RNA–Protein interactions for RNA: ENST00000434243.5

EDEM1-202, Transcript of ER degradation enhancing alpha-mannosidase like protein 1, humanhuman

TSL 2

Gene EDEM1, Length 978 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM1-202ENST00000434243 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.04■□□□□ 0.48
EDEM1-202ENST00000434243 GNPATO15228 680 aa18.04■□□□□ 0.48
EDEM1-202ENST00000434243 HMOX1P09601 288 aa18.04■□□□□ 0.48
EDEM1-202ENST00000434243 ITPK1Q13572 414 aa18.04■□□□□ 0.48
EDEM1-202ENST00000434243 QSER1Q2KHR3 1735 aa18.03■□□□□ 0.48
EDEM1-202ENST00000434243 AMIGO3Q86WK7 504 aa18.03■□□□□ 0.48
EDEM1-202ENST00000434243 NLGN2Q8NFZ4 835 aa18.03■□□□□ 0.48
EDEM1-202ENST00000434243 C5P01031 1676 aa18.03■□□□□ 0.48
EDEM1-202ENST00000434243 ITGB4P16144 1822 aa18.02■□□□□ 0.48
EDEM1-202ENST00000434243 DIAPH1O60610 1272 aaKnown RBP18.02■□□□□ 0.48
EDEM1-202ENST00000434243 SSFA2P28290 1259 aa18.02■□□□□ 0.48
EDEM1-202ENST00000434243 TUBGCP6Q96RT7 1819 aa18.02■□□□□ 0.47
EDEM1-202ENST00000434243 C4BP0C0L5 1744 aa18.01■□□□□ 0.47
EDEM1-202ENST00000434243 KDM6AO15550 1401 aaPredicted RBP18■□□□□ 0.47
EDEM1-202ENST00000434243 PTCD1O75127 700 aaKnown RBP18■□□□□ 0.47
EDEM1-202ENST00000434243 NFATC2IPQ8NCF5 419 aa18■□□□□ 0.47
EDEM1-202ENST00000434243 KDRP35968 1356 aa18■□□□□ 0.47
EDEM1-202ENST00000434243 AKAP4Q5JQC9 854 aa17.99■□□□□ 0.47
EDEM1-202ENST00000434243 U2SURPO15042 1029 aaKnown RBP17.98■□□□□ 0.47
EDEM1-202ENST00000434243 TRAPPC3LQ5T215 181 aa17.98■□□□□ 0.47
EDEM1-202ENST00000434243 SLC4A9Q96Q91 983 aa17.98■□□□□ 0.47
EDEM1-202ENST00000434243 RTCBQ9Y3I0 505 aaKnown RBP17.98■□□□□ 0.47
EDEM1-202ENST00000434243 NPC1L1Q9UHC9 1359 aa17.95■□□□□ 0.46
EDEM1-202ENST00000434243 MTHFSDQ2M296 383 aaKnown RBP17.95■□□□□ 0.46
EDEM1-202ENST00000434243 LGR6Q9HBX8 967 aa17.95■□□□□ 0.46
EDEM1-202ENST00000434243 CD2APQ9Y5K6 639 aa17.95■□□□□ 0.46
EDEM1-202ENST00000434243 TAF1LQ8IZX4 1826 aa17.95■□□□□ 0.46
EDEM1-202ENST00000434243 RNMTO43148 476 aaKnown RBP17.93■□□□□ 0.46
EDEM1-202ENST00000434243 RC3H1Q5TC82 1133 aaKnown RBP17.93■□□□□ 0.46
EDEM1-202ENST00000434243 ARHGEF1Q92888 912 aaKnown RBP17.93■□□□□ 0.46
EDEM1-202ENST00000434243 SLC52A2Q9HAB3 445 aa17.93■□□□□ 0.46
EDEM1-202ENST00000434243 CNTNAP4Q9C0A0 1308 aa17.93■□□□□ 0.46
EDEM1-202ENST00000434243 COL24A1Q17RW2 1714 aa17.92■□□□□ 0.46
EDEM1-202ENST00000434243 GRIN3BO60391 1043 aa17.92■□□□□ 0.46
EDEM1-202ENST00000434243 RPS6KA4O75676 772 aa17.92■□□□□ 0.46
EDEM1-202ENST00000434243 YBX3P16989 372 aaKnown RBP eCLIP17.92■□□□□ 0.46
EDEM1-202ENST00000434243 RFC4P35249 363 aa17.92■□□□□ 0.46
EDEM1-202ENST00000434243 ZNF784Q8NCA9 323 aaPredicted RBP17.92■□□□□ 0.46
EDEM1-202ENST00000434243 CFAP53Q96M91 514 aa17.92■□□□□ 0.46
EDEM1-202ENST00000434243 MMP10P09238 476 aa17.91■□□□□ 0.46
EDEM1-202ENST00000434243 WWC3Q9ULE0 1092 aa17.91■□□□□ 0.46
EDEM1-202ENST00000434243 ADRA2BP18089 450 aa17.9■□□□□ 0.46
EDEM1-202ENST00000434243 CRKLP46109 303 aaKnown RBP17.9■□□□□ 0.46
EDEM1-202ENST00000434243 SLC39A6Q13433 755 aa17.9■□□□□ 0.46
EDEM1-202ENST00000434243 NLGN1Q8N2Q7 840 aa17.9■□□□□ 0.46
EDEM1-202ENST00000434243 UBR3Q6ZT12 1888 aa17.89■□□□□ 0.45
EDEM1-202ENST00000434243 DNAJC10Q8IXB1 793 aa17.88■□□□□ 0.45
EDEM1-202ENST00000434243 GAS2L2Q8NHY3 880 aa17.87■□□□□ 0.45
EDEM1-202ENST00000434243 NUDCQ9Y266 331 aa17.87■□□□□ 0.45
EDEM1-202ENST00000434243 GYS1P13807 737 aa17.86■□□□□ 0.45
EDEM1-202ENST00000434243 PPP2R1AP30153 589 aa17.86■□□□□ 0.45
EDEM1-202ENST00000434243 PARP3Q9Y6F1 533 aa17.86■□□□□ 0.45
EDEM1-202ENST00000434243 GNAT3A8MTJ3 354 aa17.85■□□□□ 0.45
EDEM1-202ENST00000434243 COL3A1P02461 1466 aaPredicted RBP17.85■□□□□ 0.45
EDEM1-202ENST00000434243 PRKAR2BP31323 418 aa17.85■□□□□ 0.45
EDEM1-202ENST00000434243 TEFQ10587 303 aa17.85■□□□□ 0.45
EDEM1-202ENST00000434243 TTC5Q8N0Z6 440 aa17.85■□□□□ 0.45
EDEM1-202ENST00000434243 SRP68Q9UHB9 627 aaKnown RBP17.85■□□□□ 0.45
EDEM1-202ENST00000434243 U2AF1L5P0DN76 240 aaPredicted RBP17.84■□□□□ 0.45
EDEM1-202ENST00000434243 U2AF1Q01081 240 aaKnown RBP eCLIP17.84■□□□□ 0.45
EDEM1-202ENST00000434243 INTS5Q6P9B9 1019 aaKnown RBP17.84■□□□□ 0.45
EDEM1-202ENST00000434243 CCDC87Q9NVE4 849 aa17.84■□□□□ 0.45
EDEM1-202ENST00000434243 ZPR1O75312 459 aa17.82■□□□□ 0.44
EDEM1-202ENST00000434243 IL17REQ8NFR9 667 aa17.82■□□□□ 0.44
EDEM1-202ENST00000434243 ZNF831Q5JPB2 1677 aa17.81■□□□□ 0.44
EDEM1-202ENST00000434243 CYP19A1P11511 503 aaPredicted RBP17.81■□□□□ 0.44
EDEM1-202ENST00000434243 FKBP8Q14318 412 aa17.81■□□□□ 0.44
EDEM1-202ENST00000434243 PHACTR3Q96KR7 559 aa17.81■□□□□ 0.44
EDEM1-202ENST00000434243 RSPH6AQ9H0K4 717 aa17.81■□□□□ 0.44
EDEM1-202ENST00000434243 SCN11AQ9UI33 1791 aa17.81■□□□□ 0.44
EDEM1-202ENST00000434243 USP42Q9H9J4 1324 aaKnown RBP17.8■□□□□ 0.44
EDEM1-202ENST00000434243 A0A0G2JLW4 131 aa17.8■□□□□ 0.44
EDEM1-202ENST00000434243 TGFB2P61812 414 aa17.8■□□□□ 0.44
EDEM1-202ENST00000434243 VSIG10Q8N0Z9 540 aa17.8■□□□□ 0.44
EDEM1-202ENST00000434243 MRC1P22897 1456 aa17.8■□□□□ 0.44
EDEM1-202ENST00000434243 COL5A3P25940 1745 aaPredicted RBP17.79■□□□□ 0.44
EDEM1-202ENST00000434243 CANXP27824 592 aaKnown RBP17.79■□□□□ 0.44
EDEM1-202ENST00000434243 USPL1Q5W0Q7 1092 aa17.79■□□□□ 0.44
EDEM1-202ENST00000434243 ZBTB1Q9Y2K1 713 aa17.79■□□□□ 0.44
EDEM1-202ENST00000434243 CICQ96RK0 1608 aaPredicted RBP17.79■□□□□ 0.44
EDEM1-202ENST00000434243 SOS1Q07889 1333 aaPredicted RBP17.78■□□□□ 0.44
EDEM1-202ENST00000434243 ZNF790Q6PG37 636 aa17.78■□□□□ 0.44
EDEM1-202ENST00000434243 RTF1Q92541 710 aaKnown RBP17.78■□□□□ 0.44
EDEM1-202ENST00000434243 BCS1LQ9Y276 419 aa17.78■□□□□ 0.44
EDEM1-202ENST00000434243 CHD4Q14839 1912 aa17.77■□□□□ 0.44
EDEM1-202ENST00000434243 BTBD11A6QL63 1104 aa17.77■□□□□ 0.44
EDEM1-202ENST00000434243 STARD3NLO95772 234 aa17.77■□□□□ 0.44
EDEM1-202ENST00000434243 DPEP1P16444 411 aa17.77■□□□□ 0.44
EDEM1-202ENST00000434243 ZNF496Q96IT1 587 aaPredicted RBP17.77■□□□□ 0.44
EDEM1-202ENST00000434243 TJP1Q07157 1748 aa17.76■□□□□ 0.43
EDEM1-202ENST00000434243 FCHSD2O94868 740 aa17.76■□□□□ 0.43
EDEM1-202ENST00000434243 ZNF330Q9Y3S2 320 aaPredicted RBP17.76■□□□□ 0.43
EDEM1-202ENST00000434243 KCPQ6ZWJ8 1503 aa17.76■□□□□ 0.43
EDEM1-202ENST00000434243 GIGYF1O75420 1035 aaPredicted RBP17.75■□□□□ 0.43
EDEM1-202ENST00000434243 NEFMP07197 916 aa17.75■□□□□ 0.43
EDEM1-202ENST00000434243 DDR1Q08345 913 aa17.75■□□□□ 0.43
EDEM1-202ENST00000434243 FMNL2Q96PY5 1086 aa17.75■□□□□ 0.43
EDEM1-202ENST00000434243 NARFQ9UHQ1 456 aa17.75■□□□□ 0.43
EDEM1-202ENST00000434243 COL15A1P39059 1388 aa17.75■□□□□ 0.43
EDEM1-202ENST00000434243 MYH14Q7Z406 1995 aaKnown RBP17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms