RNA–Protein interactions for RNA: ENST00000440702.5

FAM20B-202, Transcript of FAM20B, glycosaminoglycan xylosylkinase, humanhuman

TSL 3

Gene FAM20B, Length 603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM20B-202ENST00000440702 SSFA2P28290 1259 aa23.52■■□□□ 1.36
FAM20B-202ENST00000440702 ATG3Q9NT62 314 aa23.52■■□□□ 1.36
FAM20B-202ENST00000440702 IGSF1Q8N6C5 1336 aa23.52■■□□□ 1.36
FAM20B-202ENST00000440702 RBM42Q9BTD8 480 aaKnown RBP23.49■■□□□ 1.35
FAM20B-202ENST00000440702 ZNF530Q6P9A1 599 aaPredicted RBP23.48■■□□□ 1.35
FAM20B-202ENST00000440702 MORC1Q86VD1 984 aa23.47■■□□□ 1.35
FAM20B-202ENST00000440702 KDRP35968 1356 aa23.47■■□□□ 1.35
FAM20B-202ENST00000440702 ATP10DQ9P241 1426 aa23.47■■□□□ 1.35
FAM20B-202ENST00000440702 PLEKHO1Q53GL0 409 aaPredicted RBP23.46■■□□□ 1.35
FAM20B-202ENST00000440702 KDM6AO15550 1401 aaPredicted RBP23.45■■□□□ 1.34
FAM20B-202ENST00000440702 AEBP1Q8IUX7 1158 aa23.45■■□□□ 1.34
FAM20B-202ENST00000440702 CCER1Q8TC90 406 aaPredicted RBP23.45■■□□□ 1.34
FAM20B-202ENST00000440702 COL5A3P25940 1745 aaPredicted RBP23.45■■□□□ 1.34
FAM20B-202ENST00000440702 ERVV-2B6SEH9 535 aa23.44■■□□□ 1.34
FAM20B-202ENST00000440702 DCAF5Q96JK2 942 aa23.44■■□□□ 1.34
FAM20B-202ENST00000440702 SLC4A9Q96Q91 983 aa23.44■■□□□ 1.34
FAM20B-202ENST00000440702 PLEKHG2Q9H7P9 1386 aa23.43■■□□□ 1.34
FAM20B-202ENST00000440702 HSP90AB1P08238 724 aaKnown RBP23.43■■□□□ 1.34
FAM20B-202ENST00000440702 MMP10P09238 476 aa23.43■■□□□ 1.34
FAM20B-202ENST00000440702 CABP4P57796 275 aa23.42■■□□□ 1.34
FAM20B-202ENST00000440702 ZNF526Q8TF50 670 aaPredicted RBP23.42■■□□□ 1.34
FAM20B-202ENST00000440702 RTCBQ9Y3I0 505 aaKnown RBP23.42■■□□□ 1.34
FAM20B-202ENST00000440702 ZNF831Q5JPB2 1677 aa23.41■■□□□ 1.34
FAM20B-202ENST00000440702 CICQ96RK0 1608 aaPredicted RBP23.41■■□□□ 1.34
FAM20B-202ENST00000440702 N4BP2Q86UW6 1770 aaPredicted RBP23.41■■□□□ 1.34
FAM20B-202ENST00000440702 MYH14Q7Z406 1995 aaKnown RBP23.4■■□□□ 1.34
FAM20B-202ENST00000440702 AMOTQ4VCS5 1084 aa23.4■■□□□ 1.34
FAM20B-202ENST00000440702 C1orf141Q5JVX7 400 aa23.4■■□□□ 1.34
FAM20B-202ENST00000440702 TRAPPC3LQ5T215 181 aa23.4■■□□□ 1.34
FAM20B-202ENST00000440702 SULT6B1Q6IMI4 303 aa23.39■■□□□ 1.33
FAM20B-202ENST00000440702 KNSTRNQ9Y448 316 aa23.39■■□□□ 1.33
FAM20B-202ENST00000440702 C4AP0C0L4 1744 aa23.39■■□□□ 1.33
FAM20B-202ENST00000440702 KIF13BQ9NQT8 1826 aa23.38■■□□□ 1.33
FAM20B-202ENST00000440702 MTHFSP49914 203 aa23.38■■□□□ 1.33
FAM20B-202ENST00000440702 ADCY9O60503 1353 aa23.38■■□□□ 1.33
FAM20B-202ENST00000440702 KIAA1551Q9HCM1 1747 aa23.37■■□□□ 1.33
FAM20B-202ENST00000440702 PTCD1O75127 700 aaKnown RBP23.37■■□□□ 1.33
FAM20B-202ENST00000440702 ARHGEF1Q92888 912 aaKnown RBP23.37■■□□□ 1.33
FAM20B-202ENST00000440702 GPBP1L1Q9HC44 474 aaPredicted RBP23.37■■□□□ 1.33
FAM20B-202ENST00000440702 PXDNLA1KZ92 1463 aa23.36■■□□□ 1.33
FAM20B-202ENST00000440702 CNTNAP4Q9C0A0 1308 aa23.36■■□□□ 1.33
FAM20B-202ENST00000440702 SCN11AQ9UI33 1791 aa23.35■■□□□ 1.33
FAM20B-202ENST00000440702 RC3H1Q5TC82 1133 aaKnown RBP23.35■■□□□ 1.33
FAM20B-202ENST00000440702 TJP1Q07157 1748 aa23.34■■□□□ 1.33
FAM20B-202ENST00000440702 RFC4P35249 363 aa23.34■■□□□ 1.33
FAM20B-202ENST00000440702 NFATC2IPQ8NCF5 419 aa23.34■■□□□ 1.33
FAM20B-202ENST00000440702 RPS6KA4O75676 772 aa23.33■■□□□ 1.33
FAM20B-202ENST00000440702 GYS1P13807 737 aa23.33■■□□□ 1.33
FAM20B-202ENST00000440702 ADRA2BP18089 450 aa23.33■■□□□ 1.33
FAM20B-202ENST00000440702 IL13P35225 146 aa23.33■■□□□ 1.33
FAM20B-202ENST00000440702 NLGN1Q8N2Q7 840 aa23.33■■□□□ 1.33
FAM20B-202ENST00000440702 VIRMAQ69YN4 1812 aaKnown RBP23.33■■□□□ 1.32
FAM20B-202ENST00000440702 C10orf71Q711Q0 1435 aa23.33■■□□□ 1.32
FAM20B-202ENST00000440702 A0A0G2JLW4 131 aa23.32■■□□□ 1.32
FAM20B-202ENST00000440702 CRKLP46109 303 aaKnown RBP23.31■■□□□ 1.32
FAM20B-202ENST00000440702 BCS1LQ9Y276 419 aa23.31■■□□□ 1.32
FAM20B-202ENST00000440702 AMER1Q5JTC6 1135 aaPredicted RBP23.3■■□□□ 1.32
FAM20B-202ENST00000440702 CCDC87Q9NVE4 849 aa23.3■■□□□ 1.32
FAM20B-202ENST00000440702 SRP68Q9UHB9 627 aaKnown RBP23.3■■□□□ 1.32
FAM20B-202ENST00000440702 PARP3Q9Y6F1 533 aa23.3■■□□□ 1.32
FAM20B-202ENST00000440702 KIF7Q2M1P5 1343 aa23.3■■□□□ 1.32
FAM20B-202ENST00000440702 CEP350Q5VT06 3117 aa23.29■■□□□ 1.32
FAM20B-202ENST00000440702 HMOX1P09601 288 aa23.28■■□□□ 1.32
FAM20B-202ENST00000440702 DPEP1P16444 411 aa23.28■■□□□ 1.32
FAM20B-202ENST00000440702 TGFB2P61812 414 aa23.27■■□□□ 1.32
FAM20B-202ENST00000440702 BRCA1P38398 1863 aaKnown RBP23.27■■□□□ 1.32
FAM20B-202ENST00000440702 AKAP4Q5JQC9 854 aa23.26■■□□□ 1.31
FAM20B-202ENST00000440702 CNGB1Q14028 1251 aaPredicted RBP23.25■■□□□ 1.31
FAM20B-202ENST00000440702 LGR6Q9HBX8 967 aa23.25■■□□□ 1.31
FAM20B-202ENST00000440702 FCHSD2O94868 740 aa23.24■■□□□ 1.31
FAM20B-202ENST00000440702 FKBP8Q14318 412 aa23.24■■□□□ 1.31
FAM20B-202ENST00000440702 CC2D1BQ5T0F9 858 aaKnown RBP23.24■■□□□ 1.31
FAM20B-202ENST00000440702 ARHGAP27Q6ZUM4 889 aa23.24■■□□□ 1.31
FAM20B-202ENST00000440702 USP42Q9H9J4 1324 aaKnown RBP23.24■■□□□ 1.31
FAM20B-202ENST00000440702 SLC39A6Q13433 755 aa23.23■■□□□ 1.31
FAM20B-202ENST00000440702 DNAJC10Q8IXB1 793 aa23.23■■□□□ 1.31
FAM20B-202ENST00000440702 SLC52A2Q9HAB3 445 aa23.23■■□□□ 1.31
FAM20B-202ENST00000440702 RNMTO43148 476 aaKnown RBP23.22■■□□□ 1.31
FAM20B-202ENST00000440702 DDR1Q08345 913 aa23.22■■□□□ 1.31
FAM20B-202ENST00000440702 INTS5Q6P9B9 1019 aaKnown RBP23.22■■□□□ 1.31
FAM20B-202ENST00000440702 MRC1P22897 1456 aa23.22■■□□□ 1.31
FAM20B-202ENST00000440702 ADAMTS7Q9UKP4 1686 aa23.22■■□□□ 1.31
FAM20B-202ENST00000440702 ARFGEF1Q9Y6D6 1849 aa23.21■■□□□ 1.31
FAM20B-202ENST00000440702 KIF3CO14782 793 aa23.19■■□□□ 1.3
FAM20B-202ENST00000440702 KCPQ6ZWJ8 1503 aa23.18■■□□□ 1.3
FAM20B-202ENST00000440702 DIAPH1O60610 1272 aaKnown RBP23.18■■□□□ 1.3
FAM20B-202ENST00000440702 HSPA6P17066 643 aa23.18■■□□□ 1.3
FAM20B-202ENST00000440702 MTHFSDQ2M296 383 aaKnown RBP23.18■■□□□ 1.3
FAM20B-202ENST00000440702 ZPR1O75312 459 aa23.17■■□□□ 1.3
FAM20B-202ENST00000440702 KCNA3P22001 575 aa23.17■■□□□ 1.3
FAM20B-202ENST00000440702 USPL1Q5W0Q7 1092 aa23.17■■□□□ 1.3
FAM20B-202ENST00000440702 SOS1Q07889 1333 aaPredicted RBP23.16■■□□□ 1.3
FAM20B-202ENST00000440702 CHRNA5P30532 468 aa23.16■■□□□ 1.3
FAM20B-202ENST00000440702 PIM2Q9P1W9 311 aa23.16■■□□□ 1.3
FAM20B-202ENST00000440702 AFDNP55196 1824 aaKnown RBP23.15■■□□□ 1.3
FAM20B-202ENST00000440702 POLRMTO00411 1230 aaKnown RBP23.15■■□□□ 1.3
FAM20B-202ENST00000440702 PER1O15534 1290 aaPredicted RBP23.15■■□□□ 1.3
FAM20B-202ENST00000440702 CYP19A1P11511 503 aaPredicted RBP23.15■■□□□ 1.3
FAM20B-202ENST00000440702 COL15A1P39059 1388 aa23.14■■□□□ 1.3
FAM20B-202ENST00000440702 ZBTB1Q9Y2K1 713 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms