RNA–Protein interactions for RNA: ENST00000447375.1

SSR4-205, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-205ENST00000447375 SMC1BQ8NDV3 1235 aa17.23■□□□□ 0.35
SSR4-205ENST00000447375 A0A1W2PP64 1363 aa17.23■□□□□ 0.35
SSR4-205ENST00000447375 PLEKHG2Q9H7P9 1386 aa17.23■□□□□ 0.35
SSR4-205ENST00000447375 UBR3Q6ZT12 1888 aa17.22■□□□□ 0.35
SSR4-205ENST00000447375 COG3Q96JB2 828 aa17.22■□□□□ 0.35
SSR4-205ENST00000447375 KCPQ6ZWJ8 1503 aa17.21■□□□□ 0.35
SSR4-205ENST00000447375 GNPATO15228 680 aa17.21■□□□□ 0.35
SSR4-205ENST00000447375 LOC102724428A0A0B4J2F2 783 aa17.2■□□□□ 0.34
SSR4-205ENST00000447375 SIK1P57059 783 aa17.2■□□□□ 0.34
SSR4-205ENST00000447375 PIGBQ92521 554 aa17.2■□□□□ 0.34
SSR4-205ENST00000447375 N4BP2Q86UW6 1770 aaPredicted RBP17.2■□□□□ 0.34
SSR4-205ENST00000447375 NLGN1Q8N2Q7 840 aa17.19■□□□□ 0.34
SSR4-205ENST00000447375 CCDC87Q9NVE4 849 aa17.19■□□□□ 0.34
SSR4-205ENST00000447375 C10orf71Q711Q0 1435 aa17.19■□□□□ 0.34
SSR4-205ENST00000447375 KIAA1551Q9HCM1 1747 aa17.18■□□□□ 0.34
SSR4-205ENST00000447375 CYP27B1O15528 508 aa17.18■□□□□ 0.34
SSR4-205ENST00000447375 RNF181Q9P0P0 153 aa17.18■□□□□ 0.34
SSR4-205ENST00000447375 KIF20BQ96Q89 1820 aa17.18■□□□□ 0.34
SSR4-205ENST00000447375 KIF13BQ9NQT8 1826 aa17.17■□□□□ 0.34
SSR4-205ENST00000447375 KCNA3P22001 575 aa17.17■□□□□ 0.34
SSR4-205ENST00000447375 ATP6V1AP38606 617 aa17.17■□□□□ 0.34
SSR4-205ENST00000447375 ITPK1Q13572 414 aa17.17■□□□□ 0.34
SSR4-205ENST00000447375 TRAPPC3LQ5T215 181 aa17.17■□□□□ 0.34
SSR4-205ENST00000447375 RRS1Q15050 365 aaKnown RBP17.16■□□□□ 0.34
SSR4-205ENST00000447375 PIM2Q9P1W9 311 aa17.16■□□□□ 0.34
SSR4-205ENST00000447375 SMG6Q86US8 1419 aaKnown RBP17.15■□□□□ 0.34
SSR4-205ENST00000447375 DCAF5Q96JK2 942 aa17.15■□□□□ 0.34
SSR4-205ENST00000447375 CARD14Q9BXL6 1004 aa17.15■□□□□ 0.34
SSR4-205ENST00000447375 PARP3Q9Y6F1 533 aa17.15■□□□□ 0.34
SSR4-205ENST00000447375 RTL1A6NKG5 1358 aa17.15■□□□□ 0.34
SSR4-205ENST00000447375 DALRD3Q5D0E6 543 aaKnown RBP17.14■□□□□ 0.33
SSR4-205ENST00000447375 RTCBQ9Y3I0 505 aaKnown RBP17.14■□□□□ 0.33
SSR4-205ENST00000447375 POLR3GLQ9BT43 218 aa17.13■□□□□ 0.33
SSR4-205ENST00000447375 ASAP1Q9ULH1 1129 aa17.13■□□□□ 0.33
SSR4-205ENST00000447375 FYB1O15117 783 aa17.12■□□□□ 0.33
SSR4-205ENST00000447375 NKX1-1Q15270 411 aaPredicted RBP17.12■□□□□ 0.33
SSR4-205ENST00000447375 TMOD3Q9NYL9 352 aa17.12■□□□□ 0.33
SSR4-205ENST00000447375 ITGB4P16144 1822 aa17.12■□□□□ 0.33
SSR4-205ENST00000447375 PKD1L3Q7Z443 1732 aa17.11■□□□□ 0.33
SSR4-205ENST00000447375 VEGFAP15692 232 aaPredicted RBP17.11■□□□□ 0.33
SSR4-205ENST00000447375 HSP90AB2PQ58FF8 381 aa17.11■□□□□ 0.33
SSR4-205ENST00000447375 ARHGEF1Q92888 912 aaKnown RBP17.11■□□□□ 0.33
SSR4-205ENST00000447375 MAP2P11137 1827 aaKnown RBP17.11■□□□□ 0.33
SSR4-205ENST00000447375 TNRC6CQ9HCJ0 1690 aaKnown RBP17.1■□□□□ 0.33
SSR4-205ENST00000447375 GYS1P13807 737 aa17.1■□□□□ 0.33
SSR4-205ENST00000447375 RFC4P35249 363 aa17.09■□□□□ 0.33
SSR4-205ENST00000447375 KIF7Q2M1P5 1343 aa17.09■□□□□ 0.33
SSR4-205ENST00000447375 BRCA1P38398 1863 aaKnown RBP17.08■□□□□ 0.33
SSR4-205ENST00000447375 ADRA2BP18089 450 aa17.08■□□□□ 0.32
SSR4-205ENST00000447375 GGNBP2Q9H3C7 697 aa17.08■□□□□ 0.32
SSR4-205ENST00000447375 PANK3Q9H999 370 aa17.08■□□□□ 0.32
SSR4-205ENST00000447375 ATG3Q9NT62 314 aa17.08■□□□□ 0.32
SSR4-205ENST00000447375 SPG7Q9UQ90 795 aa17.08■□□□□ 0.32
SSR4-205ENST00000447375 ARFGEF1Q9Y6D6 1849 aa17.07■□□□□ 0.32
SSR4-205ENST00000447375 C4AP0C0L4 1744 aa17.07■□□□□ 0.32
SSR4-205ENST00000447375 INSRP06213 1382 aa17.07■□□□□ 0.32
SSR4-205ENST00000447375 ZC3H4Q9UPT8 1303 aaKnown RBP17.07■□□□□ 0.32
SSR4-205ENST00000447375 PCDH10Q9P2E7 1040 aa17.07■□□□□ 0.32
SSR4-205ENST00000447375 GLTPD2A6NH11 291 aa17.06■□□□□ 0.32
SSR4-205ENST00000447375 CHRNA5P30532 468 aa17.05■□□□□ 0.32
SSR4-205ENST00000447375 RC3H1Q5TC82 1133 aaKnown RBP17.05■□□□□ 0.32
SSR4-205ENST00000447375 PRDM10Q9NQV6 1147 aa17.05■□□□□ 0.32
SSR4-205ENST00000447375 FOXN1O15353 648 aa17.04■□□□□ 0.32
SSR4-205ENST00000447375 RPS6KA4O75676 772 aa17.04■□□□□ 0.32
SSR4-205ENST00000447375 RASSF7Q02833 373 aa17.04■□□□□ 0.32
SSR4-205ENST00000447375 MKRN1Q9UHC7 482 aaKnown RBP17.04■□□□□ 0.32
SSR4-205ENST00000447375 SLC4A9Q96Q91 983 aa17.03■□□□□ 0.32
SSR4-205ENST00000447375 RBM42Q9BTD8 480 aaKnown RBP17.03■□□□□ 0.32
SSR4-205ENST00000447375 FLT4P35916 1363 aa17.02■□□□□ 0.32
SSR4-205ENST00000447375 WASHC2AQ641Q2 1341 aa17.02■□□□□ 0.32
SSR4-205ENST00000447375 LMNB1P20700 586 aa17.02■□□□□ 0.32
SSR4-205ENST00000447375 IFNL2Q8IZJ0 200 aa17.02■□□□□ 0.32
SSR4-205ENST00000447375 CREBZFQ9NS37 354 aa17.02■□□□□ 0.32
SSR4-205ENST00000447375 ANKRD26Q9UPS8 1709 aa17.01■□□□□ 0.31
SSR4-205ENST00000447375 SBF1O95248 1867 aa17.01■□□□□ 0.31
SSR4-205ENST00000447375 CNTNAP4Q9C0A0 1308 aa17.01■□□□□ 0.31
SSR4-205ENST00000447375 KDRP35968 1356 aa17.01■□□□□ 0.31
SSR4-205ENST00000447375 PHKG2P15735 406 aa17■□□□□ 0.31
SSR4-205ENST00000447375 DDR1Q08345 913 aa17■□□□□ 0.31
SSR4-205ENST00000447375 FKBP8Q14318 412 aa17■□□□□ 0.31
SSR4-205ENST00000447375 FAM161AQ3B820 660 aa17■□□□□ 0.31
SSR4-205ENST00000447375 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17■□□□□ 0.31
SSR4-205ENST00000447375 KIF24Q5T7B8 1368 aa17■□□□□ 0.31
SSR4-205ENST00000447375 KDM6AO15550 1401 aaPredicted RBP16.99■□□□□ 0.31
SSR4-205ENST00000447375 POTECB2RU33 542 aa16.99■□□□□ 0.31
SSR4-205ENST00000447375 ZEB1P37275 1124 aaPredicted RBP16.99■□□□□ 0.31
SSR4-205ENST00000447375 CTCFP49711 727 aaPredicted RBP16.99■□□□□ 0.31
SSR4-205ENST00000447375 AIDAQ96BJ3 306 aa16.99■□□□□ 0.31
SSR4-205ENST00000447375 PER1O15534 1290 aaPredicted RBP16.98■□□□□ 0.31
SSR4-205ENST00000447375 SRP68Q9UHB9 627 aaKnown RBP16.98■□□□□ 0.31
SSR4-205ENST00000447375 KNSTRNQ9Y448 316 aa16.98■□□□□ 0.31
SSR4-205ENST00000447375 DPY19L2Q6NUT2 758 aa16.97■□□□□ 0.31
SSR4-205ENST00000447375 POLRMTO00411 1230 aaKnown RBP16.95■□□□□ 0.3
SSR4-205ENST00000447375 TM4SF1P30408 202 aa16.95■□□□□ 0.3
SSR4-205ENST00000447375 AMER1Q5JTC6 1135 aaPredicted RBP16.95■□□□□ 0.3
SSR4-205ENST00000447375 CHADLQ6NUI6 762 aa16.95■□□□□ 0.3
SSR4-205ENST00000447375 ABHD8Q96I13 439 aa16.95■□□□□ 0.3
SSR4-205ENST00000447375 EMILIN1Q9Y6C2 1016 aa16.95■□□□□ 0.3
SSR4-205ENST00000447375 NCAPD2Q15021 1401 aa16.95■□□□□ 0.3
SSR4-205ENST00000447375 USP42Q9H9J4 1324 aaKnown RBP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms