RNA–Protein interactions for RNA: ENST00000433807.5

MCF2L-215, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-215ENST00000433807 TMPOP42166 694 aaKnown RBP17.26■□□□□ 0.35
MCF2L-215ENST00000433807 NFATC2IPQ8NCF5 419 aa17.26■□□□□ 0.35
MCF2L-215ENST00000433807 CEMIPQ8WUJ3 1361 aa17.26■□□□□ 0.35
MCF2L-215ENST00000433807 RIPK4P57078 832 aa17.24■□□□□ 0.35
MCF2L-215ENST00000433807 TEFQ10587 303 aa17.24■□□□□ 0.35
MCF2L-215ENST00000433807 TXNRD1Q16881 649 aa17.24■□□□□ 0.35
MCF2L-215ENST00000433807 PROM2Q8N271 834 aa17.24■□□□□ 0.35
MCF2L-215ENST00000433807 ATG3Q9NT62 314 aa17.24■□□□□ 0.35
MCF2L-215ENST00000433807 ASAP1Q9ULH1 1129 aa17.24■□□□□ 0.35
MCF2L-215ENST00000433807 PALLDQ8WX93 1383 aa17.24■□□□□ 0.35
MCF2L-215ENST00000433807 PAPPAQ13219 1627 aa17.23■□□□□ 0.35
MCF2L-215ENST00000433807 LMOD3Q0VAK6 560 aa17.23■□□□□ 0.35
MCF2L-215ENST00000433807 SLC27A3Q5K4L6 730 aa17.23■□□□□ 0.35
MCF2L-215ENST00000433807 MCM10Q7L590 875 aa17.23■□□□□ 0.35
MCF2L-215ENST00000433807 MIER1Q8N108 512 aa17.23■□□□□ 0.35
MCF2L-215ENST00000433807 TAF1LQ8IZX4 1826 aa17.22■□□□□ 0.35
MCF2L-215ENST00000433807 DCTN1Q14203 1278 aa17.22■□□□□ 0.35
MCF2L-215ENST00000433807 RRP7AQ9Y3A4 280 aaKnown RBP17.22■□□□□ 0.35
MCF2L-215ENST00000433807 APAF1O14727 1248 aa17.21■□□□□ 0.35
MCF2L-215ENST00000433807 FAM9BQ8IZU0 186 aa17.21■□□□□ 0.35
MCF2L-215ENST00000433807 ZNF831Q5JPB2 1677 aa17.2■□□□□ 0.34
MCF2L-215ENST00000433807 NEUROD2Q15784 382 aa17.2■□□□□ 0.34
MCF2L-215ENST00000433807 CCNL1Q9UK58 526 aaPredicted RBP17.2■□□□□ 0.34
MCF2L-215ENST00000433807 UBR2Q8IWV8 1755 aa17.2■□□□□ 0.34
MCF2L-215ENST00000433807 LOC102724428A0A0B4J2F2 783 aa17.19■□□□□ 0.34
MCF2L-215ENST00000433807 HMGB2P26583 209 aaKnown RBP17.19■□□□□ 0.34
MCF2L-215ENST00000433807 SIK1P57059 783 aa17.19■□□□□ 0.34
MCF2L-215ENST00000433807 LRRC4BQ9NT99 713 aa17.19■□□□□ 0.34
MCF2L-215ENST00000433807 C5P01031 1676 aa17.18■□□□□ 0.34
MCF2L-215ENST00000433807 NBPF14Q5TI25 921 aa17.18■□□□□ 0.34
MCF2L-215ENST00000433807 TRIM35Q9UPQ4 493 aa17.18■□□□□ 0.34
MCF2L-215ENST00000433807 BTBD11A6QL63 1104 aa17.17■□□□□ 0.34
MCF2L-215ENST00000433807 SLC39A6Q13433 755 aa17.17■□□□□ 0.34
MCF2L-215ENST00000433807 TAF7Q15545 349 aaPredicted RBP17.17■□□□□ 0.34
MCF2L-215ENST00000433807 THUMPD2Q9BTF0 503 aaKnown RBP17.17■□□□□ 0.34
MCF2L-215ENST00000433807 NCBP3Q53F19 620 aaKnown RBP17.16■□□□□ 0.34
MCF2L-215ENST00000433807 RBM42Q9BTD8 480 aaKnown RBP17.16■□□□□ 0.34
MCF2L-215ENST00000433807 KCPQ6ZWJ8 1503 aa17.16■□□□□ 0.34
MCF2L-215ENST00000433807 KDM3BQ7LBC6 1761 aa17.15■□□□□ 0.34
MCF2L-215ENST00000433807 CICQ96RK0 1608 aaPredicted RBP17.15■□□□□ 0.34
MCF2L-215ENST00000433807 ATP6V1AP38606 617 aa17.15■□□□□ 0.34
MCF2L-215ENST00000433807 KCNQ4P56696 695 aa17.15■□□□□ 0.34
MCF2L-215ENST00000433807 ZNF790Q6PG37 636 aa17.15■□□□□ 0.34
MCF2L-215ENST00000433807 TTC5Q8N0Z6 440 aa17.15■□□□□ 0.34
MCF2L-215ENST00000433807 COL5A3P25940 1745 aaPredicted RBP17.14■□□□□ 0.33
MCF2L-215ENST00000433807 PTCD1O75127 700 aaKnown RBP17.14■□□□□ 0.33
MCF2L-215ENST00000433807 ANO8Q9HCE9 1232 aaPredicted RBP17.14■□□□□ 0.33
MCF2L-215ENST00000433807 STK32BQ9NY57 414 aa17.14■□□□□ 0.33
MCF2L-215ENST00000433807 C4BP0C0L5 1744 aa17.13■□□□□ 0.33
MCF2L-215ENST00000433807 TJP1Q07157 1748 aa17.13■□□□□ 0.33
MCF2L-215ENST00000433807 QSER1Q2KHR3 1735 aa17.13■□□□□ 0.33
MCF2L-215ENST00000433807 CCDC27Q2M243 656 aa17.13■□□□□ 0.33
MCF2L-215ENST00000433807 SLC4A9Q96Q91 983 aa17.13■□□□□ 0.33
MCF2L-215ENST00000433807 BABAM1Q9NWV8 329 aa17.13■□□□□ 0.33
MCF2L-215ENST00000433807 TUBGCP6Q96RT7 1819 aa17.12■□□□□ 0.33
MCF2L-215ENST00000433807 MYH14Q7Z406 1995 aaKnown RBP17.12■□□□□ 0.33
MCF2L-215ENST00000433807 ITPK1Q13572 414 aa17.12■□□□□ 0.33
MCF2L-215ENST00000433807 VSIG10Q8N0Z9 540 aa17.12■□□□□ 0.33
MCF2L-215ENST00000433807 SRCAPQ6ZRS2 3230 aa17.11■□□□□ 0.33
MCF2L-215ENST00000433807 KCNQ3O43525 872 aa17.11■□□□□ 0.33
MCF2L-215ENST00000433807 CALD1Q05682 793 aaKnown RBP17.11■□□□□ 0.33
MCF2L-215ENST00000433807 SLC15A2Q16348 729 aa17.11■□□□□ 0.33
MCF2L-215ENST00000433807 NGEFQ8N5V2 710 aa17.11■□□□□ 0.33
MCF2L-215ENST00000433807 AKT1S1Q96B36 256 aa17.11■□□□□ 0.33
MCF2L-215ENST00000433807 ZNF496Q96IT1 587 aaPredicted RBP17.11■□□□□ 0.33
MCF2L-215ENST00000433807 FMNL2Q96PY5 1086 aa17.11■□□□□ 0.33
MCF2L-215ENST00000433807 UBR3Q6ZT12 1888 aa17.1■□□□□ 0.33
MCF2L-215ENST00000433807 ZNF827Q17R98 1081 aa17.1■□□□□ 0.33
MCF2L-215ENST00000433807 LINC00116Q8NCU8 138 aa17.1■□□□□ 0.33
MCF2L-215ENST00000433807 MIS18AQ9NYP9 233 aa17.1■□□□□ 0.33
MCF2L-215ENST00000433807 HEG1Q9ULI3 1381 aa17.1■□□□□ 0.33
MCF2L-215ENST00000433807 R3HDM1Q15032 1099 aaKnown RBP17.09■□□□□ 0.33
MCF2L-215ENST00000433807 TSPYL4Q9UJ04 414 aa17.09■□□□□ 0.33
MCF2L-215ENST00000433807 CNTNAP4Q9C0A0 1308 aa17.08■□□□□ 0.32
MCF2L-215ENST00000433807 SENP3-EIF4A1A0A087X0R7 540 aa17.08■□□□□ 0.32
MCF2L-215ENST00000433807 CHL1O00533 1208 aa17.08■□□□□ 0.32
MCF2L-215ENST00000433807 WWC1Q8IX03 1113 aa17.08■□□□□ 0.32
MCF2L-215ENST00000433807 DNAJC10Q8IXB1 793 aa17.08■□□□□ 0.32
MCF2L-215ENST00000433807 PSDA5PKW4 1024 aaPredicted RBP17.07■□□□□ 0.32
MCF2L-215ENST00000433807 RC3H1Q5TC82 1133 aaKnown RBP17.07■□□□□ 0.32
MCF2L-215ENST00000433807 AK7Q96M32 723 aa17.07■□□□□ 0.32
MCF2L-215ENST00000433807 CFAP44Q96MT7 982 aa17.07■□□□□ 0.32
MCF2L-215ENST00000433807 TEX13AQ9BXU3 409 aaPredicted RBP17.07■□□□□ 0.32
MCF2L-215ENST00000433807 EIF4A1P60842 406 aaKnown RBP17.06■□□□□ 0.32
MCF2L-215ENST00000433807 IFT57Q9NWB7 429 aa17.06■□□□□ 0.32
MCF2L-215ENST00000433807 TFCP2L1Q9NZI6 479 aa17.06■□□□□ 0.32
MCF2L-215ENST00000433807 SALL2Q9Y467 1007 aaPredicted RBP17.06■□□□□ 0.32
MCF2L-215ENST00000433807 LAS1LQ9Y4W2 734 aaKnown RBP17.06■□□□□ 0.32
MCF2L-215ENST00000433807 LAMB4A4D0S4 1761 aa17.06■□□□□ 0.32
MCF2L-215ENST00000433807 CASZ1Q86V15 1759 aa17.05■□□□□ 0.32
MCF2L-215ENST00000433807 SNRPA1P09661 255 aaKnown RBP17.05■□□□□ 0.32
MCF2L-215ENST00000433807 ZNF853P0CG23 659 aa17.05■□□□□ 0.32
MCF2L-215ENST00000433807 GNAI1P63096 354 aa17.05■□□□□ 0.32
MCF2L-215ENST00000433807 IL16Q14005 1332 aa17.04■□□□□ 0.32
MCF2L-215ENST00000433807 STARD3NLO95772 234 aa17.04■□□□□ 0.32
MCF2L-215ENST00000433807 CYP19A1P11511 503 aaPredicted RBP17.04■□□□□ 0.32
MCF2L-215ENST00000433807 CRKLP46109 303 aaKnown RBP17.04■□□□□ 0.32
MCF2L-215ENST00000433807 WDR63Q8IWG1 891 aa17.04■□□□□ 0.32
MCF2L-215ENST00000433807 PNPLA7Q6ZV29 1317 aa17.03■□□□□ 0.32
MCF2L-215ENST00000433807 GNPATO15228 680 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms