RNA–Protein interactions for RNA: ENST00000450894.7

ITGB4-203, Transcript of integrin subunit beta 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ITGB4, Length 5,645 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-203ENST00000450894 RNF187Q5TA31 235 aaPredicted RBP16.4■□□□□ 0.22
ITGB4-203ENST00000450894 SRRTQ9BXP5 876 aaKnown RBP16.4■□□□□ 0.22
ITGB4-203ENST00000450894 TANGO6Q9C0B7 1094 aa16.4■□□□□ 0.22
ITGB4-203ENST00000450894 CEP131Q9UPN4 1083 aa16.4■□□□□ 0.22
ITGB4-203ENST00000450894 LIMCH1Q9UPQ0 1083 aa16.4■□□□□ 0.22
ITGB4-203ENST00000450894 C8orf34Q49A92 452 aa16.39■□□□□ 0.22
ITGB4-203ENST00000450894 C16orf45Q96MC5 204 aaPredicted RBP16.39■□□□□ 0.22
ITGB4-203ENST00000450894 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.39■□□□□ 0.21
ITGB4-203ENST00000450894 RPGRIP1LQ68CZ1 1315 aa16.39■□□□□ 0.21
ITGB4-203ENST00000450894 MX1P20591 662 aa16.39■□□□□ 0.21
ITGB4-203ENST00000450894 TMPOP42166 694 aaKnown RBP16.39■□□□□ 0.21
ITGB4-203ENST00000450894 IMMTQ16891 758 aaKnown RBP16.39■□□□□ 0.21
ITGB4-203ENST00000450894 IBSPP21815 317 aaPredicted RBP16.39■□□□□ 0.21
ITGB4-203ENST00000450894 KIF20AO95235 890 aa16.39■□□□□ 0.21
ITGB4-203ENST00000450894 KRT18P05783 430 aaKnown RBP16.39■□□□□ 0.21
ITGB4-203ENST00000450894 NFE2L2Q16236 605 aa16.39■□□□□ 0.21
ITGB4-203ENST00000450894 PCF11O94913 1555 aaKnown RBP16.38■□□□□ 0.21
ITGB4-203ENST00000450894 CASTP20810 708 aaKnown RBP16.38■□□□□ 0.21
ITGB4-203ENST00000450894 SNW1Q13573 536 aaKnown RBP16.38■□□□□ 0.21
ITGB4-203ENST00000450894 SMARCC1Q92922 1105 aaPredicted RBP16.38■□□□□ 0.21
ITGB4-203ENST00000450894 SMC5Q8IY18 1101 aa16.38■□□□□ 0.21
ITGB4-203ENST00000450894 CFAP70Q5T0N1 1121 aa16.38■□□□□ 0.21
ITGB4-203ENST00000450894 SYNJ2O15056 1496 aa16.38■□□□□ 0.21
ITGB4-203ENST00000450894 TOP1P11387 765 aaKnown RBP16.38■□□□□ 0.21
ITGB4-203ENST00000450894 KIF4BQ2VIQ3 1234 aa16.38■□□□□ 0.21
ITGB4-203ENST00000450894 ZSCAN25Q6NSZ9 544 aa16.37■□□□□ 0.21
ITGB4-203ENST00000450894 IL16Q14005 1332 aa16.37■□□□□ 0.21
ITGB4-203ENST00000450894 LMAN1P49257 510 aa16.37■□□□□ 0.21
ITGB4-203ENST00000450894 OGFRQ9NZT2 677 aa16.37■□□□□ 0.21
ITGB4-203ENST00000450894 NSD2O96028 1365 aa16.37■□□□□ 0.21
ITGB4-203ENST00000450894 FYB1O15117 783 aa16.37■□□□□ 0.21
ITGB4-203ENST00000450894 GLRX3O76003 335 aaKnown RBP16.37■□□□□ 0.21
ITGB4-203ENST00000450894 HMGB1P09429 215 aaKnown RBP16.37■□□□□ 0.21
ITGB4-203ENST00000450894 DNAAF4Q8WXU2 420 aa16.37■□□□□ 0.21
ITGB4-203ENST00000450894 AIMP1Q12904 312 aaKnown RBP16.36■□□□□ 0.21
ITGB4-203ENST00000450894 RAB3GAP1Q15042 981 aa16.36■□□□□ 0.21
ITGB4-203ENST00000450894 ZNF397Q8NF99 534 aaPredicted RBP16.36■□□□□ 0.21
ITGB4-203ENST00000450894 GOLGA6L10A0A0M3HER8 536 aa16.36■□□□□ 0.21
ITGB4-203ENST00000450894 NSD3Q9BZ95 1437 aa16.36■□□□□ 0.21
ITGB4-203ENST00000450894 EIF5P55010 431 aaKnown RBP16.36■□□□□ 0.21
ITGB4-203ENST00000450894 IRX3P78415 501 aaPredicted RBP16.36■□□□□ 0.21
ITGB4-203ENST00000450894 TBC1D9Q6ZT07 1266 aa16.36■□□□□ 0.21
ITGB4-203ENST00000450894 SLC3A2P08195 630 aaKnown RBP16.35■□□□□ 0.21
ITGB4-203ENST00000450894 KIF1BPQ96EK5 621 aa16.35■□□□□ 0.21
ITGB4-203ENST00000450894 MNAT1P51948 309 aa16.35■□□□□ 0.21
ITGB4-203ENST00000450894 CCDC91Q7Z6B0 441 aa16.35■□□□□ 0.21
ITGB4-203ENST00000450894 MAPKBP1O60336 1514 aa16.35■□□□□ 0.21
ITGB4-203ENST00000450894 CCDC158Q5M9N0 1113 aa16.35■□□□□ 0.21
ITGB4-203ENST00000450894 SPA17Q15506 151 aa16.34■□□□□ 0.21
ITGB4-203ENST00000450894 ZNF692Q9BU19 519 aaPredicted RBP16.34■□□□□ 0.21
ITGB4-203ENST00000450894 STX6O43752 255 aa16.34■□□□□ 0.21
ITGB4-203ENST00000450894 CCDC69A6NI79 296 aa16.33■□□□□ 0.21
ITGB4-203ENST00000450894 ANAPC15P60006 121 aa16.33■□□□□ 0.21
ITGB4-203ENST00000450894 SSH1Q8WYL5 1049 aa16.33■□□□□ 0.21
ITGB4-203ENST00000450894 CCDC57Q2TAC2 916 aa16.33■□□□□ 0.2
ITGB4-203ENST00000450894 TRMT1Q9NXH9 659 aaKnown RBP16.33■□□□□ 0.2
ITGB4-203ENST00000450894 MAP4K4O95819 1239 aaPredicted RBP16.33■□□□□ 0.2
ITGB4-203ENST00000450894 NF2P35240 595 aa16.33■□□□□ 0.2
ITGB4-203ENST00000450894 NUCB1Q02818 461 aa16.33■□□□□ 0.2
ITGB4-203ENST00000450894 SMC1AQ14683 1233 aaKnown RBP16.33■□□□□ 0.2
ITGB4-203ENST00000450894 CWC27Q6UX04 472 aaKnown RBP16.33■□□□□ 0.2
ITGB4-203ENST00000450894 HDGFL1Q5TGJ6 251 aa16.33■□□□□ 0.2
ITGB4-203ENST00000450894 GRIN2BQ13224 1484 aa16.32■□□□□ 0.2
ITGB4-203ENST00000450894 RALGAPBQ86X10 1494 aa16.32■□□□□ 0.2
ITGB4-203ENST00000450894 LUZP1Q86V48 1076 aa16.32■□□□□ 0.2
ITGB4-203ENST00000450894 FAM200AQ8TCP9 573 aa16.32■□□□□ 0.2
ITGB4-203ENST00000450894 PANK2Q9BZ23 570 aa16.32■□□□□ 0.2
ITGB4-203ENST00000450894 PTPRCP08575 1304 aa16.32■□□□□ 0.2
ITGB4-203ENST00000450894 IGHDP01880 384 aa16.32■□□□□ 0.2
ITGB4-203ENST00000450894 TTC39AQ5SRH9 613 aa16.32■□□□□ 0.2
ITGB4-203ENST00000450894 PLEKHO1Q53GL0 409 aaPredicted RBP16.31■□□□□ 0.2
ITGB4-203ENST00000450894 TTC22Q5TAA0 569 aa16.31■□□□□ 0.2
ITGB4-203ENST00000450894 TMEM132EQ6IEE7 984 aa16.31■□□□□ 0.2
ITGB4-203ENST00000450894 NACAP1Q9BZK3 213 aa16.31■□□□□ 0.2
ITGB4-203ENST00000450894 SLC12A5Q9H2X9 1139 aa16.31■□□□□ 0.2
ITGB4-203ENST00000450894 PHAXQ9H814 394 aaKnown RBP16.31■□□□□ 0.2
ITGB4-203ENST00000450894 GCOM1H8Y6P7 765 aaPredicted RBP16.31■□□□□ 0.2
ITGB4-203ENST00000450894 MYZAPP0CAP1 466 aa16.31■□□□□ 0.2
ITGB4-203ENST00000450894 GIGYF2Q6Y7W6 1299 aaKnown RBP16.31■□□□□ 0.2
ITGB4-203ENST00000450894 AACSQ86V21 672 aa16.31■□□□□ 0.2
ITGB4-203ENST00000450894 V9GYY5 206 aaPredicted RBP16.31■□□□□ 0.2
ITGB4-203ENST00000450894 IFFO1Q0D2I5 559 aa16.3■□□□□ 0.2
ITGB4-203ENST00000450894 MTMR7Q9Y216 660 aa16.3■□□□□ 0.2
ITGB4-203ENST00000450894 SLU7O95391 586 aaKnown RBP16.3■□□□□ 0.2
ITGB4-203ENST00000450894 CCDC175P0C221 793 aa16.3■□□□□ 0.2
ITGB4-203ENST00000450894 ZNF165P49910 485 aa16.3■□□□□ 0.2
ITGB4-203ENST00000450894 GABPB1Q06547 395 aaPredicted RBP16.3■□□□□ 0.2
ITGB4-203ENST00000450894 ARHGAP45Q92619 1136 aa16.3■□□□□ 0.2
ITGB4-203ENST00000450894 RAI14Q9P0K7 980 aa16.3■□□□□ 0.2
ITGB4-203ENST00000450894 EHBP1Q8NDI1 1231 aa16.3■□□□□ 0.2
ITGB4-203ENST00000450894 TUBBP07437 444 aa16.3■□□□□ 0.2
ITGB4-203ENST00000450894 SRGAP3O43295 1099 aa16.3■□□□□ 0.2
ITGB4-203ENST00000450894 CCDC113Q9H0I3 377 aa16.3■□□□□ 0.2
ITGB4-203ENST00000450894 ZSCAN16Q9H4T2 348 aaPredicted RBP16.29■□□□□ 0.2
ITGB4-203ENST00000450894 ARFGAP3Q9NP61 516 aa16.29■□□□□ 0.2
ITGB4-203ENST00000450894 ZSCAN22P10073 491 aaPredicted RBP16.29■□□□□ 0.2
ITGB4-203ENST00000450894 TRIM27P14373 513 aa16.29■□□□□ 0.2
ITGB4-203ENST00000450894 EPRSP07814 1512 aaKnown RBP16.29■□□□□ 0.2
ITGB4-203ENST00000450894 PAFAH1B1P43034 410 aa16.29■□□□□ 0.2
ITGB4-203ENST00000450894 RBM27Q9P2N5 1060 aaKnown RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms