RNA–Protein interactions for RNA: ENST00000435022.5

HMG20B-205, Transcript of high mobility group 20B, humanhuman

TSL 5

Gene HMG20B, Length 616 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-205ENST00000435022 YBX3P16989 372 aaKnown RBP eCLIP30.56■■■□□ 2.48
HMG20B-205ENST00000435022 KNSTRNQ9Y448 316 aa30.56■■■□□ 2.48
HMG20B-205ENST00000435022 GOLGB1Q14789 3259 aaKnown RBP30.56■■■□□ 2.48
HMG20B-205ENST00000435022 COL5A3P25940 1745 aaPredicted RBP30.56■■■□□ 2.48
HMG20B-205ENST00000435022 IL13P35225 146 aa30.54■■■□□ 2.48
HMG20B-205ENST00000435022 ZNF530Q6P9A1 599 aaPredicted RBP30.54■■■□□ 2.48
HMG20B-205ENST00000435022 SSFA2P28290 1259 aa30.53■■■□□ 2.48
HMG20B-205ENST00000435022 ATP6V1AP38606 617 aa30.53■■■□□ 2.48
HMG20B-205ENST00000435022 PELP1Q8IZL8 1130 aaKnown RBP30.53■■■□□ 2.48
HMG20B-205ENST00000435022 ERVV-2B6SEH9 535 aa30.52■■■□□ 2.48
HMG20B-205ENST00000435022 HMGB2P26583 209 aaKnown RBP30.52■■■□□ 2.48
HMG20B-205ENST00000435022 PLEKHO1Q53GL0 409 aaPredicted RBP30.52■■■□□ 2.48
HMG20B-205ENST00000435022 DCAF5Q96JK2 942 aa30.52■■■□□ 2.48
HMG20B-205ENST00000435022 GNPATO15228 680 aa30.5■■■□□ 2.47
HMG20B-205ENST00000435022 PER1O15534 1290 aaPredicted RBP30.5■■■□□ 2.47
HMG20B-205ENST00000435022 SULT6B1Q6IMI4 303 aa30.5■■■□□ 2.47
HMG20B-205ENST00000435022 AMOTQ4VCS5 1084 aa30.48■■■□□ 2.47
HMG20B-205ENST00000435022 SCN11AQ9UI33 1791 aa30.47■■■□□ 2.47
HMG20B-205ENST00000435022 HSP90AB1P08238 724 aaKnown RBP30.47■■■□□ 2.47
HMG20B-205ENST00000435022 CD2APQ9Y5K6 639 aa30.47■■■□□ 2.47
HMG20B-205ENST00000435022 MYH14Q7Z406 1995 aaKnown RBP30.45■■■□□ 2.47
HMG20B-205ENST00000435022 TJP1Q07157 1748 aa30.44■■■□□ 2.46
HMG20B-205ENST00000435022 RBM42Q9BTD8 480 aaKnown RBP30.44■■■□□ 2.46
HMG20B-205ENST00000435022 CICQ96RK0 1608 aaPredicted RBP30.44■■■□□ 2.46
HMG20B-205ENST00000435022 C4AP0C0L4 1744 aa30.43■■■□□ 2.46
HMG20B-205ENST00000435022 MTHFSP49914 203 aa30.43■■■□□ 2.46
HMG20B-205ENST00000435022 CABP4P57796 275 aa30.42■■■□□ 2.46
HMG20B-205ENST00000435022 KIAA1551Q9HCM1 1747 aa30.42■■■□□ 2.46
HMG20B-205ENST00000435022 CNTNAP4Q9C0A0 1308 aa30.4■■■□□ 2.46
HMG20B-205ENST00000435022 COL3A1P02461 1466 aaPredicted RBP30.39■■■□□ 2.46
HMG20B-205ENST00000435022 VIRMAQ69YN4 1812 aaKnown RBP30.39■■■□□ 2.46
HMG20B-205ENST00000435022 C1orf141Q5JVX7 400 aa30.39■■■□□ 2.46
HMG20B-205ENST00000435022 KIF13BQ9NQT8 1826 aa30.38■■■□□ 2.45
HMG20B-205ENST00000435022 CC2D1BQ5T0F9 858 aaKnown RBP30.38■■■□□ 2.45
HMG20B-205ENST00000435022 NFATC2IPQ8NCF5 419 aa30.38■■■□□ 2.45
HMG20B-205ENST00000435022 ADAMTS7Q9UKP4 1686 aa30.38■■■□□ 2.45
HMG20B-205ENST00000435022 MRC1P22897 1456 aa30.38■■■□□ 2.45
HMG20B-205ENST00000435022 RC3H1Q5TC82 1133 aaKnown RBP30.37■■■□□ 2.45
HMG20B-205ENST00000435022 GRIN3BO60391 1043 aa30.36■■■□□ 2.45
HMG20B-205ENST00000435022 RTCBQ9Y3I0 505 aaKnown RBP30.36■■■□□ 2.45
HMG20B-205ENST00000435022 PTCD1O75127 700 aaKnown RBP30.35■■■□□ 2.45
HMG20B-205ENST00000435022 MMP10P09238 476 aa30.35■■■□□ 2.45
HMG20B-205ENST00000435022 HMOX1P09601 288 aa30.35■■■□□ 2.45
HMG20B-205ENST00000435022 ARHGEF1Q92888 912 aaKnown RBP30.35■■■□□ 2.45
HMG20B-205ENST00000435022 LGR6Q9HBX8 967 aa30.34■■■□□ 2.45
HMG20B-205ENST00000435022 WWC3Q9ULE0 1092 aa30.34■■■□□ 2.45
HMG20B-205ENST00000435022 RPS6KA4O75676 772 aa30.33■■■□□ 2.45
HMG20B-205ENST00000435022 NPC1L1Q9UHC9 1359 aa30.32■■■□□ 2.44
HMG20B-205ENST00000435022 AKAP4Q5JQC9 854 aa30.32■■■□□ 2.44
HMG20B-205ENST00000435022 TRAPPC3LQ5T215 181 aa30.32■■■□□ 2.44
HMG20B-205ENST00000435022 PXDNLA1KZ92 1463 aa30.31■■■□□ 2.44
HMG20B-205ENST00000435022 GYS1P13807 737 aa30.31■■■□□ 2.44
HMG20B-205ENST00000435022 ADRA2BP18089 450 aa30.3■■■□□ 2.44
HMG20B-205ENST00000435022 CRKLP46109 303 aaKnown RBP30.3■■■□□ 2.44
HMG20B-205ENST00000435022 N4BP2Q86UW6 1770 aaPredicted RBP30.3■■■□□ 2.44
HMG20B-205ENST00000435022 C10orf71Q711Q0 1435 aa30.3■■■□□ 2.44
HMG20B-205ENST00000435022 KCPQ6ZWJ8 1503 aa30.29■■■□□ 2.44
HMG20B-205ENST00000435022 MTHFSDQ2M296 383 aaKnown RBP30.28■■■□□ 2.44
HMG20B-205ENST00000435022 SLC52A2Q9HAB3 445 aa30.28■■■□□ 2.44
HMG20B-205ENST00000435022 ADCY9O60503 1353 aa30.28■■■□□ 2.44
HMG20B-205ENST00000435022 RNMTO43148 476 aaKnown RBP30.27■■■□□ 2.44
HMG20B-205ENST00000435022 DIAPH1O60610 1272 aaKnown RBP30.27■■■□□ 2.44
HMG20B-205ENST00000435022 C1QTNF8P60827 252 aa30.26■■■□□ 2.43
HMG20B-205ENST00000435022 ATP10DQ9P241 1426 aa30.25■■■□□ 2.43
HMG20B-205ENST00000435022 NLGN1Q8N2Q7 840 aa30.25■■■□□ 2.43
HMG20B-205ENST00000435022 SLC39A6Q13433 755 aa30.24■■■□□ 2.43
HMG20B-205ENST00000435022 CNGB1Q14028 1251 aaPredicted RBP30.24■■■□□ 2.43
HMG20B-205ENST00000435022 INTS5Q6P9B9 1019 aaKnown RBP30.24■■■□□ 2.43
HMG20B-205ENST00000435022 SRP68Q9UHB9 627 aaKnown RBP30.24■■■□□ 2.43
HMG20B-205ENST00000435022 UBR2Q8IWV8 1755 aa30.23■■■□□ 2.43
HMG20B-205ENST00000435022 RFC4P35249 363 aa30.23■■■□□ 2.43
HMG20B-205ENST00000435022 DNAJC10Q8IXB1 793 aa30.23■■■□□ 2.43
HMG20B-205ENST00000435022 BRCA1P38398 1863 aaKnown RBP30.22■■■□□ 2.43
HMG20B-205ENST00000435022 USP42Q9H9J4 1324 aaKnown RBP30.21■■■□□ 2.43
HMG20B-205ENST00000435022 GIGYF1O75420 1035 aaPredicted RBP30.18■■■□□ 2.42
HMG20B-205ENST00000435022 FKBP8Q14318 412 aa30.18■■■□□ 2.42
HMG20B-205ENST00000435022 SIPA1L3O60292 1781 aaPredicted RBP30.18■■■□□ 2.42
HMG20B-205ENST00000435022 A0A0G2JLW4 131 aa30.17■■■□□ 2.42
HMG20B-205ENST00000435022 DDR1Q08345 913 aa30.17■■■□□ 2.42
HMG20B-205ENST00000435022 CYP19A1P11511 503 aaPredicted RBP30.16■■■□□ 2.42
HMG20B-205ENST00000435022 CCDC87Q9NVE4 849 aa30.16■■■□□ 2.42
HMG20B-205ENST00000435022 SOS1Q07889 1333 aaPredicted RBP30.16■■■□□ 2.42
HMG20B-205ENST00000435022 TGFB2P61812 414 aa30.15■■■□□ 2.42
HMG20B-205ENST00000435022 U2SURPO15042 1029 aaKnown RBP30.13■■■□□ 2.41
HMG20B-205ENST00000435022 DPEP1P16444 411 aa30.13■■■□□ 2.41
HMG20B-205ENST00000435022 PARP3Q9Y6F1 533 aa30.13■■■□□ 2.41
HMG20B-205ENST00000435022 SENP3-EIF4A1A0A087X0R7 540 aa30.12■■■□□ 2.41
HMG20B-205ENST00000435022 KCNA3P22001 575 aa30.12■■■□□ 2.41
HMG20B-205ENST00000435022 IL17REQ8NFR9 667 aa30.11■■■□□ 2.41
HMG20B-205ENST00000435022 ZBTB1Q9Y2K1 713 aa30.11■■■□□ 2.41
HMG20B-205ENST00000435022 USPL1Q5W0Q7 1092 aa30.09■■■□□ 2.41
HMG20B-205ENST00000435022 COL15A1P39059 1388 aa30.08■■■□□ 2.41
HMG20B-205ENST00000435022 POLRMTO00411 1230 aaKnown RBP30.08■■■□□ 2.41
HMG20B-205ENST00000435022 TM4SF1P30408 202 aa30.08■■■□□ 2.41
HMG20B-205ENST00000435022 BCS1LQ9Y276 419 aa30.08■■■□□ 2.41
HMG20B-205ENST00000435022 ARFGEF1Q9Y6D6 1849 aa30.08■■■□□ 2.41
HMG20B-205ENST00000435022 PHACTR3Q96KR7 559 aa30.07■■■□□ 2.4
HMG20B-205ENST00000435022 AFDNP55196 1824 aaKnown RBP30.07■■■□□ 2.4
HMG20B-205ENST00000435022 NRXN2Q9P2S2 1712 aa30.07■■■□□ 2.4
HMG20B-205ENST00000435022 VSIG10Q8N0Z9 540 aa30.06■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms