RNA–Protein interactions for RNA: ENST00000443047.6

CHFR-204, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 2,990 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-204ENST00000443047 PLEKHG3A1L390 1219 aa18.52■□□□□ 0.56
CHFR-204ENST00000443047 MYRIPQ8NFW9 859 aa18.52■□□□□ 0.56
CHFR-204ENST00000443047 CGNQ9P2M7 1197 aaKnown RBP18.52■□□□□ 0.56
CHFR-204ENST00000443047 USP6P35125 1406 aa18.52■□□□□ 0.56
CHFR-204ENST00000443047 CFAP44Q96MT7 982 aa18.52■□□□□ 0.56
CHFR-204ENST00000443047 KCNA6P17658 529 aa18.51■□□□□ 0.55
CHFR-204ENST00000443047 DLG5Q8TDM6 1919 aa18.51■□□□□ 0.55
CHFR-204ENST00000443047 AKAP12Q02952 1782 aa18.51■□□□□ 0.55
CHFR-204ENST00000443047 KIF20AO95235 890 aa18.51■□□□□ 0.55
CHFR-204ENST00000443047 MCM5P33992 734 aa18.51■□□□□ 0.55
CHFR-204ENST00000443047 TPRNQ4KMQ1 711 aa18.51■□□□□ 0.55
CHFR-204ENST00000443047 MAP3K19Q56UN5 1328 aa18.51■□□□□ 0.55
CHFR-204ENST00000443047 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.51■□□□□ 0.55
CHFR-204ENST00000443047 IBTKQ9P2D0 1353 aaPredicted RBP18.5■□□□□ 0.55
CHFR-204ENST00000443047 PDIA4P13667 645 aaKnown RBP18.5■□□□□ 0.55
CHFR-204ENST00000443047 HDAC1Q13547 482 aaPredicted RBP18.5■□□□□ 0.55
CHFR-204ENST00000443047 GPT2Q8TD30 523 aa18.5■□□□□ 0.55
CHFR-204ENST00000443047 LETM1O95202 739 aaPredicted RBP18.49■□□□□ 0.55
CHFR-204ENST00000443047 ZBTB7BO15156 539 aaPredicted RBP18.48■□□□□ 0.55
CHFR-204ENST00000443047 ANKRD45Q5TZF3 282 aa18.48■□□□□ 0.55
CHFR-204ENST00000443047 C14orf37Q86TY3 774 aa18.48■□□□□ 0.55
CHFR-204ENST00000443047 TMEM51Q9NW97 253 aa18.48■□□□□ 0.55
CHFR-204ENST00000443047 OVOS2A0A0J9YW53 1432 aa18.48■□□□□ 0.55
CHFR-204ENST00000443047 OVOS2Q6IE36 1432 aa18.48■□□□□ 0.55
CHFR-204ENST00000443047 TMEM63CQ9P1W3 806 aa18.48■□□□□ 0.55
CHFR-204ENST00000443047 NSFL1CQ9UNZ2 370 aaKnown RBP18.48■□□□□ 0.55
CHFR-204ENST00000443047 THEMISQ8N1K5 641 aaPredicted RBP18.48■□□□□ 0.55
CHFR-204ENST00000443047 LTV1Q96GA3 475 aaPredicted RBP18.48■□□□□ 0.55
CHFR-204ENST00000443047 ZNF771Q7L3S4 317 aaPredicted RBP18.47■□□□□ 0.55
CHFR-204ENST00000443047 TBX22Q9Y458 520 aa18.47■□□□□ 0.55
CHFR-204ENST00000443047 RGPD8O14715 1765 aaPredicted RBP18.47■□□□□ 0.55
CHFR-204ENST00000443047 NLRP6P59044 892 aa18.47■□□□□ 0.55
CHFR-204ENST00000443047 KIF3AQ9Y496 699 aa18.47■□□□□ 0.55
CHFR-204ENST00000443047 LMOD3Q0VAK6 560 aa18.46■□□□□ 0.55
CHFR-204ENST00000443047 AMPHP49418 695 aa18.46■□□□□ 0.55
CHFR-204ENST00000443047 LRSAM1Q6UWE0 723 aa18.46■□□□□ 0.55
CHFR-204ENST00000443047 TBC1D9Q6ZT07 1266 aa18.46■□□□□ 0.55
CHFR-204ENST00000443047 PEAK1Q9H792 1746 aa18.46■□□□□ 0.55
CHFR-204ENST00000443047 NUCB2P80303 420 aa18.45■□□□□ 0.54
CHFR-204ENST00000443047 FOXD4L6Q3SYB3 417 aaPredicted RBP18.45■□□□□ 0.54
CHFR-204ENST00000443047 FOXD4L3Q6VB84 417 aaPredicted RBP18.45■□□□□ 0.54
CHFR-204ENST00000443047 U2AF2P26368 475 aaKnown RBP eCLIP18.45■□□□□ 0.542e-6■■■■■ 27.8
CHFR-204ENST00000443047 CHD1LQ86WJ1 897 aa18.45■□□□□ 0.54
CHFR-204ENST00000443047 PDCL2Q8N4E4 241 aa18.45■□□□□ 0.54
CHFR-204ENST00000443047 CDK11BP21127 795 aaKnown RBP18.45■□□□□ 0.54
CHFR-204ENST00000443047 MTHFSDQ2M296 383 aaKnown RBP18.45■□□□□ 0.54
CHFR-204ENST00000443047 SIRT2Q8IXJ6 389 aa18.45■□□□□ 0.54
CHFR-204ENST00000443047 TTC12Q9H892 705 aaPredicted RBP18.45■□□□□ 0.54
CHFR-204ENST00000443047 ZGPATQ8N5A5 531 aaKnown RBP18.44■□□□□ 0.54
CHFR-204ENST00000443047 PLCB2Q00722 1185 aa18.43■□□□□ 0.54
CHFR-204ENST00000443047 NOLC1Q14978 699 aaKnown RBP eCLIP18.43■□□□□ 0.54
CHFR-204ENST00000443047 CLEC17AQ6ZS10 378 aa18.43■□□□□ 0.54
CHFR-204ENST00000443047 EYA1Q99502 592 aa18.43■□□□□ 0.54
CHFR-204ENST00000443047 HMGN5P82970 282 aaKnown RBP18.42■□□□□ 0.54
CHFR-204ENST00000443047 NUCB1Q02818 461 aa18.42■□□□□ 0.54
CHFR-204ENST00000443047 BCL2L12Q9HB09 334 aa18.42■□□□□ 0.54
CHFR-204ENST00000443047 NRKQ7Z2Y5 1582 aa18.42■□□□□ 0.54
CHFR-204ENST00000443047 RIMS1Q86UR5 1692 aaKnown RBP18.42■□□□□ 0.54
CHFR-204ENST00000443047 TOPAZ1Q8N9V7 1692 aa18.41■□□□□ 0.54
CHFR-204ENST00000443047 USHBP1Q8N6Y0 703 aa18.41■□□□□ 0.54
CHFR-204ENST00000443047 PRIMPOLQ96LW4 560 aa18.41■□□□□ 0.54
CHFR-204ENST00000443047 SSH2Q76I76 1423 aa18.41■□□□□ 0.54
CHFR-204ENST00000443047 BRPF1P55201 1214 aaPredicted RBP18.41■□□□□ 0.54
CHFR-204ENST00000443047 NECTIN2Q92692 538 aa18.41■□□□□ 0.54
CHFR-204ENST00000443047 ZNF428Q96B54 188 aa18.41■□□□□ 0.54
CHFR-204ENST00000443047 ABCC4O15439 1325 aa18.41■□□□□ 0.54
CHFR-204ENST00000443047 FER1L4A9Z1Z3 1794 aa18.4■□□□□ 0.54
CHFR-204ENST00000443047 BMP2KLQ5H9B9 411 aa18.4■□□□□ 0.54
CHFR-204ENST00000443047 ABTB2Q8N961 1025 aa18.4■□□□□ 0.54
CHFR-204ENST00000443047 ARHGAP23Q9P227 1491 aa18.4■□□□□ 0.54
CHFR-204ENST00000443047 USP31Q70CQ4 1352 aa18.4■□□□□ 0.54
CHFR-204ENST00000443047 DIP2AQ14689 1571 aa18.39■□□□□ 0.54
CHFR-204ENST00000443047 APBB1O00213 710 aa18.39■□□□□ 0.54
CHFR-204ENST00000443047 CHL1O00533 1208 aa18.39■□□□□ 0.54
CHFR-204ENST00000443047 PTCH1Q13635 1447 aa18.39■□□□□ 0.53
CHFR-204ENST00000443047 SLIT1O75093 1534 aa18.39■□□□□ 0.53
CHFR-204ENST00000443047 ARHGAP45Q92619 1136 aa18.39■□□□□ 0.53
CHFR-204ENST00000443047 AEBP2Q6ZN18 517 aaPredicted RBP18.38■□□□□ 0.53
CHFR-204ENST00000443047 TSPY26PQ9H489 355 aa18.37■□□□□ 0.53
CHFR-204ENST00000443047 USP25Q9UHP3 1055 aa18.37■□□□□ 0.53
CHFR-204ENST00000443047 F6X3S4 739 aa18.37■□□□□ 0.53
CHFR-204ENST00000443047 SLC4A2P04920 1241 aa18.37■□□□□ 0.53
CHFR-204ENST00000443047 G2E3Q7L622 706 aa18.37■□□□□ 0.53
CHFR-204ENST00000443047 RTF1Q92541 710 aaKnown RBP18.36■□□□□ 0.53
CHFR-204ENST00000443047 API5Q9BZZ5 524 aaKnown RBP18.36■□□□□ 0.53
CHFR-204ENST00000443047 TSPYL4Q9UJ04 414 aa18.36■□□□□ 0.53
CHFR-204ENST00000443047 TTC21AQ8NDW8 1320 aa18.36■□□□□ 0.53
CHFR-204ENST00000443047 PIBF1Q8WXW3 757 aa18.36■□□□□ 0.53
CHFR-204ENST00000443047 CEP170BQ9Y4F5 1589 aaPredicted RBP18.36■□□□□ 0.53
CHFR-204ENST00000443047 AK9Q5TCS8 1911 aa18.36■□□□□ 0.53
CHFR-204ENST00000443047 FLT4P35916 1363 aa18.36■□□□□ 0.53
CHFR-204ENST00000443047 SLC4A10Q6U841 1118 aa18.35■□□□□ 0.53
CHFR-204ENST00000443047 IPO4Q8TEX9 1081 aaKnown RBP18.35■□□□□ 0.53
CHFR-204ENST00000443047 PIK3R4Q99570 1358 aa18.35■□□□□ 0.53
CHFR-204ENST00000443047 SBNO1A3KN83 1393 aa18.34■□□□□ 0.53
CHFR-204ENST00000443047 C16orf71Q8IYS4 520 aaPredicted RBP18.34■□□□□ 0.53
CHFR-204ENST00000443047 ZDHHC9Q9Y397 364 aa18.34■□□□□ 0.53
CHFR-204ENST00000443047 SETD1BQ9UPS6 1966 aaKnown RBP18.34■□□□□ 0.53
CHFR-204ENST00000443047 HOXC9P31274 260 aa18.34■□□□□ 0.53
CHFR-204ENST00000443047 KCNJ4P48050 445 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms