RNA–Protein interactions for RNA: ENST00000439775.1

SNRPD3-204, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 3

Gene SNRPD3, Length 640 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-204ENST00000439775 LINC00116Q8NCU8 138 aa22.1■■□□□ 1.13
SNRPD3-204ENST00000439775 C1orf141Q5JVX7 400 aa22.09■■□□□ 1.13
SNRPD3-204ENST00000439775 CC2D1BQ5T0F9 858 aaKnown RBP22.09■■□□□ 1.13
SNRPD3-204ENST00000439775 SSFA2P28290 1259 aa22.08■■□□□ 1.13
SNRPD3-204ENST00000439775 ATP6V1AP38606 617 aa22.07■■□□□ 1.12
SNRPD3-204ENST00000439775 ITPK1Q13572 414 aa22.07■■□□□ 1.12
SNRPD3-204ENST00000439775 AMIGO3Q86WK7 504 aa22.07■■□□□ 1.12
SNRPD3-204ENST00000439775 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.06■■□□□ 1.12
SNRPD3-204ENST00000439775 MSL1Q68DK7 614 aa22.06■■□□□ 1.12
SNRPD3-204ENST00000439775 CABP4P57796 275 aa22.05■■□□□ 1.12
SNRPD3-204ENST00000439775 KLHL34Q8N239 644 aa22.05■■□□□ 1.12
SNRPD3-204ENST00000439775 COL3A1P02461 1466 aaPredicted RBP22.04■■□□□ 1.12
SNRPD3-204ENST00000439775 PHF14O94880 888 aa22.04■■□□□ 1.12
SNRPD3-204ENST00000439775 GNPATO15228 680 aa22.03■■□□□ 1.12
SNRPD3-204ENST00000439775 DIAPH1O60610 1272 aaKnown RBP22.03■■□□□ 1.12
SNRPD3-204ENST00000439775 AKAP4Q5JQC9 854 aa22.02■■□□□ 1.12
SNRPD3-204ENST00000439775 NLGN2Q8NFZ4 835 aa22.02■■□□□ 1.12
SNRPD3-204ENST00000439775 SLC4A9Q96Q91 983 aa22.02■■□□□ 1.12
SNRPD3-204ENST00000439775 GOLGB1Q14789 3259 aaKnown RBP22.02■■□□□ 1.12
SNRPD3-204ENST00000439775 COL5A3P25940 1745 aaPredicted RBP22.01■■□□□ 1.11
SNRPD3-204ENST00000439775 SCN11AQ9UI33 1791 aa22.01■■□□□ 1.11
SNRPD3-204ENST00000439775 MRC1P22897 1456 aa22.01■■□□□ 1.11
SNRPD3-204ENST00000439775 CICQ96RK0 1608 aaPredicted RBP22■■□□□ 1.11
SNRPD3-204ENST00000439775 HMOX1P09601 288 aa22■■□□□ 1.11
SNRPD3-204ENST00000439775 RBM42Q9BTD8 480 aaKnown RBP22■■□□□ 1.11
SNRPD3-204ENST00000439775 CNTNAP4Q9C0A0 1308 aa22■■□□□ 1.11
SNRPD3-204ENST00000439775 GPR162Q16538 588 aa21.99■■□□□ 1.11
SNRPD3-204ENST00000439775 SMIM5Q71RC9 77 aa21.99■■□□□ 1.11
SNRPD3-204ENST00000439775 NFATC2IPQ8NCF5 419 aa21.99■■□□□ 1.11
SNRPD3-204ENST00000439775 CD2APQ9Y5K6 639 aa21.99■■□□□ 1.11
SNRPD3-204ENST00000439775 RC3H1Q5TC82 1133 aaKnown RBP21.98■■□□□ 1.11
SNRPD3-204ENST00000439775 ADAMTS7Q9UKP4 1686 aa21.98■■□□□ 1.11
SNRPD3-204ENST00000439775 RTCBQ9Y3I0 505 aaKnown RBP21.97■■□□□ 1.11
SNRPD3-204ENST00000439775 ADRA2BP18089 450 aa21.96■■□□□ 1.11
SNRPD3-204ENST00000439775 SLC52A2Q9HAB3 445 aa21.95■■□□□ 1.1
SNRPD3-204ENST00000439775 CHD4Q14839 1912 aa21.95■■□□□ 1.1
SNRPD3-204ENST00000439775 PTCD1O75127 700 aaKnown RBP21.94■■□□□ 1.1
SNRPD3-204ENST00000439775 MTHFSDQ2M296 383 aaKnown RBP21.94■■□□□ 1.1
SNRPD3-204ENST00000439775 TJP1Q07157 1748 aa21.94■■□□□ 1.1
SNRPD3-204ENST00000439775 RNMTO43148 476 aaKnown RBP21.93■■□□□ 1.1
SNRPD3-204ENST00000439775 CNGB1Q14028 1251 aaPredicted RBP21.93■■□□□ 1.1
SNRPD3-204ENST00000439775 TRAPPC3LQ5T215 181 aa21.93■■□□□ 1.1
SNRPD3-204ENST00000439775 RPS6KA4O75676 772 aa21.92■■□□□ 1.1
SNRPD3-204ENST00000439775 PELP1Q8IZL8 1130 aaKnown RBP21.92■■□□□ 1.1
SNRPD3-204ENST00000439775 LGR6Q9HBX8 967 aa21.92■■□□□ 1.1
SNRPD3-204ENST00000439775 U2SURPO15042 1029 aaKnown RBP21.91■■□□□ 1.1
SNRPD3-204ENST00000439775 C4AP0C0L4 1744 aa21.9■■□□□ 1.1
SNRPD3-204ENST00000439775 GRIN3BO60391 1043 aa21.9■■□□□ 1.1
SNRPD3-204ENST00000439775 YBX3P16989 372 aaKnown RBP eCLIP21.9■■□□□ 1.16e-7■■□□□ 13.6
SNRPD3-204ENST00000439775 CRKLP46109 303 aaKnown RBP21.9■■□□□ 1.1
SNRPD3-204ENST00000439775 ZNF784Q8NCA9 323 aaPredicted RBP21.9■■□□□ 1.1
SNRPD3-204ENST00000439775 ARHGEF1Q92888 912 aaKnown RBP21.9■■□□□ 1.1
SNRPD3-204ENST00000439775 CFAP53Q96M91 514 aa21.9■■□□□ 1.1
SNRPD3-204ENST00000439775 MYH14Q7Z406 1995 aaKnown RBP21.89■■□□□ 1.09
SNRPD3-204ENST00000439775 NLGN1Q8N2Q7 840 aa21.89■■□□□ 1.09
SNRPD3-204ENST00000439775 KCPQ6ZWJ8 1503 aa21.89■■□□□ 1.09
SNRPD3-204ENST00000439775 VIRMAQ69YN4 1812 aaKnown RBP21.89■■□□□ 1.09
SNRPD3-204ENST00000439775 MMP10P09238 476 aa21.88■■□□□ 1.09
SNRPD3-204ENST00000439775 GAS2L2Q8NHY3 880 aa21.88■■□□□ 1.09
SNRPD3-204ENST00000439775 RFC4P35249 363 aa21.87■■□□□ 1.09
SNRPD3-204ENST00000439775 GYS1P13807 737 aa21.86■■□□□ 1.09
SNRPD3-204ENST00000439775 UBR2Q8IWV8 1755 aa21.85■■□□□ 1.09
SNRPD3-204ENST00000439775 PPP2R1AP30153 589 aa21.85■■□□□ 1.09
SNRPD3-204ENST00000439775 KIF13BQ9NQT8 1826 aa21.85■■□□□ 1.09
SNRPD3-204ENST00000439775 C10orf71Q711Q0 1435 aa21.84■■□□□ 1.09
SNRPD3-204ENST00000439775 GNAT3A8MTJ3 354 aa21.84■■□□□ 1.09
SNRPD3-204ENST00000439775 SLC39A6Q13433 755 aa21.84■■□□□ 1.09
SNRPD3-204ENST00000439775 INTS5Q6P9B9 1019 aaKnown RBP21.84■■□□□ 1.09
SNRPD3-204ENST00000439775 VSIG10Q8N0Z9 540 aa21.84■■□□□ 1.09
SNRPD3-204ENST00000439775 DNAJC10Q8IXB1 793 aa21.83■■□□□ 1.09
SNRPD3-204ENST00000439775 RSPH6AQ9H0K4 717 aa21.83■■□□□ 1.09
SNRPD3-204ENST00000439775 CCDC87Q9NVE4 849 aa21.83■■□□□ 1.09
SNRPD3-204ENST00000439775 NUDCQ9Y266 331 aa21.83■■□□□ 1.09
SNRPD3-204ENST00000439775 USP42Q9H9J4 1324 aaKnown RBP21.82■■□□□ 1.08
SNRPD3-204ENST00000439775 CYP19A1P11511 503 aaPredicted RBP21.81■■□□□ 1.08
SNRPD3-204ENST00000439775 PRKAR2BP31323 418 aa21.81■■□□□ 1.08
SNRPD3-204ENST00000439775 CEMIPQ8WUJ3 1361 aa21.81■■□□□ 1.08
SNRPD3-204ENST00000439775 PXDNLA1KZ92 1463 aa21.81■■□□□ 1.08
SNRPD3-204ENST00000439775 SOS1Q07889 1333 aaPredicted RBP21.8■■□□□ 1.08
SNRPD3-204ENST00000439775 SIPA1L3O60292 1781 aaPredicted RBP21.8■■□□□ 1.08
SNRPD3-204ENST00000439775 TEFQ10587 303 aa21.8■■□□□ 1.08
SNRPD3-204ENST00000439775 IL17REQ8NFR9 667 aa21.8■■□□□ 1.08
SNRPD3-204ENST00000439775 KIAA1551Q9HCM1 1747 aa21.8■■□□□ 1.08
SNRPD3-204ENST00000439775 TTC5Q8N0Z6 440 aa21.79■■□□□ 1.08
SNRPD3-204ENST00000439775 PHACTR3Q96KR7 559 aa21.79■■□□□ 1.08
SNRPD3-204ENST00000439775 PARP3Q9Y6F1 533 aa21.79■■□□□ 1.08
SNRPD3-204ENST00000439775 TGFB2P61812 414 aa21.78■■□□□ 1.08
SNRPD3-204ENST00000439775 SRP68Q9UHB9 627 aaKnown RBP21.78■■□□□ 1.08
SNRPD3-204ENST00000439775 FCHSD2O94868 740 aa21.77■■□□□ 1.08
SNRPD3-204ENST00000439775 U2AF1L5P0DN76 240 aaPredicted RBP21.77■■□□□ 1.08
SNRPD3-204ENST00000439775 U2AF1Q01081 240 aaKnown RBP eCLIP21.77■■□□□ 1.08
SNRPD3-204ENST00000439775 COL15A1P39059 1388 aa21.76■■□□□ 1.07
SNRPD3-204ENST00000439775 FKBP8Q14318 412 aa21.76■■□□□ 1.07
SNRPD3-204ENST00000439775 ZNF790Q6PG37 636 aa21.76■■□□□ 1.07
SNRPD3-204ENST00000439775 ZBTB1Q9Y2K1 713 aa21.76■■□□□ 1.07
SNRPD3-204ENST00000439775 HEG1Q9ULI3 1381 aa21.74■■□□□ 1.07
SNRPD3-204ENST00000439775 ZPR1O75312 459 aa21.74■■□□□ 1.07
SNRPD3-204ENST00000439775 ZNF496Q96IT1 587 aaPredicted RBP21.74■■□□□ 1.07
SNRPD3-204ENST00000439775 STARD3NLO95772 234 aa21.73■■□□□ 1.07
SNRPD3-204ENST00000439775 DDR1Q08345 913 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms