RNA–Protein interactions for RNA: ENST00000436324.5

HMGN1-207, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-207ENST00000436324 NFATC2IPQ8NCF5 419 aa24.62■■□□□ 1.53
HMGN1-207ENST00000436324 ARXQ96QS3 562 aa24.62■■□□□ 1.53
HMGN1-207ENST00000436324 C5P01031 1676 aa24.62■■□□□ 1.53
HMGN1-207ENST00000436324 TUBGCP6Q96RT7 1819 aa24.61■■□□□ 1.53
HMGN1-207ENST00000436324 FHDC1Q9C0D6 1143 aaPredicted RBP24.6■■□□□ 1.53
HMGN1-207ENST00000436324 LGR6Q9HBX8 967 aa24.6■■□□□ 1.53
HMGN1-207ENST00000436324 PHF14O94880 888 aa24.59■■□□□ 1.53
HMGN1-207ENST00000436324 POLD1P28340 1107 aa24.59■■□□□ 1.53
HMGN1-207ENST00000436324 MSL1Q68DK7 614 aa24.59■■□□□ 1.53
HMGN1-207ENST00000436324 QSER1Q2KHR3 1735 aa24.58■■□□□ 1.53
HMGN1-207ENST00000436324 AMIGO3Q86WK7 504 aa24.58■■□□□ 1.53
HMGN1-207ENST00000436324 RNMTO43148 476 aaKnown RBP24.57■■□□□ 1.52
HMGN1-207ENST00000436324 PTCD1O75127 700 aaKnown RBP24.57■■□□□ 1.52
HMGN1-207ENST00000436324 KLHL34Q8N239 644 aa24.57■■□□□ 1.52
HMGN1-207ENST00000436324 FLAD1Q8NFF5 587 aa24.57■■□□□ 1.52
HMGN1-207ENST00000436324 SLC4A9Q96Q91 983 aa24.57■■□□□ 1.52
HMGN1-207ENST00000436324 C4BP0C0L5 1744 aa24.57■■□□□ 1.52
HMGN1-207ENST00000436324 TAF1LQ8IZX4 1826 aa24.56■■□□□ 1.52
HMGN1-207ENST00000436324 SYT17Q9BSW7 474 aa24.56■■□□□ 1.52
HMGN1-207ENST00000436324 NUDCQ9Y266 331 aa24.56■■□□□ 1.52
HMGN1-207ENST00000436324 GNPATO15228 680 aa24.55■■□□□ 1.52
HMGN1-207ENST00000436324 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.54■■□□□ 1.52
HMGN1-207ENST00000436324 SLC52A2Q9HAB3 445 aa24.54■■□□□ 1.52
HMGN1-207ENST00000436324 DCAF8L1A6NGE4 600 aa24.53■■□□□ 1.52
HMGN1-207ENST00000436324 U2AF1L5P0DN76 240 aaPredicted RBP24.53■■□□□ 1.52
HMGN1-207ENST00000436324 U2AF1Q01081 240 aaKnown RBP eCLIP24.53■■□□□ 1.524e-7■■■■■ 29.1
HMGN1-207ENST00000436324 DDX10Q13206 875 aaKnown RBP24.53■■□□□ 1.52
HMGN1-207ENST00000436324 PRKAR2BP31323 418 aa24.52■■□□□ 1.52
HMGN1-207ENST00000436324 RSPH6AQ9H0K4 717 aa24.51■■□□□ 1.51
HMGN1-207ENST00000436324 SSFA2P28290 1259 aa24.5■■□□□ 1.51
HMGN1-207ENST00000436324 SLC39A6Q13433 755 aa24.5■■□□□ 1.51
HMGN1-207ENST00000436324 GAS2L2Q8NHY3 880 aa24.5■■□□□ 1.51
HMGN1-207ENST00000436324 PHACTR3Q96KR7 559 aa24.5■■□□□ 1.51
HMGN1-207ENST00000436324 SCN11AQ9UI33 1791 aa24.49■■□□□ 1.51
HMGN1-207ENST00000436324 MAP3K5Q99683 1374 aa24.47■■□□□ 1.51
HMGN1-207ENST00000436324 GNAT3A8MTJ3 354 aa24.47■■□□□ 1.51
HMGN1-207ENST00000436324 RTCBQ9Y3I0 505 aaKnown RBP24.47■■□□□ 1.51
HMGN1-207ENST00000436324 IL17REQ8NFR9 667 aa24.46■■□□□ 1.51
HMGN1-207ENST00000436324 UBR3Q6ZT12 1888 aa24.45■■□□□ 1.51
HMGN1-207ENST00000436324 TRAPPC3LQ5T215 181 aa24.45■■□□□ 1.5
HMGN1-207ENST00000436324 RC3H1Q5TC82 1133 aaKnown RBP24.45■■□□□ 1.5
HMGN1-207ENST00000436324 CNTNAP4Q9C0A0 1308 aa24.44■■□□□ 1.5
HMGN1-207ENST00000436324 FCHSD2O94868 740 aa24.43■■□□□ 1.5
HMGN1-207ENST00000436324 CRKLP46109 303 aaKnown RBP24.43■■□□□ 1.5
HMGN1-207ENST00000436324 TEFQ10587 303 aa24.43■■□□□ 1.5
HMGN1-207ENST00000436324 DNAJC10Q8IXB1 793 aa24.43■■□□□ 1.5
HMGN1-207ENST00000436324 COL24A1Q17RW2 1714 aa24.43■■□□□ 1.5
HMGN1-207ENST00000436324 MRC1P22897 1456 aa24.43■■□□□ 1.5
HMGN1-207ENST00000436324 RPS6KA4O75676 772 aa24.42■■□□□ 1.5
HMGN1-207ENST00000436324 NLGN2Q8NFZ4 835 aa24.42■■□□□ 1.5
HMGN1-207ENST00000436324 ARHGEF1Q92888 912 aaKnown RBP24.41■■□□□ 1.5
HMGN1-207ENST00000436324 ZNF831Q5JPB2 1677 aa24.4■■□□□ 1.5
HMGN1-207ENST00000436324 RALBP1Q15311 655 aa24.39■■□□□ 1.49
HMGN1-207ENST00000436324 PELP1Q8IZL8 1130 aaKnown RBP24.39■■□□□ 1.49
HMGN1-207ENST00000436324 TTC5Q8N0Z6 440 aa24.39■■□□□ 1.49
HMGN1-207ENST00000436324 ADAMTS7Q9UKP4 1686 aa24.38■■□□□ 1.49
HMGN1-207ENST00000436324 RFC4P35249 363 aa24.38■■□□□ 1.49
HMGN1-207ENST00000436324 COL5A3P25940 1745 aaPredicted RBP24.38■■□□□ 1.49
HMGN1-207ENST00000436324 ADRA2BP18089 450 aa24.37■■□□□ 1.49
HMGN1-207ENST00000436324 GPR162Q16538 588 aa24.37■■□□□ 1.49
HMGN1-207ENST00000436324 INTS5Q6P9B9 1019 aaKnown RBP24.37■■□□□ 1.49
HMGN1-207ENST00000436324 RTF1Q92541 710 aaKnown RBP24.37■■□□□ 1.49
HMGN1-207ENST00000436324 VIRMAQ69YN4 1812 aaKnown RBP24.37■■□□□ 1.49
HMGN1-207ENST00000436324 MCM10Q7L590 875 aa24.36■■□□□ 1.49
HMGN1-207ENST00000436324 CCDC87Q9NVE4 849 aa24.36■■□□□ 1.49
HMGN1-207ENST00000436324 KCPQ6ZWJ8 1503 aa24.35■■□□□ 1.49
HMGN1-207ENST00000436324 TJP1Q07157 1748 aa24.35■■□□□ 1.49
HMGN1-207ENST00000436324 YY1P25490 414 aa24.35■■□□□ 1.49
HMGN1-207ENST00000436324 ZEB1P37275 1124 aaPredicted RBP24.35■■□□□ 1.49
HMGN1-207ENST00000436324 NEFMP07197 916 aa24.34■■□□□ 1.49
HMGN1-207ENST00000436324 MMP10P09238 476 aa24.34■■□□□ 1.49
HMGN1-207ENST00000436324 CYP19A1P11511 503 aaPredicted RBP24.34■■□□□ 1.49
HMGN1-207ENST00000436324 DCTN1Q14203 1278 aa24.34■■□□□ 1.49
HMGN1-207ENST00000436324 ZNF790Q6PG37 636 aa24.34■■□□□ 1.49
HMGN1-207ENST00000436324 SRP68Q9UHB9 627 aaKnown RBP24.34■■□□□ 1.49
HMGN1-207ENST00000436324 MYH14Q7Z406 1995 aaKnown RBP24.34■■□□□ 1.49
HMGN1-207ENST00000436324 CEMIPQ8WUJ3 1361 aa24.33■■□□□ 1.49
HMGN1-207ENST00000436324 BTBD11A6QL63 1104 aa24.33■■□□□ 1.49
HMGN1-207ENST00000436324 ZNF496Q96IT1 587 aaPredicted RBP24.33■■□□□ 1.49
HMGN1-207ENST00000436324 CD2APQ9Y5K6 639 aa24.33■■□□□ 1.49
HMGN1-207ENST00000436324 KCNQ3O43525 872 aa24.32■■□□□ 1.48
HMGN1-207ENST00000436324 GYS1P13807 737 aa24.32■■□□□ 1.48
HMGN1-207ENST00000436324 VSIG10Q8N0Z9 540 aa24.32■■□□□ 1.48
HMGN1-207ENST00000436324 NLGN1Q8N2Q7 840 aa24.32■■□□□ 1.48
HMGN1-207ENST00000436324 ZBTB1Q9Y2K1 713 aa24.3■■□□□ 1.48
HMGN1-207ENST00000436324 MYBBP1AQ9BQG0 1328 aaKnown RBP24.3■■□□□ 1.48
HMGN1-207ENST00000436324 CANXP27824 592 aaKnown RBP24.29■■□□□ 1.48
HMGN1-207ENST00000436324 PLEKHF1Q96S99 279 aa24.29■■□□□ 1.48
HMGN1-207ENST00000436324 SOS1Q07889 1333 aaPredicted RBP24.29■■□□□ 1.48
HMGN1-207ENST00000436324 FMNL2Q96PY5 1086 aa24.28■■□□□ 1.48
HMGN1-207ENST00000436324 CICQ96RK0 1608 aaPredicted RBP24.28■■□□□ 1.48
HMGN1-207ENST00000436324 HEG1Q9ULI3 1381 aa24.28■■□□□ 1.48
HMGN1-207ENST00000436324 HTATSF1O43719 755 aaKnown RBP24.27■■□□□ 1.48
HMGN1-207ENST00000436324 STARD3NLO95772 234 aa24.27■■□□□ 1.48
HMGN1-207ENST00000436324 FKBP8Q14318 412 aa24.27■■□□□ 1.48
HMGN1-207ENST00000436324 WWC3Q9ULE0 1092 aa24.27■■□□□ 1.48
HMGN1-207ENST00000436324 USP42Q9H9J4 1324 aaKnown RBP24.27■■□□□ 1.48
HMGN1-207ENST00000436324 ZPR1O75312 459 aa24.26■■□□□ 1.47
HMGN1-207ENST00000436324 PNNQ9H307 717 aaKnown RBP24.26■■□□□ 1.47
HMGN1-207ENST00000436324 PARP3Q9Y6F1 533 aa24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms