RNA–Protein interactions for RNA: ENST00000447715.6

PPFIA4-204, Transcript of PTPRF interacting protein alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPFIA4, Length 6,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA4-204ENST00000447715 SYCE3A1L190 88 aa15.58■□□□□ 0.09
PPFIA4-204ENST00000447715 TMEM87AQ8NBN3 555 aa15.58■□□□□ 0.09
PPFIA4-204ENST00000447715 TRMT1Q9NXH9 659 aaKnown RBP15.58■□□□□ 0.09
PPFIA4-204ENST00000447715 PRPF4BQ13523 1007 aaKnown RBP15.58■□□□□ 0.09
PPFIA4-204ENST00000447715 TIGD1Q96MW7 591 aa15.58■□□□□ 0.09
PPFIA4-204ENST00000447715 WDR78Q5VTH9 848 aa15.58■□□□□ 0.08
PPFIA4-204ENST00000447715 ZHX1Q9UKY1 873 aaPredicted RBP15.58■□□□□ 0.08
PPFIA4-204ENST00000447715 GNAI2P04899 355 aa15.58■□□□□ 0.08
PPFIA4-204ENST00000447715 MAATS1Q7Z4T9 603 aa15.58■□□□□ 0.08
PPFIA4-204ENST00000447715 STRN4Q9NRL3 753 aa15.58■□□□□ 0.08
PPFIA4-204ENST00000447715 ARL1P40616 181 aaPredicted RBP15.58■□□□□ 0.08
PPFIA4-204ENST00000447715 DAAM2Q86T65 1068 aa15.58■□□□□ 0.08
PPFIA4-204ENST00000447715 FKBP15Q5T1M5 1219 aa15.57■□□□□ 0.08
PPFIA4-204ENST00000447715 TRMT1LQ7Z2T5 733 aaKnown RBP15.57■□□□□ 0.08
PPFIA4-204ENST00000447715 FBF1Q8TES7 1133 aa15.57■□□□□ 0.08
PPFIA4-204ENST00000447715 PABPN1LA6NDY0 278 aaKnown RBP15.57■□□□□ 0.08
PPFIA4-204ENST00000447715 TDRD12Q587J7 1177 aaKnown RBP15.57■□□□□ 0.08
PPFIA4-204ENST00000447715 PLCD3Q8N3E9 789 aa15.57■□□□□ 0.08
PPFIA4-204ENST00000447715 ATF3P18847 181 aa15.57■□□□□ 0.08
PPFIA4-204ENST00000447715 CWC27Q6UX04 472 aaKnown RBP15.57■□□□□ 0.08
PPFIA4-204ENST00000447715 ESPNB1AK53 854 aa15.57■□□□□ 0.08
PPFIA4-204ENST00000447715 CLGNO14967 610 aa15.57■□□□□ 0.08
PPFIA4-204ENST00000447715 SPTY2D1Q68D10 685 aaPredicted RBP15.57■□□□□ 0.08
PPFIA4-204ENST00000447715 BLOC1S2Q6QNY1 142 aa15.57■□□□□ 0.08
PPFIA4-204ENST00000447715 MYL6BP14649 208 aa15.56■□□□□ 0.08
PPFIA4-204ENST00000447715 C6orf163Q5TEZ5 329 aa15.56■□□□□ 0.08
PPFIA4-204ENST00000447715 CTR9Q6PD62 1173 aa15.56■□□□□ 0.08
PPFIA4-204ENST00000447715 PPP1R14CQ8TAE6 165 aa15.56■□□□□ 0.08
PPFIA4-204ENST00000447715 CDKL5O76039 1030 aa15.56■□□□□ 0.08
PPFIA4-204ENST00000447715 SMARCC1Q92922 1105 aaPredicted RBP15.56■□□□□ 0.08
PPFIA4-204ENST00000447715 FERMT2Q96AC1 680 aa15.56■□□□□ 0.08
PPFIA4-204ENST00000447715 SFPQP23246 707 aaKnown RBP eCLIP15.56■□□□□ 0.08
PPFIA4-204ENST00000447715 TSG101Q99816 390 aa15.56■□□□□ 0.08
PPFIA4-204ENST00000447715 MXRA7P84157 204 aa15.55■□□□□ 0.08
PPFIA4-204ENST00000447715 MPHOSPH8Q99549 860 aa15.55■□□□□ 0.08
PPFIA4-204ENST00000447715 NOB1Q9ULX3 412 aaKnown RBP15.55■□□□□ 0.08
PPFIA4-204ENST00000447715 CUL7Q14999 1698 aa15.55■□□□□ 0.08
PPFIA4-204ENST00000447715 MAP3K11Q16584 847 aa15.55■□□□□ 0.08
PPFIA4-204ENST00000447715 GIGYF2Q6Y7W6 1299 aaKnown RBP15.55■□□□□ 0.08
PPFIA4-204ENST00000447715 NUP88Q99567 741 aaPredicted RBP15.55■□□□□ 0.08
PPFIA4-204ENST00000447715 ARAP1Q96P48 1450 aa15.55■□□□□ 0.08
PPFIA4-204ENST00000447715 ZSCAN12O43309 604 aa15.55■□□□□ 0.08
PPFIA4-204ENST00000447715 PPP4R3AQ6IN85 833 aa15.55■□□□□ 0.08
PPFIA4-204ENST00000447715 PAXIP1Q6ZW49 1069 aaPredicted RBP15.55■□□□□ 0.08
PPFIA4-204ENST00000447715 AACSQ86V21 672 aa15.55■□□□□ 0.08
PPFIA4-204ENST00000447715 CCDC85AQ96PX6 553 aaPredicted RBP15.55■□□□□ 0.08
PPFIA4-204ENST00000447715 CALCOCO1Q9P1Z2 691 aa15.55■□□□□ 0.08
PPFIA4-204ENST00000447715 FSD2A1L4K1 749 aa15.54■□□□□ 0.08
PPFIA4-204ENST00000447715 PAFAH1B1P43034 410 aa15.54■□□□□ 0.08
PPFIA4-204ENST00000447715 LMAN1P49257 510 aa15.54■□□□□ 0.08
PPFIA4-204ENST00000447715 PAIP2Q9BPZ3 127 aaKnown RBP15.54■□□□□ 0.08
PPFIA4-204ENST00000447715 DNAI2Q9GZS0 605 aa15.54■□□□□ 0.08
PPFIA4-204ENST00000447715 MNAT1P51948 309 aa15.54■□□□□ 0.08
PPFIA4-204ENST00000447715 MRPS9P82933 396 aaKnown RBP15.54■□□□□ 0.08
PPFIA4-204ENST00000447715 FERMT3Q86UX7 667 aa15.54■□□□□ 0.08
PPFIA4-204ENST00000447715 STAC3Q96MF2 364 aa15.54■□□□□ 0.08
PPFIA4-204ENST00000447715 TSNARE1Q96NA8 513 aa15.54■□□□□ 0.08
PPFIA4-204ENST00000447715 RRBP1Q9P2E9 1410 aaKnown RBP15.54■□□□□ 0.08
PPFIA4-204ENST00000447715 CABP2Q9NPB3 220 aa15.54■□□□□ 0.08
PPFIA4-204ENST00000447715 EXOSC9Q06265 439 aaKnown RBP15.53■□□□□ 0.08
PPFIA4-204ENST00000447715 VPS36Q86VN1 386 aa15.53■□□□□ 0.08
PPFIA4-204ENST00000447715 TOP1P11387 765 aaKnown RBP15.53■□□□□ 0.08
PPFIA4-204ENST00000447715 KIF18AQ8NI77 898 aa15.53■□□□□ 0.08
PPFIA4-204ENST00000447715 FEZ1Q99689 392 aa15.53■□□□□ 0.08
PPFIA4-204ENST00000447715 SUPT6HQ7KZ85 1726 aaKnown RBP15.53■□□□□ 0.08
PPFIA4-204ENST00000447715 NLRP6P59044 892 aa15.53■□□□□ 0.08
PPFIA4-204ENST00000447715 SPECC1LQ69YQ0 1117 aa15.53■□□□□ 0.08
PPFIA4-204ENST00000447715 NAP1L3Q99457 506 aaPredicted RBP15.53■□□□□ 0.08
PPFIA4-204ENST00000447715 CCDC6Q16204 474 aa15.53■□□□□ 0.08
PPFIA4-204ENST00000447715 BICDL1Q6ZP65 573 aa15.53■□□□□ 0.08
PPFIA4-204ENST00000447715 TNIP1Q15025 636 aa15.52■□□□□ 0.08
PPFIA4-204ENST00000447715 RAB3IL1Q8TBN0 382 aa15.52■□□□□ 0.08
PPFIA4-204ENST00000447715 MCM3P25205 808 aa15.52■□□□□ 0.08
PPFIA4-204ENST00000447715 CCDC150Q8NCX0 1101 aa15.52■□□□□ 0.08
PPFIA4-204ENST00000447715 SLC4A2P04920 1241 aa15.52■□□□□ 0.08
PPFIA4-204ENST00000447715 PUF60Q9UHX1 559 aaKnown RBP15.52■□□□□ 0.08
PPFIA4-204ENST00000447715 XPCQ01831 940 aaPredicted RBP15.52■□□□□ 0.07
PPFIA4-204ENST00000447715 LRP2BPQ9P2M1 347 aa15.52■□□□□ 0.07
PPFIA4-204ENST00000447715 CEP131Q9UPN4 1083 aa15.52■□□□□ 0.07
PPFIA4-204ENST00000447715 SSX2IPQ9Y2D8 614 aa15.52■□□□□ 0.07
PPFIA4-204ENST00000447715 GUCY1B3Q02153 619 aa15.51■□□□□ 0.07
PPFIA4-204ENST00000447715 TWISTNBQ3B726 338 aaPredicted RBP15.51■□□□□ 0.07
PPFIA4-204ENST00000447715 ZSCAN25Q6NSZ9 544 aa15.51■□□□□ 0.07
PPFIA4-204ENST00000447715 PSMC4P43686 418 aa15.51■□□□□ 0.07
PPFIA4-204ENST00000447715 TAOK3Q9H2K8 898 aa15.51■□□□□ 0.07
PPFIA4-204ENST00000447715 ZSWIM4Q9H7M6 989 aa15.51■□□□□ 0.07
PPFIA4-204ENST00000447715 BCAR3O75815 825 aa15.51■□□□□ 0.07
PPFIA4-204ENST00000447715 IDH1O75874 414 aaKnown RBP15.51■□□□□ 0.07
PPFIA4-204ENST00000447715 ZBTB9Q96C00 473 aa15.51■□□□□ 0.07
PPFIA4-204ENST00000447715 A0A1W2PRG0 241 aa15.51■□□□□ 0.07
PPFIA4-204ENST00000447715 USO1O60763 962 aaKnown RBP15.51■□□□□ 0.07
PPFIA4-204ENST00000447715 DDX54Q8TDD1 881 aaKnown RBP15.51■□□□□ 0.07
PPFIA4-204ENST00000447715 CDCA7LQ96GN5 454 aa15.51■□□□□ 0.07
PPFIA4-204ENST00000447715 TERF1P54274 439 aa15.5■□□□□ 0.07
PPFIA4-204ENST00000447715 SEC63Q9UGP8 760 aaKnown RBP15.5■□□□□ 0.07
PPFIA4-204ENST00000447715 MIA2Q96PC5 1412 aa15.5■□□□□ 0.07
PPFIA4-204ENST00000447715 CA8P35219 290 aa15.5■□□□□ 0.07
PPFIA4-204ENST00000447715 NOP2P46087 812 aaKnown RBP15.5■□□□□ 0.07
PPFIA4-204ENST00000447715 C16orf45Q96MC5 204 aaPredicted RBP15.5■□□□□ 0.07
PPFIA4-204ENST00000447715 CLIP2Q9UDT6 1046 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms