RNA–Protein interactions for RNA: ENST00000434278.5

LMBR1-208, Transcript of limb development membrane protein 1, humanhuman

TSL 5

Gene LMBR1, Length 678 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-208ENST00000434278 AKAP4Q5JQC9 854 aa27.24■■□□□ 1.95
LMBR1-208ENST00000434278 AMIGO3Q86WK7 504 aa27.24■■□□□ 1.95
LMBR1-208ENST00000434278 U2SURPO15042 1029 aaKnown RBP27.23■■□□□ 1.95
LMBR1-208ENST00000434278 PPP2R1AP30153 589 aa27.23■■□□□ 1.95
LMBR1-208ENST00000434278 MTHFSDQ2M296 383 aaKnown RBP27.23■■□□□ 1.95
LMBR1-208ENST00000434278 AK7Q96M32 723 aa27.23■■□□□ 1.95
LMBR1-208ENST00000434278 SLC4A9Q96Q91 983 aa27.23■■□□□ 1.95
LMBR1-208ENST00000434278 SYT17Q9BSW7 474 aa27.23■■□□□ 1.95
LMBR1-208ENST00000434278 SCN11AQ9UI33 1791 aa27.22■■□□□ 1.95
LMBR1-208ENST00000434278 NFATC2IPQ8NCF5 419 aa27.22■■□□□ 1.95
LMBR1-208ENST00000434278 UBR3Q6ZT12 1888 aa27.21■■□□□ 1.95
LMBR1-208ENST00000434278 SMIM5Q71RC9 77 aa27.21■■□□□ 1.95
LMBR1-208ENST00000434278 FLAD1Q8NFF5 587 aa27.21■■□□□ 1.95
LMBR1-208ENST00000434278 POLD1P28340 1107 aa27.2■■□□□ 1.94
LMBR1-208ENST00000434278 RBM42Q9BTD8 480 aaKnown RBP27.2■■□□□ 1.94
LMBR1-208ENST00000434278 LGR6Q9HBX8 967 aa27.2■■□□□ 1.94
LMBR1-208ENST00000434278 CFAP53Q96M91 514 aa27.18■■□□□ 1.94
LMBR1-208ENST00000434278 ZNF831Q5JPB2 1677 aa27.17■■□□□ 1.94
LMBR1-208ENST00000434278 PHF14O94880 888 aa27.17■■□□□ 1.94
LMBR1-208ENST00000434278 MSL1Q68DK7 614 aa27.17■■□□□ 1.94
LMBR1-208ENST00000434278 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.16■■□□□ 1.94
LMBR1-208ENST00000434278 RNMTO43148 476 aaKnown RBP27.16■■□□□ 1.94
LMBR1-208ENST00000434278 MAP3K5Q99683 1374 aa27.16■■□□□ 1.94
LMBR1-208ENST00000434278 SLC52A2Q9HAB3 445 aa27.15■■□□□ 1.94
LMBR1-208ENST00000434278 VIRMAQ69YN4 1812 aaKnown RBP27.15■■□□□ 1.94
LMBR1-208ENST00000434278 ADAMTS7Q9UKP4 1686 aa27.14■■□□□ 1.94
LMBR1-208ENST00000434278 GNPATO15228 680 aa27.14■■□□□ 1.94
LMBR1-208ENST00000434278 SSFA2P28290 1259 aa27.14■■□□□ 1.94
LMBR1-208ENST00000434278 MRC1P22897 1456 aa27.13■■□□□ 1.93
LMBR1-208ENST00000434278 COL5A3P25940 1745 aaPredicted RBP27.13■■□□□ 1.93
LMBR1-208ENST00000434278 PTCD1O75127 700 aaKnown RBP27.13■■□□□ 1.93
LMBR1-208ENST00000434278 KLHL34Q8N239 644 aa27.12■■□□□ 1.93
LMBR1-208ENST00000434278 DCAF8L1A6NGE4 600 aa27.11■■□□□ 1.93
LMBR1-208ENST00000434278 RSPH6AQ9H0K4 717 aa27.11■■□□□ 1.93
LMBR1-208ENST00000434278 NUDCQ9Y266 331 aa27.1■■□□□ 1.93
LMBR1-208ENST00000434278 PRKAR2BP31323 418 aa27.09■■□□□ 1.93
LMBR1-208ENST00000434278 GAS2L2Q8NHY3 880 aa27.09■■□□□ 1.93
LMBR1-208ENST00000434278 PHACTR3Q96KR7 559 aa27.09■■□□□ 1.93
LMBR1-208ENST00000434278 RC3H1Q5TC82 1133 aaKnown RBP27.08■■□□□ 1.93
LMBR1-208ENST00000434278 CNTNAP4Q9C0A0 1308 aa27.08■■□□□ 1.93
LMBR1-208ENST00000434278 TJP1Q07157 1748 aa27.07■■□□□ 1.92
LMBR1-208ENST00000434278 U2AF1L5P0DN76 240 aaPredicted RBP27.07■■□□□ 1.92
LMBR1-208ENST00000434278 U2AF1Q01081 240 aaKnown RBP eCLIP27.07■■□□□ 1.92
LMBR1-208ENST00000434278 SLC39A6Q13433 755 aa27.07■■□□□ 1.92
LMBR1-208ENST00000434278 RTCBQ9Y3I0 505 aaKnown RBP27.06■■□□□ 1.92
LMBR1-208ENST00000434278 MYH14Q7Z406 1995 aaKnown RBP27.06■■□□□ 1.92
LMBR1-208ENST00000434278 CICQ96RK0 1608 aaPredicted RBP27.05■■□□□ 1.92
LMBR1-208ENST00000434278 GNAT3A8MTJ3 354 aa27.05■■□□□ 1.92
LMBR1-208ENST00000434278 IL17REQ8NFR9 667 aa27.05■■□□□ 1.92
LMBR1-208ENST00000434278 NLGN2Q8NFZ4 835 aa27.05■■□□□ 1.92
LMBR1-208ENST00000434278 TRAPPC3LQ5T215 181 aa27.04■■□□□ 1.92
LMBR1-208ENST00000434278 RPS6KA4O75676 772 aa27.03■■□□□ 1.92
LMBR1-208ENST00000434278 KCPQ6ZWJ8 1503 aa27.03■■□□□ 1.92
LMBR1-208ENST00000434278 CRKLP46109 303 aaKnown RBP27.02■■□□□ 1.92
LMBR1-208ENST00000434278 DDX10Q13206 875 aaKnown RBP27.02■■□□□ 1.92
LMBR1-208ENST00000434278 ARHGEF1Q92888 912 aaKnown RBP27.02■■□□□ 1.92
LMBR1-208ENST00000434278 FCHSD2O94868 740 aa27.01■■□□□ 1.91
LMBR1-208ENST00000434278 DNAJC10Q8IXB1 793 aa27.01■■□□□ 1.91
LMBR1-208ENST00000434278 ADRA2BP18089 450 aa27■■□□□ 1.91
LMBR1-208ENST00000434278 TEFQ10587 303 aa26.98■■□□□ 1.91
LMBR1-208ENST00000434278 INTS5Q6P9B9 1019 aaKnown RBP26.98■■□□□ 1.91
LMBR1-208ENST00000434278 SIPA1L3O60292 1781 aaPredicted RBP26.98■■□□□ 1.91
LMBR1-208ENST00000434278 UBR2Q8IWV8 1755 aa26.98■■□□□ 1.91
LMBR1-208ENST00000434278 CEMIPQ8WUJ3 1361 aa26.97■■□□□ 1.91
LMBR1-208ENST00000434278 YY1P25490 414 aa26.97■■□□□ 1.91
LMBR1-208ENST00000434278 C4AP0C0L4 1744 aa26.96■■□□□ 1.91
LMBR1-208ENST00000434278 CD2APQ9Y5K6 639 aa26.96■■□□□ 1.91
LMBR1-208ENST00000434278 CYP19A1P11511 503 aaPredicted RBP26.95■■□□□ 1.9
LMBR1-208ENST00000434278 RFC4P35249 363 aa26.95■■□□□ 1.9
LMBR1-208ENST00000434278 GPR162Q16538 588 aa26.95■■□□□ 1.9
LMBR1-208ENST00000434278 UTRNP46939 3433 aa26.94■■□□□ 1.9
LMBR1-208ENST00000434278 GYS1P13807 737 aa26.94■■□□□ 1.9
LMBR1-208ENST00000434278 RALBP1Q15311 655 aa26.94■■□□□ 1.9
LMBR1-208ENST00000434278 VSIG10Q8N0Z9 540 aa26.94■■□□□ 1.9
LMBR1-208ENST00000434278 CCDC87Q9NVE4 849 aa26.94■■□□□ 1.9
LMBR1-208ENST00000434278 MMP10P09238 476 aa26.93■■□□□ 1.9
LMBR1-208ENST00000434278 TTC5Q8N0Z6 440 aa26.93■■□□□ 1.9
LMBR1-208ENST00000434278 NLGN1Q8N2Q7 840 aa26.93■■□□□ 1.9
LMBR1-208ENST00000434278 ZNF790Q6PG37 636 aa26.92■■□□□ 1.9
LMBR1-208ENST00000434278 PELP1Q8IZL8 1130 aaKnown RBP26.92■■□□□ 1.9
LMBR1-208ENST00000434278 ZNF496Q96IT1 587 aaPredicted RBP26.91■■□□□ 1.9
LMBR1-208ENST00000434278 SRP68Q9UHB9 627 aaKnown RBP26.91■■□□□ 1.9
LMBR1-208ENST00000434278 MCM10Q7L590 875 aa26.9■■□□□ 1.9
LMBR1-208ENST00000434278 SOS1Q07889 1333 aaPredicted RBP26.9■■□□□ 1.9
LMBR1-208ENST00000434278 ZBTB1Q9Y2K1 713 aa26.89■■□□□ 1.9
LMBR1-208ENST00000434278 USP42Q9H9J4 1324 aaKnown RBP26.89■■□□□ 1.89
LMBR1-208ENST00000434278 HEG1Q9ULI3 1381 aa26.88■■□□□ 1.89
LMBR1-208ENST00000434278 KCNQ3O43525 872 aa26.88■■□□□ 1.89
LMBR1-208ENST00000434278 YBX3P16989 372 aaKnown RBP eCLIP26.88■■□□□ 1.893e-7■■■□□ 18.7
LMBR1-208ENST00000434278 DCTN1Q14203 1278 aa26.88■■□□□ 1.89
LMBR1-208ENST00000434278 RTF1Q92541 710 aaKnown RBP26.88■■□□□ 1.89
LMBR1-208ENST00000434278 PLEKHF1Q96S99 279 aa26.88■■□□□ 1.89
LMBR1-208ENST00000434278 BTBD11A6QL63 1104 aa26.87■■□□□ 1.89
LMBR1-208ENST00000434278 HTATSF1O43719 755 aaKnown RBP26.85■■□□□ 1.89
LMBR1-208ENST00000434278 FKBP8Q14318 412 aa26.85■■□□□ 1.89
LMBR1-208ENST00000434278 FMNL2Q96PY5 1086 aa26.84■■□□□ 1.89
LMBR1-208ENST00000434278 CHD4Q14839 1912 aa26.84■■□□□ 1.89
LMBR1-208ENST00000434278 STARD3NLO95772 234 aa26.83■■□□□ 1.89
LMBR1-208ENST00000434278 NEFMP07197 916 aa26.83■■□□□ 1.89
LMBR1-208ENST00000434278 CANXP27824 592 aaKnown RBP26.83■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms