RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 PHACTR3Q96KR7 559 aa18.92■□□□□ 0.62
RTFDC1-204ENST00000449062 RSPH6AQ9H0K4 717 aa18.91■□□□□ 0.62
RTFDC1-204ENST00000449062 SLC52A2Q9HAB3 445 aa18.9■□□□□ 0.62
RTFDC1-204ENST00000449062 ATP6V1AP38606 617 aa18.89■□□□□ 0.61
RTFDC1-204ENST00000449062 NUDCQ9Y266 331 aa18.89■□□□□ 0.61
RTFDC1-204ENST00000449062 FCHSD2O94868 740 aa18.88■□□□□ 0.61
RTFDC1-204ENST00000449062 SMIM5Q71RC9 77 aa18.88■□□□□ 0.61
RTFDC1-204ENST00000449062 IL17REQ8NFR9 667 aa18.88■□□□□ 0.61
RTFDC1-204ENST00000449062 PRKAR2BP31323 418 aa18.87■□□□□ 0.61
RTFDC1-204ENST00000449062 ZEB1P37275 1124 aaPredicted RBP18.87■□□□□ 0.61
RTFDC1-204ENST00000449062 QSER1Q2KHR3 1735 aa18.87■□□□□ 0.61
RTFDC1-204ENST00000449062 FLAD1Q8NFF5 587 aa18.87■□□□□ 0.61
RTFDC1-204ENST00000449062 PPP1R1BQ9UD71 204 aaPredicted RBP18.87■□□□□ 0.61
RTFDC1-204ENST00000449062 U2AF1L5P0DN76 240 aaPredicted RBP18.86■□□□□ 0.61
RTFDC1-204ENST00000449062 U2AF1Q01081 240 aaKnown RBP eCLIP18.86■□□□□ 0.61
RTFDC1-204ENST00000449062 TAF1LQ8IZX4 1826 aa18.86■□□□□ 0.61
RTFDC1-204ENST00000449062 RALBP1Q15311 655 aa18.85■□□□□ 0.61
RTFDC1-204ENST00000449062 RC3H1Q5TC82 1133 aaKnown RBP18.85■□□□□ 0.61
RTFDC1-204ENST00000449062 GAS2L2Q8NHY3 880 aa18.85■□□□□ 0.61
RTFDC1-204ENST00000449062 ARXQ96QS3 562 aa18.85■□□□□ 0.61
RTFDC1-204ENST00000449062 RBM42Q9BTD8 480 aaKnown RBP18.85■□□□□ 0.61
RTFDC1-204ENST00000449062 TUBGCP6Q96RT7 1819 aa18.84■□□□□ 0.61
RTFDC1-204ENST00000449062 GNAT3A8MTJ3 354 aa18.84■□□□□ 0.61
RTFDC1-204ENST00000449062 PTCD1O75127 700 aaKnown RBP18.84■□□□□ 0.61
RTFDC1-204ENST00000449062 AK7Q96M32 723 aa18.84■□□□□ 0.61
RTFDC1-204ENST00000449062 SYT17Q9BSW7 474 aa18.84■□□□□ 0.61
RTFDC1-204ENST00000449062 C5P01031 1676 aa18.84■□□□□ 0.61
RTFDC1-204ENST00000449062 ADAMTS7Q9UKP4 1686 aa18.83■□□□□ 0.61
RTFDC1-204ENST00000449062 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.83■□□□□ 0.6
RTFDC1-204ENST00000449062 SSFA2P28290 1259 aa18.83■□□□□ 0.6
RTFDC1-204ENST00000449062 FHDC1Q9C0D6 1143 aaPredicted RBP18.83■□□□□ 0.6
RTFDC1-204ENST00000449062 SCN11AQ9UI33 1791 aa18.83■□□□□ 0.6
RTFDC1-204ENST00000449062 C4BP0C0L5 1744 aa18.83■□□□□ 0.6
RTFDC1-204ENST00000449062 SLC39A6Q13433 755 aa18.82■□□□□ 0.6
RTFDC1-204ENST00000449062 COL24A1Q17RW2 1714 aa18.82■□□□□ 0.6
RTFDC1-204ENST00000449062 MRC1P22897 1456 aa18.82■□□□□ 0.6
RTFDC1-204ENST00000449062 MAP3K5Q99683 1374 aa18.81■□□□□ 0.6
RTFDC1-204ENST00000449062 ZNF831Q5JPB2 1677 aa18.81■□□□□ 0.6
RTFDC1-204ENST00000449062 CEMIPQ8WUJ3 1361 aa18.81■□□□□ 0.6
RTFDC1-204ENST00000449062 GNPATO15228 680 aa18.8■□□□□ 0.6
RTFDC1-204ENST00000449062 MSH5O43196 834 aa18.8■□□□□ 0.6
RTFDC1-204ENST00000449062 RPS6KA4O75676 772 aa18.8■□□□□ 0.6
RTFDC1-204ENST00000449062 PLEKHF1Q96S99 279 aa18.8■□□□□ 0.6
RTFDC1-204ENST00000449062 CNTNAP4Q9C0A0 1308 aa18.79■□□□□ 0.6
RTFDC1-204ENST00000449062 POLD1P28340 1107 aa18.79■□□□□ 0.6
RTFDC1-204ENST00000449062 PHF14O94880 888 aa18.78■□□□□ 0.6
RTFDC1-204ENST00000449062 MSL1Q68DK7 614 aa18.78■□□□□ 0.6
RTFDC1-204ENST00000449062 INTS5Q6P9B9 1019 aaKnown RBP18.78■□□□□ 0.6
RTFDC1-204ENST00000449062 UBR3Q6ZT12 1888 aa18.77■□□□□ 0.6
RTFDC1-204ENST00000449062 CRKLP46109 303 aaKnown RBP18.77■□□□□ 0.6
RTFDC1-204ENST00000449062 DNAJC10Q8IXB1 793 aa18.77■□□□□ 0.6
RTFDC1-204ENST00000449062 ARHGEF1Q92888 912 aaKnown RBP18.77■□□□□ 0.6
RTFDC1-204ENST00000449062 MYH14Q7Z406 1995 aaKnown RBP18.76■□□□□ 0.59
RTFDC1-204ENST00000449062 HTATSF1O43719 755 aaKnown RBP18.76■□□□□ 0.59
RTFDC1-204ENST00000449062 TRAPPC3LQ5T215 181 aa18.76■□□□□ 0.59
RTFDC1-204ENST00000449062 VSIG10Q8N0Z9 540 aa18.76■□□□□ 0.59
RTFDC1-204ENST00000449062 RTCBQ9Y3I0 505 aaKnown RBP18.76■□□□□ 0.59
RTFDC1-204ENST00000449062 CYP19A1P11511 503 aaPredicted RBP18.75■□□□□ 0.59
RTFDC1-204ENST00000449062 ADRA2BP18089 450 aa18.75■□□□□ 0.59
RTFDC1-204ENST00000449062 MYBBP1AQ9BQG0 1328 aaKnown RBP18.74■□□□□ 0.59
RTFDC1-204ENST00000449062 KCPQ6ZWJ8 1503 aa18.74■□□□□ 0.59
RTFDC1-204ENST00000449062 TEFQ10587 303 aa18.74■□□□□ 0.59
RTFDC1-204ENST00000449062 ZNF790Q6PG37 636 aa18.74■□□□□ 0.59
RTFDC1-204ENST00000449062 ZNF496Q96IT1 587 aaPredicted RBP18.74■□□□□ 0.59
RTFDC1-204ENST00000449062 PRKRIP1Q9H875 184 aaPredicted RBP18.74■□□□□ 0.59
RTFDC1-204ENST00000449062 KCNQ3O43525 872 aa18.73■□□□□ 0.59
RTFDC1-204ENST00000449062 MCM10Q7L590 875 aa18.73■□□□□ 0.59
RTFDC1-204ENST00000449062 DCTN1Q14203 1278 aa18.72■□□□□ 0.59
RTFDC1-204ENST00000449062 UTRNP46939 3433 aa18.72■□□□□ 0.59
RTFDC1-204ENST00000449062 COL5A3P25940 1745 aaPredicted RBP18.71■□□□□ 0.59
RTFDC1-204ENST00000449062 CICQ96RK0 1608 aaPredicted RBP18.71■□□□□ 0.59
RTFDC1-204ENST00000449062 GYS1P13807 737 aa18.71■□□□□ 0.59
RTFDC1-204ENST00000449062 CCDC87Q9NVE4 849 aa18.71■□□□□ 0.59
RTFDC1-204ENST00000449062 NLGN1Q8N2Q7 840 aa18.7■□□□□ 0.58
RTFDC1-204ENST00000449062 NLGN2Q8NFZ4 835 aa18.7■□□□□ 0.58
RTFDC1-204ENST00000449062 TJP1Q07157 1748 aa18.69■□□□□ 0.58
RTFDC1-204ENST00000449062 BTBD11A6QL63 1104 aa18.69■□□□□ 0.58
RTFDC1-204ENST00000449062 NFE2L2Q16236 605 aa18.69■□□□□ 0.58
RTFDC1-204ENST00000449062 TTC5Q8N0Z6 440 aa18.69■□□□□ 0.58
RTFDC1-204ENST00000449062 RTF1Q92541 710 aaKnown RBP18.69■□□□□ 0.58
RTFDC1-204ENST00000449062 CD2APQ9Y5K6 639 aa18.69■□□□□ 0.58
RTFDC1-204ENST00000449062 HEG1Q9ULI3 1381 aa18.68■□□□□ 0.58
RTFDC1-204ENST00000449062 VIRMAQ69YN4 1812 aaKnown RBP18.68■□□□□ 0.58
RTFDC1-204ENST00000449062 RFC4P35249 363 aa18.68■□□□□ 0.58
RTFDC1-204ENST00000449062 PNNQ9H307 717 aaKnown RBP18.68■□□□□ 0.58
RTFDC1-204ENST00000449062 SOS1Q07889 1333 aaPredicted RBP18.68■□□□□ 0.58
RTFDC1-204ENST00000449062 ZNF316A6NFI3 1004 aaPredicted RBP18.67■□□□□ 0.58
RTFDC1-204ENST00000449062 TAF7Q15545 349 aaPredicted RBP18.67■□□□□ 0.58
RTFDC1-204ENST00000449062 SRP68Q9UHB9 627 aaKnown RBP18.67■□□□□ 0.58
RTFDC1-204ENST00000449062 ZBTB1Q9Y2K1 713 aa18.67■□□□□ 0.58
RTFDC1-204ENST00000449062 SIPA1L3O60292 1781 aaPredicted RBP18.67■□□□□ 0.58
RTFDC1-204ENST00000449062 MMP10P09238 476 aa18.66■□□□□ 0.58
RTFDC1-204ENST00000449062 FMNL2Q96PY5 1086 aa18.66■□□□□ 0.58
RTFDC1-204ENST00000449062 TEX13AQ9BXU3 409 aaPredicted RBP18.66■□□□□ 0.58
RTFDC1-204ENST00000449062 USP42Q9H9J4 1324 aaKnown RBP18.66■□□□□ 0.58
RTFDC1-204ENST00000449062 UBR2Q8IWV8 1755 aa18.65■□□□□ 0.58
RTFDC1-204ENST00000449062 STARD3NLO95772 234 aa18.65■□□□□ 0.58
RTFDC1-204ENST00000449062 EIF5P55010 431 aaKnown RBP18.65■□□□□ 0.58
RTFDC1-204ENST00000449062 GOLGB1Q14789 3259 aaKnown RBP18.65■□□□□ 0.58
RTFDC1-204ENST00000449062 TM4SF1P30408 202 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms