RNA–Protein interactions for RNA: ENST00000442441.5

TMEM50B-204, Transcript of transmembrane protein 50B, humanhuman

TSL 1 (best)

Gene TMEM50B, Length 982 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-204ENST00000442441 MMP10P09238 476 aa28.28■■■□□ 2.12
TMEM50B-204ENST00000442441 EIF4A2Q14240 407 aaKnown RBP28.25■■■□□ 2.11
TMEM50B-204ENST00000442441 CICQ96RK0 1608 aaPredicted RBP28.25■■■□□ 2.11
TMEM50B-204ENST00000442441 PLEKHG2Q9H7P9 1386 aa28.24■■■□□ 2.11
TMEM50B-204ENST00000442441 KDRP35968 1356 aa28.24■■■□□ 2.11
TMEM50B-204ENST00000442441 PXDNLA1KZ92 1463 aa28.23■■■□□ 2.11
TMEM50B-204ENST00000442441 TRAPPC3LQ5T215 181 aa28.23■■■□□ 2.11
TMEM50B-204ENST00000442441 RTCBQ9Y3I0 505 aaKnown RBP28.23■■■□□ 2.11
TMEM50B-204ENST00000442441 KIF3CO14782 793 aa28.22■■■□□ 2.11
TMEM50B-204ENST00000442441 NLGN1Q8N2Q7 840 aa28.22■■■□□ 2.11
TMEM50B-204ENST00000442441 KIF13BQ9NQT8 1826 aa28.22■■■□□ 2.11
TMEM50B-204ENST00000442441 ERVV-2B6SEH9 535 aa28.21■■■□□ 2.11
TMEM50B-204ENST00000442441 TNNT2P45379 298 aaPredicted RBP28.21■■■□□ 2.11
TMEM50B-204ENST00000442441 TGFB2P61812 414 aa28.21■■■□□ 2.11
TMEM50B-204ENST00000442441 SLC4A9Q96Q91 983 aa28.2■■■□□ 2.1
TMEM50B-204ENST00000442441 RBM42Q9BTD8 480 aaKnown RBP28.2■■■□□ 2.1
TMEM50B-204ENST00000442441 ZNF831Q5JPB2 1677 aa28.19■■■□□ 2.1
TMEM50B-204ENST00000442441 KIAA1551Q9HCM1 1747 aa28.19■■■□□ 2.1
TMEM50B-204ENST00000442441 HSP90AB1P08238 724 aaKnown RBP28.18■■■□□ 2.1
TMEM50B-204ENST00000442441 ADRA2BP18089 450 aa28.18■■■□□ 2.1
TMEM50B-204ENST00000442441 RC3H1Q5TC82 1133 aaKnown RBP28.18■■■□□ 2.1
TMEM50B-204ENST00000442441 DCAF5Q96JK2 942 aa28.18■■■□□ 2.1
TMEM50B-204ENST00000442441 N4BP2Q86UW6 1770 aaPredicted RBP28.17■■■□□ 2.1
TMEM50B-204ENST00000442441 A0A0G2JLW4 131 aa28.17■■■□□ 2.1
TMEM50B-204ENST00000442441 ARHGEF1Q92888 912 aaKnown RBP28.17■■■□□ 2.1
TMEM50B-204ENST00000442441 BCS1LQ9Y276 419 aa28.17■■■□□ 2.1
TMEM50B-204ENST00000442441 C10orf71Q711Q0 1435 aa28.17■■■□□ 2.1
TMEM50B-204ENST00000442441 TIMELESSQ9UNS1 1208 aa28.16■■■□□ 2.1
TMEM50B-204ENST00000442441 CNTNAP4Q9C0A0 1308 aa28.16■■■□□ 2.1
TMEM50B-204ENST00000442441 PLEKHO1Q53GL0 409 aaPredicted RBP28.15■■■□□ 2.1
TMEM50B-204ENST00000442441 POLR3GLQ9BT43 218 aa28.15■■■□□ 2.1
TMEM50B-204ENST00000442441 RPS6KA4O75676 772 aa28.14■■■□□ 2.1
TMEM50B-204ENST00000442441 GYS1P13807 737 aa28.14■■■□□ 2.1
TMEM50B-204ENST00000442441 RFC4P35249 363 aa28.14■■■□□ 2.1
TMEM50B-204ENST00000442441 CCDC87Q9NVE4 849 aa28.14■■■□□ 2.1
TMEM50B-204ENST00000442441 COL5A3P25940 1745 aaPredicted RBP28.14■■■□□ 2.1
TMEM50B-204ENST00000442441 C4AP0C0L4 1744 aa28.12■■■□□ 2.09
TMEM50B-204ENST00000442441 DPEP1P16444 411 aa28.12■■■□□ 2.09
TMEM50B-204ENST00000442441 ARHGAP27Q6ZUM4 889 aa28.12■■■□□ 2.09
TMEM50B-204ENST00000442441 KDM6AO15550 1401 aaPredicted RBP28.11■■■□□ 2.09
TMEM50B-204ENST00000442441 CABP4P57796 275 aa28.11■■■□□ 2.09
TMEM50B-204ENST00000442441 TRIM26Q12899 539 aaPredicted RBP28.11■■■□□ 2.09
TMEM50B-204ENST00000442441 ZNF530Q6P9A1 599 aaPredicted RBP28.11■■■□□ 2.09
TMEM50B-204ENST00000442441 PARP3Q9Y6F1 533 aa28.11■■■□□ 2.09
TMEM50B-204ENST00000442441 AMOTQ4VCS5 1084 aa28.1■■■□□ 2.09
TMEM50B-204ENST00000442441 MYH14Q7Z406 1995 aaKnown RBP28.08■■■□□ 2.09
TMEM50B-204ENST00000442441 TOMM70O94826 608 aa28.08■■■□□ 2.09
TMEM50B-204ENST00000442441 FCHSD2O94868 740 aa28.08■■■□□ 2.09
TMEM50B-204ENST00000442441 APLP1P51693 650 aa28.08■■■□□ 2.09
TMEM50B-204ENST00000442441 BRCA1P38398 1863 aaKnown RBP28.06■■■□□ 2.08
TMEM50B-204ENST00000442441 MTHFSP49914 203 aa28.06■■■□□ 2.08
TMEM50B-204ENST00000442441 PTCD1O75127 700 aaKnown RBP28.05■■■□□ 2.08
TMEM50B-204ENST00000442441 KCNA3P22001 575 aa28.05■■■□□ 2.08
TMEM50B-204ENST00000442441 C1orf141Q5JVX7 400 aa28.05■■■□□ 2.08
TMEM50B-204ENST00000442441 PANK3Q9H999 370 aa28.04■■■□□ 2.08
TMEM50B-204ENST00000442441 CRKLP46109 303 aaKnown RBP28.03■■■□□ 2.08
TMEM50B-204ENST00000442441 AEBP1Q8IUX7 1158 aa28.03■■■□□ 2.08
TMEM50B-204ENST00000442441 NFATC2IPQ8NCF5 419 aa28.03■■■□□ 2.08
TMEM50B-204ENST00000442441 NMRK2Q9NPI5 230 aa28.03■■■□□ 2.08
TMEM50B-204ENST00000442441 PIM2Q9P1W9 311 aa28.01■■■□□ 2.07
TMEM50B-204ENST00000442441 SRP68Q9UHB9 627 aaKnown RBP28.01■■■□□ 2.07
TMEM50B-204ENST00000442441 USP42Q9H9J4 1324 aaKnown RBP28■■■□□ 2.07
TMEM50B-204ENST00000442441 ARFGEF1Q9Y6D6 1849 aa28■■■□□ 2.07
TMEM50B-204ENST00000442441 C9orf131Q5VYM1 1079 aa28■■■□□ 2.07
TMEM50B-204ENST00000442441 FKBP8Q14318 412 aa27.99■■■□□ 2.07
TMEM50B-204ENST00000442441 DDR1Q08345 913 aa27.98■■■□□ 2.07
TMEM50B-204ENST00000442441 MORC1Q86VD1 984 aa27.98■■■□□ 2.07
TMEM50B-204ENST00000442441 DNAJC5GQ8N7S2 189 aa27.98■■■□□ 2.07
TMEM50B-204ENST00000442441 EIF4G2P78344 907 aaKnown RBP eCLIP27.97■■■□□ 2.07
TMEM50B-204ENST00000442441 DALRD3Q5D0E6 543 aaKnown RBP27.97■■■□□ 2.07
TMEM50B-204ENST00000442441 SULT6B1Q6IMI4 303 aa27.97■■■□□ 2.07
TMEM50B-204ENST00000442441 TJP1Q07157 1748 aa27.96■■■□□ 2.07
TMEM50B-204ENST00000442441 RBM46Q8TBY0 533 aaKnown RBP27.96■■■□□ 2.07
TMEM50B-204ENST00000442441 CLSPNQ9HAW4 1339 aa27.95■■■□□ 2.07
TMEM50B-204ENST00000442441 HSPA5P11021 654 aaKnown RBP27.94■■■□□ 2.06
TMEM50B-204ENST00000442441 INTS5Q6P9B9 1019 aaKnown RBP27.94■■■□□ 2.06
TMEM50B-204ENST00000442441 C16orf71Q8IYS4 520 aaPredicted RBP27.93■■■□□ 2.06
TMEM50B-204ENST00000442441 SCN11AQ9UI33 1791 aa27.92■■■□□ 2.06
TMEM50B-204ENST00000442441 CHRNA5P30532 468 aa27.92■■■□□ 2.06
TMEM50B-204ENST00000442441 POLRMTO00411 1230 aaKnown RBP27.91■■■□□ 2.06
TMEM50B-204ENST00000442441 TM4SF1P30408 202 aa27.91■■■□□ 2.06
TMEM50B-204ENST00000442441 IL13P35225 146 aa27.91■■■□□ 2.06
TMEM50B-204ENST00000442441 RNF181Q9P0P0 153 aa27.91■■■□□ 2.06
TMEM50B-204ENST00000442441 KDM2BQ8NHM5 1336 aa27.91■■■□□ 2.06
TMEM50B-204ENST00000442441 ADAMTS7Q9UKP4 1686 aa27.91■■■□□ 2.06
TMEM50B-204ENST00000442441 AKAP4Q5JQC9 854 aa27.9■■■□□ 2.06
TMEM50B-204ENST00000442441 KCPQ6ZWJ8 1503 aa27.89■■■□□ 2.06
TMEM50B-204ENST00000442441 ZPR1O75312 459 aa27.89■■■□□ 2.06
TMEM50B-204ENST00000442441 DNAJC10Q8IXB1 793 aa27.89■■■□□ 2.06
TMEM50B-204ENST00000442441 WDR90Q96KV7 1748 aa27.89■■■□□ 2.05
TMEM50B-204ENST00000442441 FSTL1Q12841 308 aa27.88■■■□□ 2.05
TMEM50B-204ENST00000442441 USPL1Q5W0Q7 1092 aa27.88■■■□□ 2.05
TMEM50B-204ENST00000442441 SLC52A2Q9HAB3 445 aa27.88■■■□□ 2.05
TMEM50B-204ENST00000442441 KNSTRNQ9Y448 316 aa27.87■■■□□ 2.05
TMEM50B-204ENST00000442441 SOS1Q07889 1333 aaPredicted RBP27.87■■■□□ 2.05
TMEM50B-204ENST00000442441 LGR6Q9HBX8 967 aa27.86■■■□□ 2.05
TMEM50B-204ENST00000442441 PCGF6Q9BYE7 350 aa27.85■■■□□ 2.05
TMEM50B-204ENST00000442441 SBF1O95248 1867 aa27.85■■■□□ 2.05
TMEM50B-204ENST00000442441 CYP19A1P11511 503 aaPredicted RBP27.84■■■□□ 2.05
TMEM50B-204ENST00000442441 RRAGCQ9HB90 399 aa27.84■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 133 ms