RNA–Protein interactions for RNA: ENST00000442275.1

LCP1-204, Transcript of lymphocyte cytosolic protein 1, humanhuman

TSL 3

Gene LCP1, Length 753 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCP1-204ENST00000442275 IFNL2Q8IZJ0 200 aa28.29■■■□□ 2.12
LCP1-204ENST00000442275 KIAA1551Q9HCM1 1747 aa28.29■■■□□ 2.12
LCP1-204ENST00000442275 KIF13BQ9NQT8 1826 aa28.28■■■□□ 2.12
LCP1-204ENST00000442275 A0A0G2JLW4 131 aa28.28■■■□□ 2.12
LCP1-204ENST00000442275 ATG3Q9NT62 314 aa28.28■■■□□ 2.12
LCP1-204ENST00000442275 ANKRD26Q9UPS8 1709 aa28.28■■■□□ 2.12
LCP1-204ENST00000442275 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.27■■■□□ 2.12
LCP1-204ENST00000442275 WASHC2AQ641Q2 1341 aa28.26■■■□□ 2.11
LCP1-204ENST00000442275 APLP1P51693 650 aa28.26■■■□□ 2.11
LCP1-204ENST00000442275 TRAPPC3LQ5T215 181 aa28.25■■■□□ 2.11
LCP1-204ENST00000442275 ARHGAP27Q6ZUM4 889 aa28.25■■■□□ 2.11
LCP1-204ENST00000442275 RTCBQ9Y3I0 505 aaKnown RBP28.25■■■□□ 2.11
LCP1-204ENST00000442275 TGFB2P61812 414 aa28.24■■■□□ 2.11
LCP1-204ENST00000442275 RBM42Q9BTD8 480 aaKnown RBP28.24■■■□□ 2.11
LCP1-204ENST00000442275 TOMM70O94826 608 aa28.23■■■□□ 2.11
LCP1-204ENST00000442275 NLGN1Q8N2Q7 840 aa28.23■■■□□ 2.11
LCP1-204ENST00000442275 C10orf71Q711Q0 1435 aa28.22■■■□□ 2.11
LCP1-204ENST00000442275 FCHSD2O94868 740 aa28.21■■■□□ 2.11
LCP1-204ENST00000442275 DPEP1P16444 411 aa28.21■■■□□ 2.11
LCP1-204ENST00000442275 NMRK2Q9NPI5 230 aa28.21■■■□□ 2.11
LCP1-204ENST00000442275 CCDC87Q9NVE4 849 aa28.21■■■□□ 2.11
LCP1-204ENST00000442275 KDRP35968 1356 aa28.21■■■□□ 2.11
LCP1-204ENST00000442275 ARHGEF1Q92888 912 aaKnown RBP28.2■■■□□ 2.1
LCP1-204ENST00000442275 SLC4A9Q96Q91 983 aa28.2■■■□□ 2.1
LCP1-204ENST00000442275 C4AP0C0L4 1744 aa28.19■■■□□ 2.1
LCP1-204ENST00000442275 POLKQ9UBT6 870 aa28.19■■■□□ 2.1
LCP1-204ENST00000442275 TNNT2P45379 298 aaPredicted RBP28.18■■■□□ 2.1
LCP1-204ENST00000442275 GYS1P13807 737 aa28.17■■■□□ 2.1
LCP1-204ENST00000442275 RFC4P35249 363 aa28.17■■■□□ 2.1
LCP1-204ENST00000442275 EIF4A2Q14240 407 aaKnown RBP28.17■■■□□ 2.1
LCP1-204ENST00000442275 PARP3Q9Y6F1 533 aa28.17■■■□□ 2.1
LCP1-204ENST00000442275 COL5A3P25940 1745 aaPredicted RBP28.16■■■□□ 2.1
LCP1-204ENST00000442275 DNAJC5GQ8N7S2 189 aa28.16■■■□□ 2.1
LCP1-204ENST00000442275 BRCA1P38398 1863 aaKnown RBP28.15■■■□□ 2.1
LCP1-204ENST00000442275 ADRA2BP18089 450 aa28.14■■■□□ 2.1
LCP1-204ENST00000442275 ERVV-2B6SEH9 535 aa28.13■■■□□ 2.09
LCP1-204ENST00000442275 RPS6KA4O75676 772 aa28.13■■■□□ 2.09
LCP1-204ENST00000442275 RC3H1Q5TC82 1133 aaKnown RBP28.13■■■□□ 2.09
LCP1-204ENST00000442275 C9orf131Q5VYM1 1079 aa28.13■■■□□ 2.09
LCP1-204ENST00000442275 CNTNAP4Q9C0A0 1308 aa28.13■■■□□ 2.09
LCP1-204ENST00000442275 ZNF831Q5JPB2 1677 aa28.13■■■□□ 2.09
LCP1-204ENST00000442275 C16orf71Q8IYS4 520 aaPredicted RBP28.12■■■□□ 2.09
LCP1-204ENST00000442275 POLR3GLQ9BT43 218 aa28.12■■■□□ 2.09
LCP1-204ENST00000442275 WDR90Q96KV7 1748 aa28.12■■■□□ 2.09
LCP1-204ENST00000442275 MYH14Q7Z406 1995 aaKnown RBP28.11■■■□□ 2.09
LCP1-204ENST00000442275 DCAF5Q96JK2 942 aa28.11■■■□□ 2.09
LCP1-204ENST00000442275 HTRA3P83110 453 aa28.1■■■□□ 2.09
LCP1-204ENST00000442275 ARFGEF1Q9Y6D6 1849 aa28.1■■■□□ 2.09
LCP1-204ENST00000442275 HSP90AB1P08238 724 aaKnown RBP28.09■■■□□ 2.09
LCP1-204ENST00000442275 KCNA3P22001 575 aa28.09■■■□□ 2.09
LCP1-204ENST00000442275 CABP4P57796 275 aa28.09■■■□□ 2.09
LCP1-204ENST00000442275 PTCD1O75127 700 aaKnown RBP28.08■■■□□ 2.09
LCP1-204ENST00000442275 ZNF530Q6P9A1 599 aaPredicted RBP28.08■■■□□ 2.09
LCP1-204ENST00000442275 RBM46Q8TBY0 533 aaKnown RBP28.08■■■□□ 2.09
LCP1-204ENST00000442275 PIM2Q9P1W9 311 aa28.08■■■□□ 2.09
LCP1-204ENST00000442275 SRP68Q9UHB9 627 aaKnown RBP28.08■■■□□ 2.09
LCP1-204ENST00000442275 KDM6AO15550 1401 aaPredicted RBP28.08■■■□□ 2.09
LCP1-204ENST00000442275 PLEKHO1Q53GL0 409 aaPredicted RBP28.07■■■□□ 2.08
LCP1-204ENST00000442275 PLEKHG2Q9H7P9 1386 aa28.07■■■□□ 2.08
LCP1-204ENST00000442275 KCPQ6ZWJ8 1503 aa28.06■■■□□ 2.08
LCP1-204ENST00000442275 DALRD3Q5D0E6 543 aaKnown RBP28.05■■■□□ 2.08
LCP1-204ENST00000442275 RNF181Q9P0P0 153 aa28.05■■■□□ 2.08
LCP1-204ENST00000442275 CRKLP46109 303 aaKnown RBP28.04■■■□□ 2.08
LCP1-204ENST00000442275 FKBP8Q14318 412 aa28.04■■■□□ 2.08
LCP1-204ENST00000442275 KDM2BQ8NHM5 1336 aa28.02■■■□□ 2.08
LCP1-204ENST00000442275 CHRNA5P30532 468 aa28.02■■■□□ 2.08
LCP1-204ENST00000442275 MTHFSP49914 203 aa28.02■■■□□ 2.08
LCP1-204ENST00000442275 DDR1Q08345 913 aa28.02■■■□□ 2.08
LCP1-204ENST00000442275 KLRG1Q96E93 195 aa28.01■■■□□ 2.07
LCP1-204ENST00000442275 RRAGCQ9HB90 399 aa28.01■■■□□ 2.07
LCP1-204ENST00000442275 USP42Q9H9J4 1324 aaKnown RBP28■■■□□ 2.07
LCP1-204ENST00000442275 AMOTQ4VCS5 1084 aa28■■■□□ 2.07
LCP1-204ENST00000442275 FSTL1Q12841 308 aa27.99■■■□□ 2.07
LCP1-204ENST00000442275 C1orf141Q5JVX7 400 aa27.99■■■□□ 2.07
LCP1-204ENST00000442275 NFATC2IPQ8NCF5 419 aa27.99■■■□□ 2.07
LCP1-204ENST00000442275 TJP1Q07157 1748 aa27.98■■■□□ 2.07
LCP1-204ENST00000442275 AEBP1Q8IUX7 1158 aa27.98■■■□□ 2.07
LCP1-204ENST00000442275 SBF1O95248 1867 aa27.96■■■□□ 2.07
LCP1-204ENST00000442275 COL13A1Q5TAT6 717 aaPredicted RBP27.96■■■□□ 2.07
LCP1-204ENST00000442275 TNRC6CQ9HCJ0 1690 aaKnown RBP27.95■■■□□ 2.07
LCP1-204ENST00000442275 POLRMTO00411 1230 aaKnown RBP27.94■■■□□ 2.06
LCP1-204ENST00000442275 CAPN15O75808 1086 aa27.93■■■□□ 2.06
LCP1-204ENST00000442275 JMYQ8N9B5 988 aa27.93■■■□□ 2.06
LCP1-204ENST00000442275 RASSF7Q02833 373 aa27.92■■■□□ 2.06
LCP1-204ENST00000442275 INTS5Q6P9B9 1019 aaKnown RBP27.92■■■□□ 2.06
LCP1-204ENST00000442275 PCNTO95613 3336 aa27.91■■■□□ 2.06
LCP1-204ENST00000442275 ZPR1O75312 459 aa27.91■■■□□ 2.06
LCP1-204ENST00000442275 USPL1Q5W0Q7 1092 aa27.91■■■□□ 2.06
LCP1-204ENST00000442275 TM4SF1P30408 202 aa27.9■■■□□ 2.06
LCP1-204ENST00000442275 SULT6B1Q6IMI4 303 aa27.9■■■□□ 2.06
LCP1-204ENST00000442275 ADAMTS7Q9UKP4 1686 aa27.9■■■□□ 2.06
LCP1-204ENST00000442275 DNAJC10Q8IXB1 793 aa27.89■■■□□ 2.06
LCP1-204ENST00000442275 SMC1BQ8NDV3 1235 aa27.89■■■□□ 2.06
LCP1-204ENST00000442275 SCN11AQ9UI33 1791 aa27.88■■■□□ 2.05
LCP1-204ENST00000442275 PANK3Q9H999 370 aa27.88■■■□□ 2.05
LCP1-204ENST00000442275 AFDNP55196 1824 aaKnown RBP27.87■■■□□ 2.05
LCP1-204ENST00000442275 MORC1Q86VD1 984 aa27.86■■■□□ 2.05
LCP1-204ENST00000442275 SOS1Q07889 1333 aaPredicted RBP27.85■■■□□ 2.05
LCP1-204ENST00000442275 TNS4Q8IZW8 715 aa27.84■■■□□ 2.05
LCP1-204ENST00000442275 NFIXQ14938 502 aa27.83■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms