Q9UK55 444 aa9.06□□□□□ -0.96
KARSP1-201ENST00000451871 COG6Q9Y2V7 657 aa9.06□□□□□ -0.96
KARSP1-201ENST00000451871 CLTCL1P53675 1640 aa9.06□□□□□ -0.96
KARSP1-201ENST00000451871 GOLGB1Q14789 3259 aaKnown RBP9.05□□□□□ -0.96
KARSP1-201ENST00000451871 THSD7AQ9UPZ6 1657 aa9.05□□□□□ -0.96
KARSP1-201ENST00000451871 ARHGAP33O14559 1287 aa9.05□□□□□ -0.96
KARSP1-201ENST00000451871 AEBP1Q8IUX7 1158 aa9.05□□□□□ -0.96
KARSP1-201ENST00000451871 SULF1Q8IWU6 871 aa9.05□□□□□ -0.96
KARSP1-201ENST00000451871 TRAIPQ9BWF2 469 aa9.04□□□□□ -0.96
KARSP1-201ENST00000451871 SNRKQ9NRH2 765 aa9.04□□□□□ -0.96
KARSP1-201ENST00000451871 FMN2Q9NZ56 1722 aa9.04□□□□□ -0.96
KARSP1-201ENST00000451871 SBNO1A3KN83 1393 aa9.04□□□□□ -0.96
KARSP1-201ENST00000451871 ARHGEF10O15013 1369 aa9.04□□□□□ -0.96
KARSP1-201ENST00000451871 PLSCR2Q9NRY7 297 aa9.04□□□□□ -0.96
KARSP1-201ENST00000451871 SEPT9Q9UHD8 586 aaPredicted RBP9.04□□□□□ -0.96
KARSP1-201ENST00000451871 COL14A1Q05707 1796 aaKnown RBP9.03□□□□□ -0.96
KARSP1-201ENST00000451871 EMP3P54852 163 aa9.03□□□□□ -0.96
KARSP1-201ENST00000451871 DIXDC1Q155Q3 683 aa9.03□□□□□ -0.96
KARSP1-201ENST00000451871 STK26Q9P289 416 aa9.03□□□□□ -0.96
KARSP1-201ENST00000451871 RABGEF1Q9UJ41 708 aa9.03□□□□□ -0.96
KARSP1-201ENST00000451871 RIC3Q7Z5B4 369 aa9.02□□□□□ -0.97
KARSP1-201ENST00000451871 RPGRIP1LQ68CZ1 1315 aa9.02□□□□□ -0.97
KARSP1-201ENST00000451871 ROCK1Q13464 1354 aa9.02□□□□□ -0.97
KARSP1-201ENST00000451871 SPDYE5A6NIY4 337 aa9.01□□□□□ -0.97
KARSP1-201ENST00000451871 RETREG2Q8NC44 543 aa9.01□□□□□ -0.97
KARSP1-201ENST00000451871 MOXD2PA6NHM9 499 aa9.01□□□□□ -0.97
KARSP1-201ENST00000451871 RDH13Q8NBN7 331 aa9.01□□□□□ -0.97
KARSP1-201ENST00000451871 SYT17Q9BSW7 474 aa9.01□□□□□ -0.97
KARSP1-201ENST00000451871 SLC4A5Q9BY07 1137 aa9.01□□□□□ -0.97
KARSP1-201ENST00000451871 FHDC1Q9C0D6 1143 aaPredicted RBP9.01□□□□□ -0.97
KARSP1-201ENST00000451871 SPATA31A1Q5TZJ5 1347 aa9.01□□□□□ -0.97
KARSP1-201ENST00000451871 PLEKHH1Q9ULM0 1364 aa9.01□□□□□ -0.97
KARSP1-201ENST00000451871 PPLO60437 1756 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms