RNA–Protein interactions for RNA: ENST00000449502.5

RFC4-210, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-210ENST00000449502 CYP27B1O15528 508 aa12.35□□□□□ -0.43
RFC4-210ENST00000449502 BRPF1P55201 1214 aaPredicted RBP12.35□□□□□ -0.43
RFC4-210ENST00000449502 MRPL50Q8N5N7 158 aaKnown RBP12.35□□□□□ -0.43
RFC4-210ENST00000449502 LMO7Q8WWI1 1683 aa12.35□□□□□ -0.43
RFC4-210ENST00000449502 FAM208AQ9UK61 1670 aaKnown RBP12.35□□□□□ -0.43
RFC4-210ENST00000449502 EIF4A1P60842 406 aaKnown RBP12.34□□□□□ -0.43
RFC4-210ENST00000449502 KRT24Q2M2I5 525 aa12.34□□□□□ -0.43
RFC4-210ENST00000449502 B4GALNT3Q6L9W6 998 aa12.34□□□□□ -0.43
RFC4-210ENST00000449502 PANK1Q8TE04 598 aa12.34□□□□□ -0.43
RFC4-210ENST00000449502 CLUAP1Q96AJ1 413 aa12.34□□□□□ -0.43
RFC4-210ENST00000449502 CHMP4BQ9H444 224 aaKnown RBP12.34□□□□□ -0.43
RFC4-210ENST00000449502 SPATA31A1Q5TZJ5 1347 aa12.34□□□□□ -0.43
RFC4-210ENST00000449502 ERVV-2B6SEH9 535 aa12.33□□□□□ -0.44
RFC4-210ENST00000449502 HOXB7P09629 217 aa12.33□□□□□ -0.44
RFC4-210ENST00000449502 HDGFL1Q5TGJ6 251 aa12.33□□□□□ -0.44
RFC4-210ENST00000449502 NFATC2IPQ8NCF5 419 aa12.33□□□□□ -0.44
RFC4-210ENST00000449502 ARHGAP45Q92619 1136 aa12.33□□□□□ -0.44
RFC4-210ENST00000449502 COG6Q9Y2V7 657 aa12.33□□□□□ -0.44
RFC4-210ENST00000449502 ABCA3Q99758 1704 aa12.33□□□□□ -0.44
RFC4-210ENST00000449502 A0A0G2JS52 829 aa12.32□□□□□ -0.44
RFC4-210ENST00000449502 SLC4A2P04920 1241 aa12.32□□□□□ -0.44
RFC4-210ENST00000449502 TRIM27P14373 513 aa12.32□□□□□ -0.44
RFC4-210ENST00000449502 EIF2S2P20042 333 aaKnown RBP12.32□□□□□ -0.44
RFC4-210ENST00000449502 MYT1Q01538 1121 aa12.32□□□□□ -0.44
RFC4-210ENST00000449502 AAMPQ13685 434 aa12.32□□□□□ -0.44
RFC4-210ENST00000449502 NKX1-1Q15270 411 aaPredicted RBP12.32□□□□□ -0.44
RFC4-210ENST00000449502 DDB1Q16531 1140 aa12.32□□□□□ -0.44
RFC4-210ENST00000449502 ITPRIPQ8IWB1 547 aa12.32□□□□□ -0.44
RFC4-210ENST00000449502 USP21Q9UK80 565 aa12.32□□□□□ -0.44
RFC4-210ENST00000449502 SPATA31A5Q5VU36 1347 aa12.32□□□□□ -0.44
RFC4-210ENST00000449502 SPATA31A7Q8IWB4 1347 aa12.32□□□□□ -0.44
RFC4-210ENST00000449502 VPS72Q15906 364 aa12.31□□□□□ -0.44
RFC4-210ENST00000449502 ZNF790Q6PG37 636 aa12.31□□□□□ -0.44
RFC4-210ENST00000449502 FNBP4Q8N3X1 1017 aaPredicted RBP12.31□□□□□ -0.44
RFC4-210ENST00000449502 NECTIN2Q92692 538 aa12.31□□□□□ -0.44
RFC4-210ENST00000449502 TMOD3Q9NYL9 352 aa12.31□□□□□ -0.44
RFC4-210ENST00000449502 PTPRCP08575 1304 aa12.31□□□□□ -0.44
RFC4-210ENST00000449502 KDM6AO15550 1401 aaPredicted RBP12.3□□□□□ -0.44
RFC4-210ENST00000449502 KCNQ3O43525 872 aa12.3□□□□□ -0.44
RFC4-210ENST00000449502 MVPQ14764 893 aaKnown RBP12.3□□□□□ -0.44
RFC4-210ENST00000449502 BARGINQ6ZT62 677 aa12.3□□□□□ -0.44
RFC4-210ENST00000449502 FMNL2Q96PY5 1086 aa12.3□□□□□ -0.44
RFC4-210ENST00000449502 DDX19BQ9UMR2 479 aa12.3□□□□□ -0.44
RFC4-210ENST00000449502 SLIT2O94813 1529 aa12.3□□□□□ -0.44
RFC4-210ENST00000449502 SLC39A6Q13433 755 aa12.29□□□□□ -0.44
RFC4-210ENST00000449502 RGPD5Q99666 1765 aa12.28□□□□□ -0.44
RFC4-210ENST00000449502 GIGYF1O75420 1035 aaPredicted RBP12.28□□□□□ -0.44
RFC4-210ENST00000449502 TMEM57Q8N5G2 664 aa12.28□□□□□ -0.44
RFC4-210ENST00000449502 RGPD2P0DJD1 1756 aa12.28□□□□□ -0.44
RFC4-210ENST00000449502 DISP2A7MBM2 1401 aa12.28□□□□□ -0.44
RFC4-210ENST00000449502 SNRPA1P09661 255 aaKnown RBP12.27□□□□□ -0.45
RFC4-210ENST00000449502 RLBP1P12271 317 aa12.27□□□□□ -0.45
RFC4-210ENST00000449502 FKBP5Q13451 457 aaPredicted RBP12.27□□□□□ -0.45
RFC4-210ENST00000449502 FAM98CQ17RN3 349 aaKnown RBP12.27□□□□□ -0.45
RFC4-210ENST00000449502 SYTL4Q96C24 671 aaPredicted RBP12.27□□□□□ -0.45
RFC4-210ENST00000449502 DBF4Q9UBU7 674 aaPredicted RBP12.27□□□□□ -0.45
RFC4-210ENST00000449502 TNNQ9UQP3 1299 aa12.27□□□□□ -0.45
RFC4-210ENST00000449502 LRRC37A3O60309 1634 aa12.26□□□□□ -0.45
RFC4-210ENST00000449502 TRPC5Q9UL62 973 aaPredicted RBP12.26□□□□□ -0.45
RFC4-210ENST00000449502 AFF2P51816 1311 aa12.26□□□□□ -0.45
RFC4-210ENST00000449502 PARP4Q9UKK3 1724 aaKnown RBP12.25□□□□□ -0.45
RFC4-210ENST00000449502 DLG5Q8TDM6 1919 aa12.25□□□□□ -0.45
RFC4-210ENST00000449502 FLIIQ13045 1269 aa12.25□□□□□ -0.45
RFC4-210ENST00000449502 SLC4A10Q6U841 1118 aa12.25□□□□□ -0.45
RFC4-210ENST00000449502 ZNF496Q96IT1 587 aaPredicted RBP12.25□□□□□ -0.45
RFC4-210ENST00000449502 CHPF2Q9P2E5 772 aa12.25□□□□□ -0.45
RFC4-210ENST00000449502 TNS2Q63HR2 1409 aa12.25□□□□□ -0.45
RFC4-210ENST00000449502 ABCC4O15439 1325 aa12.24□□□□□ -0.45
RFC4-210ENST00000449502 DDX58O95786 925 aaKnown RBP12.24□□□□□ -0.45
RFC4-210ENST00000449502 CCT4P50991 539 aaKnown RBP12.24□□□□□ -0.45
RFC4-210ENST00000449502 HYPKQ9NX55 129 aa12.24□□□□□ -0.45
RFC4-210ENST00000449502 LRP6O75581 1613 aa12.23□□□□□ -0.45
RFC4-210ENST00000449502 MRC1P22897 1456 aa12.23□□□□□ -0.45
RFC4-210ENST00000449502 BCL9LQ86UU0 1499 aa12.23□□□□□ -0.45
RFC4-210ENST00000449502 PTCD1O75127 700 aaKnown RBP12.23□□□□□ -0.45
RFC4-210ENST00000449502 CENPQQ7L2Z9 268 aaPredicted RBP12.23□□□□□ -0.45
RFC4-210ENST00000449502 GJD4Q96KN9 370 aaPredicted RBP12.23□□□□□ -0.45
RFC4-210ENST00000449502 RWDD1Q9H446 243 aaPredicted RBP12.23□□□□□ -0.45
RFC4-210ENST00000449502 PKD1L3Q7Z443 1732 aa12.23□□□□□ -0.45
RFC4-210ENST00000449502 PRIM1P49642 420 aaKnown RBP12.22□□□□□ -0.45
RFC4-210ENST00000449502 G2E3Q7L622 706 aa12.22□□□□□ -0.45
RFC4-210ENST00000449502 PIGBQ92521 554 aa12.22□□□□□ -0.45
RFC4-210ENST00000449502 TEX13AQ9BXU3 409 aaPredicted RBP12.22□□□□□ -0.45
RFC4-210ENST00000449502 DDX21Q9NR30 783 aaKnown RBP eCLIP12.22□□□□□ -0.45
RFC4-210ENST00000449502 HEG1Q9ULI3 1381 aa12.21□□□□□ -0.45
RFC4-210ENST00000449502 PRAMEF22A3QJZ6 481 aa12.21□□□□□ -0.45
RFC4-210ENST00000449502 INTS3Q68E01 1043 aaKnown RBP12.21□□□□□ -0.45
RFC4-210ENST00000449502 RBM42Q9BTD8 480 aaKnown RBP12.21□□□□□ -0.45
RFC4-210ENST00000449502 QTRT2Q9H974 415 aaKnown RBP12.21□□□□□ -0.45
RFC4-210ENST00000449502 PLCH1Q4KWH8 1693 aa12.21□□□□□ -0.45
RFC4-210ENST00000449502 F6X3S4 739 aa12.2□□□□□ -0.46
RFC4-210ENST00000449502 STARD3NLO95772 234 aa12.2□□□□□ -0.46
RFC4-210ENST00000449502 MARCH10Q8NA82 808 aaPredicted RBP12.2□□□□□ -0.46
RFC4-210ENST00000449502 ACSBG1Q96GR2 724 aa12.2□□□□□ -0.46
RFC4-210ENST00000449502 PHAXQ9H814 394 aaKnown RBP12.2□□□□□ -0.46
RFC4-210ENST00000449502 ATG3Q9NT62 314 aa12.2□□□□□ -0.46
RFC4-210ENST00000449502 ERBB4Q15303 1308 aa12.19□□□□□ -0.46
RFC4-210ENST00000449502 ZBTB7BO15156 539 aaPredicted RBP12.19□□□□□ -0.46
RFC4-210ENST00000449502 ANXA1P04083 346 aa12.19□□□□□ -0.46
RFC4-210ENST00000449502 MYL6BP14649 208 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms