RNA–Protein interactions for RNA: ENST00000449224.1

CRTAP-202, Transcript of cartilage associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CRTAP, Length 1,811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTAP-202ENST00000449224 VPS72Q15906 364 aa31.86■■■□□ 2.69
CRTAP-202ENST00000449224 SMC4Q9NTJ3 1288 aa31.86■■■□□ 2.69
CRTAP-202ENST00000449224 NKX1-1Q15270 411 aaPredicted RBP31.85■■■□□ 2.69
CRTAP-202ENST00000449224 SLC52A2Q9HAB3 445 aa31.85■■■□□ 2.69
CRTAP-202ENST00000449224 KDM3BQ7LBC6 1761 aa31.85■■■□□ 2.69
CRTAP-202ENST00000449224 ALDH1L2Q3SY69 923 aa31.84■■■□□ 2.69
CRTAP-202ENST00000449224 MRC1P22897 1456 aa31.84■■■□□ 2.69
CRTAP-202ENST00000449224 BARGINQ6ZT62 677 aa31.83■■■□□ 2.69
CRTAP-202ENST00000449224 TNKS1BP1Q9C0C2 1729 aaKnown RBP31.83■■■□□ 2.69
CRTAP-202ENST00000449224 EXOC5O00471 708 aa31.82■■■□□ 2.68
CRTAP-202ENST00000449224 FRAT1Q92837 279 aaPredicted RBP31.82■■■□□ 2.68
CRTAP-202ENST00000449224 NFATC2IPQ8NCF5 419 aa31.81■■■□□ 2.68
CRTAP-202ENST00000449224 TNS2Q63HR2 1409 aa31.8■■■□□ 2.68
CRTAP-202ENST00000449224 CANXP27824 592 aaKnown RBP31.8■■■□□ 2.68
CRTAP-202ENST00000449224 ERICH6BQ5W0A0 696 aa31.79■■■□□ 2.68
CRTAP-202ENST00000449224 KCNQ3O43525 872 aa31.79■■■□□ 2.68
CRTAP-202ENST00000449224 C20orf194Q5TEA3 1177 aa31.79■■■□□ 2.68
CRTAP-202ENST00000449224 AFF2P51816 1311 aa31.78■■■□□ 2.68
CRTAP-202ENST00000449224 CABP4P57796 275 aa31.78■■■□□ 2.68
CRTAP-202ENST00000449224 EIF4A1P60842 406 aaKnown RBP31.78■■■□□ 2.68
CRTAP-202ENST00000449224 ERVV-2B6SEH9 535 aa31.76■■■□□ 2.67
CRTAP-202ENST00000449224 DDB1Q16531 1140 aa31.76■■■□□ 2.67
CRTAP-202ENST00000449224 TCERG1O14776 1098 aaKnown RBP31.75■■■□□ 2.67
CRTAP-202ENST00000449224 BRPF1P55201 1214 aaPredicted RBP31.75■■■□□ 2.67
CRTAP-202ENST00000449224 MRPL50Q8N5N7 158 aaKnown RBP31.75■■■□□ 2.67
CRTAP-202ENST00000449224 SOS1Q07889 1333 aaPredicted RBP31.74■■■□□ 2.67
CRTAP-202ENST00000449224 FAM98CQ17RN3 349 aaKnown RBP31.74■■■□□ 2.67
CRTAP-202ENST00000449224 KIF16BQ96L93 1317 aa31.74■■■□□ 2.67
CRTAP-202ENST00000449224 NOB1Q9ULX3 412 aaKnown RBP31.72■■■□□ 2.67
CRTAP-202ENST00000449224 ZKSCAN2Q63HK3 967 aa31.72■■■□□ 2.67
CRTAP-202ENST00000449224 ZNF790Q6PG37 636 aa31.72■■■□□ 2.67
CRTAP-202ENST00000449224 SLC39A6Q13433 755 aa31.71■■■□□ 2.67
CRTAP-202ENST00000449224 PDE3AQ14432 1141 aa31.71■■■□□ 2.67
CRTAP-202ENST00000449224 TOGARAM1Q9Y4F4 1720 aa31.71■■■□□ 2.67
CRTAP-202ENST00000449224 CRBNQ96SW2 442 aa31.7■■■□□ 2.67
CRTAP-202ENST00000449224 EXOC6Q8TAG9 804 aa31.7■■■□□ 2.66
CRTAP-202ENST00000449224 IPO8O15397 1037 aaKnown RBP31.68■■■□□ 2.66
CRTAP-202ENST00000449224 HOXB7P09629 217 aa31.68■■■□□ 2.66
CRTAP-202ENST00000449224 TNNQ9UQP3 1299 aa31.68■■■□□ 2.66
CRTAP-202ENST00000449224 HEG1Q9ULI3 1381 aa31.67■■■□□ 2.66
CRTAP-202ENST00000449224 GJD4Q96KN9 370 aaPredicted RBP31.67■■■□□ 2.66
CRTAP-202ENST00000449224 ATRNO75882 1429 aa31.67■■■□□ 2.66
CRTAP-202ENST00000449224 ATF7IPQ6VMQ6 1270 aa31.66■■■□□ 2.66
CRTAP-202ENST00000449224 TTC5Q8N0Z6 440 aa31.66■■■□□ 2.66
CRTAP-202ENST00000449224 TRPC5Q9UL62 973 aaPredicted RBP31.66■■■□□ 2.66
CRTAP-202ENST00000449224 CCDC30Q5VVM6 783 aa31.65■■■□□ 2.66
CRTAP-202ENST00000449224 PANK1Q8TE04 598 aa31.65■■■□□ 2.66
CRTAP-202ENST00000449224 GLI3P10071 1580 aa31.65■■■□□ 2.66
CRTAP-202ENST00000449224 TRIM27P14373 513 aa31.65■■■□□ 2.66
CRTAP-202ENST00000449224 GIGYF1O75420 1035 aaPredicted RBP31.64■■■□□ 2.66
CRTAP-202ENST00000449224 CLUAP1Q96AJ1 413 aa31.64■■■□□ 2.66
CRTAP-202ENST00000449224 TMOD3Q9NYL9 352 aa31.64■■■□□ 2.66
CRTAP-202ENST00000449224 HDGFL1Q5TGJ6 251 aa31.63■■■□□ 2.65
CRTAP-202ENST00000449224 MARCH10Q8NA82 808 aaPredicted RBP31.63■■■□□ 2.65
CRTAP-202ENST00000449224 FBXO41Q8TF61 875 aa31.63■■■□□ 2.65
CRTAP-202ENST00000449224 MS4A1P11836 297 aa31.63■■■□□ 2.65
CRTAP-202ENST00000449224 NECTIN2Q92692 538 aa31.63■■■□□ 2.65
CRTAP-202ENST00000449224 STK31Q9BXU1 1019 aa31.63■■■□□ 2.65
CRTAP-202ENST00000449224 PPP4R2Q9NY27 417 aa31.63■■■□□ 2.65
CRTAP-202ENST00000449224 SLC4A2P04920 1241 aa31.62■■■□□ 2.65
CRTAP-202ENST00000449224 RLBP1P12271 317 aa31.62■■■□□ 2.65
CRTAP-202ENST00000449224 DZIP1LQ8IYY4 767 aaKnown RBP31.62■■■□□ 2.65
CRTAP-202ENST00000449224 ARHGAP45Q92619 1136 aa31.62■■■□□ 2.65
CRTAP-202ENST00000449224 ZNF496Q96IT1 587 aaPredicted RBP31.62■■■□□ 2.65
CRTAP-202ENST00000449224 A0A0G2JS52 829 aa31.61■■■□□ 2.65
CRTAP-202ENST00000449224 MYT1Q01538 1121 aa31.61■■■□□ 2.65
CRTAP-202ENST00000449224 FTSJ3Q8IY81 847 aaKnown RBP31.61■■■□□ 2.65
CRTAP-202ENST00000449224 EIF2S2P20042 333 aaKnown RBP31.61■■■□□ 2.65
CRTAP-202ENST00000449224 THSD7AQ9UPZ6 1657 aa31.6■■■□□ 2.65
CRTAP-202ENST00000449224 PAPPAQ13219 1627 aa31.6■■■□□ 2.65
CRTAP-202ENST00000449224 CHMP4AQ9BY43 222 aa31.6■■■□□ 2.65
CRTAP-202ENST00000449224 FMNL2Q96PY5 1086 aa31.59■■■□□ 2.65
CRTAP-202ENST00000449224 COG6Q9Y2V7 657 aa31.59■■■□□ 2.65
CRTAP-202ENST00000449224 QTRT2Q9H974 415 aaKnown RBP31.59■■■□□ 2.65
CRTAP-202ENST00000449224 ITGB4P16144 1822 aa31.58■■■□□ 2.65
CRTAP-202ENST00000449224 PRAMEF22A3QJZ6 481 aa31.58■■■□□ 2.65
CRTAP-202ENST00000449224 PIGBQ92521 554 aa31.58■■■□□ 2.65
CRTAP-202ENST00000449224 DOT1LQ8TEK3 1739 aa31.58■■■□□ 2.65
CRTAP-202ENST00000449224 BCL9O00512 1426 aa31.55■■■□□ 2.64
CRTAP-202ENST00000449224 UBR2Q8IWV8 1755 aa31.55■■■□□ 2.64
CRTAP-202ENST00000449224 API5Q9BZZ5 524 aaKnown RBP31.55■■■□□ 2.64
CRTAP-202ENST00000449224 C5P01031 1676 aa31.55■■■□□ 2.64
CRTAP-202ENST00000449224 SNRPA1P09661 255 aaKnown RBP31.54■■■□□ 2.64
CRTAP-202ENST00000449224 SYTL4Q96C24 671 aaPredicted RBP31.54■■■□□ 2.64
CRTAP-202ENST00000449224 PTPRCP08575 1304 aa31.54■■■□□ 2.64
CRTAP-202ENST00000449224 PRIM1P49642 420 aaKnown RBP31.54■■■□□ 2.64
CRTAP-202ENST00000449224 G2E3Q7L622 706 aa31.54■■■□□ 2.64
CRTAP-202ENST00000449224 KCPQ6ZWJ8 1503 aa31.54■■■□□ 2.64
CRTAP-202ENST00000449224 ONECUT3O60422 494 aaPredicted RBP31.53■■■□□ 2.64
CRTAP-202ENST00000449224 CHPF2Q9P2E5 772 aa31.52■■■□□ 2.64
CRTAP-202ENST00000449224 MVPQ14764 893 aaKnown RBP31.52■■■□□ 2.64
CRTAP-202ENST00000449224 TMEM57Q8N5G2 664 aa31.51■■■□□ 2.63
CRTAP-202ENST00000449224 ASAP1Q9ULH1 1129 aa31.51■■■□□ 2.63
CRTAP-202ENST00000449224 ACSBG1Q96GR2 724 aa31.5■■■□□ 2.63
CRTAP-202ENST00000449224 ATG3Q9NT62 314 aa31.5■■■□□ 2.63
CRTAP-202ENST00000449224 CACNA1FO60840 1977 aa31.5■■■□□ 2.63
CRTAP-202ENST00000449224 ABCC4O15439 1325 aa31.5■■■□□ 2.63
CRTAP-202ENST00000449224 PTCD1O75127 700 aaKnown RBP31.49■■■□□ 2.63
CRTAP-202ENST00000449224 FLIIQ13045 1269 aa31.49■■■□□ 2.63
CRTAP-202ENST00000449224 B4GALNT3Q6L9W6 998 aa31.49■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms