RNA–Protein interactions for RNA: ENST00000440731.4

PGBD4P3-201, Transcript of piggyBac transposable element derived 4 pseudogene 3, humanhuman

BASIC

Gene PGBD4P3, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4P3-201ENST00000440731 TRIM50Q86XT4 487 aa7.25□□□□□ -1.25
PGBD4P3-201ENST00000440731 PLEKHM2Q8IWE5 1019 aa7.25□□□□□ -1.25
PGBD4P3-201ENST00000440731 OGFOD1Q8N543 542 aa7.25□□□□□ -1.25
PGBD4P3-201ENST00000440731 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.25□□□□□ -1.25
PGBD4P3-201ENST00000440731 DNAAF2Q9NVR5 837 aaKnown RBP7.25□□□□□ -1.25
PGBD4P3-201ENST00000440731 RBM19Q9Y4C8 960 aaKnown RBP7.25□□□□□ -1.25
PGBD4P3-201ENST00000440731 PHKA2P46019 1235 aa7.24□□□□□ -1.25
PGBD4P3-201ENST00000440731 ATP1A2P50993 1020 aa7.24□□□□□ -1.25
PGBD4P3-201ENST00000440731 SCNN1DP51172 638 aa7.24□□□□□ -1.25
PGBD4P3-201ENST00000440731 CLDN10P78369 228 aa7.24□□□□□ -1.25
PGBD4P3-201ENST00000440731 TLR1Q15399 786 aa7.24□□□□□ -1.25
PGBD4P3-201ENST00000440731 TPCN2Q8NHX9 752 aa7.24□□□□□ -1.25
PGBD4P3-201ENST00000440731 IRF7Q92985 503 aa7.24□□□□□ -1.25
PGBD4P3-201ENST00000440731 XAGE2Q96GT9 111 aa7.24□□□□□ -1.25
PGBD4P3-201ENST00000440731 ZSCAN10Q96SZ4 725 aaPredicted RBP7.24□□□□□ -1.25
PGBD4P3-201ENST00000440731 VRTNQ9H8Y1 702 aa7.24□□□□□ -1.25
PGBD4P3-201ENST00000440731 NXF1Q9UBU9 619 aaKnown RBP7.24□□□□□ -1.25
PGBD4P3-201ENST00000440731 TMEM229AB2RXF0 380 aa7.23□□□□□ -1.25
PGBD4P3-201ENST00000440731 CFAP70Q5T0N1 1121 aa7.23□□□□□ -1.25
PGBD4P3-201ENST00000440731 CCDC102BQ68D86 513 aa7.23□□□□□ -1.25
PGBD4P3-201ENST00000440731 LARP1Q6PKG0 1096 aaKnown RBP7.23□□□□□ -1.25
PGBD4P3-201ENST00000440731 ERICH6Q7L0X2 663 aa7.23□□□□□ -1.25
PGBD4P3-201ENST00000440731 KCTD17Q8N5Z5 321 aa7.23□□□□□ -1.25
PGBD4P3-201ENST00000440731 KIAA1024Q9UPX6 916 aa7.23□□□□□ -1.25
PGBD4P3-201ENST00000440731 GPC1P35052 558 aa7.22□□□□□ -1.25
PGBD4P3-201ENST00000440731 GAS2L1Q99501 681 aaPredicted RBP7.22□□□□□ -1.25
PGBD4P3-201ENST00000440731 GRIP2Q9C0E4 1043 aa7.22□□□□□ -1.25
PGBD4P3-201ENST00000440731 BACH1O14867 736 aa7.21□□□□□ -1.26
PGBD4P3-201ENST00000440731 ZBTB7BO15156 539 aaPredicted RBP7.21□□□□□ -1.26
PGBD4P3-201ENST00000440731 GNASQ5JWF2 1037 aa7.21□□□□□ -1.26
PGBD4P3-201ENST00000440731 CCDC82Q8N4S0 544 aa7.21□□□□□ -1.26
PGBD4P3-201ENST00000440731 CCDC155Q8N6L0 562 aa7.21□□□□□ -1.26
PGBD4P3-201ENST00000440731 ARID3AQ99856 593 aa7.21□□□□□ -1.26
PGBD4P3-201ENST00000440731 SERPINA10Q9UK55 444 aa7.21□□□□□ -1.26
PGBD4P3-201ENST00000440731 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.2□□□□□ -1.26
PGBD4P3-201ENST00000440731 SFI1A8K8P3 1242 aa7.2□□□□□ -1.26
PGBD4P3-201ENST00000440731 PPFIA3O75145 1194 aa7.2□□□□□ -1.26
PGBD4P3-201ENST00000440731 LGR5O75473 907 aa7.2□□□□□ -1.26
PGBD4P3-201ENST00000440731 SMTNP53814 917 aa7.2□□□□□ -1.26
PGBD4P3-201ENST00000440731 TBCELQ5QJ74 424 aa7.2□□□□□ -1.26
PGBD4P3-201ENST00000440731 KANK4Q5T7N3 995 aaPredicted RBP7.2□□□□□ -1.26
PGBD4P3-201ENST00000440731 NBPF10Q6P3W6 841 aaKnown RBP7.2□□□□□ -1.26
PGBD4P3-201ENST00000440731 RIPOR1Q6ZS17 1223 aa7.2□□□□□ -1.26
PGBD4P3-201ENST00000440731 TAS1R3Q7RTX0 852 aa7.2□□□□□ -1.26
PGBD4P3-201ENST00000440731 TNS4Q8IZW8 715 aa7.2□□□□□ -1.26
PGBD4P3-201ENST00000440731 LARGE2Q8N3Y3 721 aa7.2□□□□□ -1.26
PGBD4P3-201ENST00000440731 NBPF15Q8N660 670 aa7.2□□□□□ -1.26
PGBD4P3-201ENST00000440731 AIDAQ96BJ3 306 aa7.2□□□□□ -1.26
PGBD4P3-201ENST00000440731 C1orf115Q9H7X2 142 aa7.2□□□□□ -1.26
PGBD4P3-201ENST00000440731 ZNF358Q9NW07 568 aa7.2□□□□□ -1.26
PGBD4P3-201ENST00000440731 WASLO00401 505 aaPredicted RBP7.19□□□□□ -1.26
PGBD4P3-201ENST00000440731 CRTC2Q53ET0 693 aaPredicted RBP7.19□□□□□ -1.26
PGBD4P3-201ENST00000440731 HINFPQ9BQA5 517 aa7.19□□□□□ -1.26
PGBD4P3-201ENST00000440731 FHDC1Q9C0D6 1143 aaPredicted RBP7.19□□□□□ -1.26
PGBD4P3-201ENST00000440731 TIMMDC1Q9NPL8 285 aa7.19□□□□□ -1.26
PGBD4P3-201ENST00000440731 HRH3Q9Y5N1 445 aa7.19□□□□□ -1.26
PGBD4P3-201ENST00000440731 CDC14CA4D256 554 aa7.18□□□□□ -1.26
PGBD4P3-201ENST00000440731 SLC35F4A4IF30 521 aa7.18□□□□□ -1.26
PGBD4P3-201ENST00000440731 A6NJY4 79 aa7.18□□□□□ -1.26
PGBD4P3-201ENST00000440731 DPYDQ12882 1025 aa7.18□□□□□ -1.26
PGBD4P3-201ENST00000440731 CABP1Q9NZU7 370 aa7.18□□□□□ -1.26
PGBD4P3-201ENST00000440731 PARP3Q9Y6F1 533 aa7.18□□□□□ -1.26
PGBD4P3-201ENST00000440731 SENP3-EIF4A1A0A087X0R7 540 aa7.17□□□□□ -1.26
PGBD4P3-201ENST00000440731 USP17L15C9J2P7 530 aa7.17□□□□□ -1.26
PGBD4P3-201ENST00000440731 USP17L10C9JJH3 530 aa7.17□□□□□ -1.26
PGBD4P3-201ENST00000440731 USP17L13C9JLJ4 530 aa7.17□□□□□ -1.26
PGBD4P3-201ENST00000440731 USP17L12C9JPN9 530 aa7.17□□□□□ -1.26
PGBD4P3-201ENST00000440731 USP17L11C9JVI0 530 aa7.17□□□□□ -1.26
PGBD4P3-201ENST00000440731 USP17L21D6R901 530 aa7.17□□□□□ -1.26
PGBD4P3-201ENST00000440731 USP17L18D6R9N7 530 aa7.17□□□□□ -1.26
PGBD4P3-201ENST00000440731 USP17L22D6RA61 530 aa7.17□□□□□ -1.26
PGBD4P3-201ENST00000440731 USP17L17D6RBQ6 530 aa7.17□□□□□ -1.26
PGBD4P3-201ENST00000440731 USP17L19D6RCP7 530 aa7.17□□□□□ -1.26
PGBD4P3-201ENST00000440731 USP17L20D6RJB6 530 aa7.17□□□□□ -1.26
PGBD4P3-201ENST00000440731 PLA2G4AP47712 749 aa7.17□□□□□ -1.26
PGBD4P3-201ENST00000440731 USP17L24Q0WX57 530 aa7.17□□□□□ -1.26
PGBD4P3-201ENST00000440731 C4orf17Q53FE4 359 aa7.17□□□□□ -1.26
PGBD4P3-201ENST00000440731 PPARGC1BQ86YN6 1023 aaKnown RBP7.17□□□□□ -1.26
PGBD4P3-201ENST00000440731 NPAS3Q8IXF0 933 aa7.17□□□□□ -1.26
PGBD4P3-201ENST00000440731 TSEN2Q8NCE0 465 aaKnown RBP7.17□□□□□ -1.26
PGBD4P3-201ENST00000440731 RHBDD1Q8TEB9 315 aa7.17□□□□□ -1.26
PGBD4P3-201ENST00000440731 GPAMQ9HCL2 828 aa7.17□□□□□ -1.26
PGBD4P3-201ENST00000440731 ERBB4Q15303 1308 aa7.17□□□□□ -1.26
PGBD4P3-201ENST00000440731 SPATA31C2B4DYI2 1134 aa7.16□□□□□ -1.26
PGBD4P3-201ENST00000440731 SEC13P55735 322 aa7.16□□□□□ -1.26
PGBD4P3-201ENST00000440731 PTK7Q13308 1070 aa7.16□□□□□ -1.26
PGBD4P3-201ENST00000440731 SIX5Q8N196 739 aa7.16□□□□□ -1.26
PGBD4P3-201ENST00000440731 VWA5B2Q8N398 1253 aa7.16□□□□□ -1.26
PGBD4P3-201ENST00000440731 SLC4A9Q96Q91 983 aa7.16□□□□□ -1.26
PGBD4P3-201ENST00000440731 USP3Q9Y6I4 520 aa7.16□□□□□ -1.26
PGBD4P3-201ENST00000440731 H3BM21 787 aa7.15□□□□□ -1.26
PGBD4P3-201ENST00000440731 CDK2AP1O14519 115 aa7.15□□□□□ -1.26
PGBD4P3-201ENST00000440731 ITGA6P23229 1130 aa7.15□□□□□ -1.26
PGBD4P3-201ENST00000440731 KCNMA1Q12791 1236 aa7.15□□□□□ -1.26
PGBD4P3-201ENST00000440731 ANKMY2Q8IV38 441 aa7.15□□□□□ -1.26
PGBD4P3-201ENST00000440731 NIFKQ9BYG3 293 aaKnown RBP7.15□□□□□ -1.26
PGBD4P3-201ENST00000440731 ZNF232Q9UNY5 417 aa7.15□□□□□ -1.26
PGBD4P3-201ENST00000440731 FAM196BA6NMK8 535 aa7.14□□□□□ -1.27
PGBD4P3-201ENST00000440731 SLC9A9Q8IVB4 645 aa7.14□□□□□ -1.27
PGBD4P3-201ENST00000440731 GAS2L2Q8NHY3 880 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms