RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 U2SURPO15042 1029 aaKnown RBP23.68■■□□□ 1.38
NUP50-208ENST00000430547 FLAD1Q8NFF5 587 aa23.68■■□□□ 1.38
NUP50-208ENST00000430547 CFAP53Q96M91 514 aa23.68■■□□□ 1.38
NUP50-208ENST00000430547 ATG3Q9NT62 314 aa23.68■■□□□ 1.38
NUP50-208ENST00000430547 ATP6V1AP38606 617 aa23.67■■□□□ 1.38
NUP50-208ENST00000430547 AKAP4Q5JQC9 854 aa23.66■■□□□ 1.38
NUP50-208ENST00000430547 COL23A1Q86Y22 540 aaPredicted RBP23.66■■□□□ 1.38
NUP50-208ENST00000430547 FHDC1Q9C0D6 1143 aaPredicted RBP23.66■■□□□ 1.38
NUP50-208ENST00000430547 ZNF831Q5JPB2 1677 aa23.66■■□□□ 1.38
NUP50-208ENST00000430547 RBM42Q9BTD8 480 aaKnown RBP23.64■■□□□ 1.37
NUP50-208ENST00000430547 LINC00116Q8NCU8 138 aa23.63■■□□□ 1.37
NUP50-208ENST00000430547 PHF14O94880 888 aa23.62■■□□□ 1.37
NUP50-208ENST00000430547 KLHL34Q8N239 644 aa23.62■■□□□ 1.37
NUP50-208ENST00000430547 NFATC2IPQ8NCF5 419 aa23.62■■□□□ 1.37
NUP50-208ENST00000430547 SYT17Q9BSW7 474 aa23.62■■□□□ 1.37
NUP50-208ENST00000430547 COL5A3P25940 1745 aaPredicted RBP23.62■■□□□ 1.37
NUP50-208ENST00000430547 ITPK1Q13572 414 aa23.61■■□□□ 1.37
NUP50-208ENST00000430547 NUDCQ9Y266 331 aa23.6■■□□□ 1.37
NUP50-208ENST00000430547 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.59■■□□□ 1.37
NUP50-208ENST00000430547 GNPATO15228 680 aa23.59■■□□□ 1.37
NUP50-208ENST00000430547 SSFA2P28290 1259 aa23.59■■□□□ 1.37
NUP50-208ENST00000430547 PPP2R1AP30153 589 aa23.59■■□□□ 1.37
NUP50-208ENST00000430547 MTHFSDQ2M296 383 aaKnown RBP23.59■■□□□ 1.37
NUP50-208ENST00000430547 MSL1Q68DK7 614 aa23.59■■□□□ 1.37
NUP50-208ENST00000430547 MAP3K5Q99683 1374 aa23.59■■□□□ 1.37
NUP50-208ENST00000430547 PTCD1O75127 700 aaKnown RBP23.57■■□□□ 1.36
NUP50-208ENST00000430547 ADAMTS7Q9UKP4 1686 aa23.57■■□□□ 1.36
NUP50-208ENST00000430547 MRC1P22897 1456 aa23.56■■□□□ 1.36
NUP50-208ENST00000430547 RNMTO43148 476 aaKnown RBP23.56■■□□□ 1.36
NUP50-208ENST00000430547 GAS2L2Q8NHY3 880 aa23.56■■□□□ 1.36
NUP50-208ENST00000430547 SLC52A2Q9HAB3 445 aa23.56■■□□□ 1.36
NUP50-208ENST00000430547 LGR6Q9HBX8 967 aa23.55■■□□□ 1.36
NUP50-208ENST00000430547 AMIGO3Q86WK7 504 aa23.54■■□□□ 1.36
NUP50-208ENST00000430547 SLC4A9Q96Q91 983 aa23.54■■□□□ 1.36
NUP50-208ENST00000430547 RTCBQ9Y3I0 505 aaKnown RBP23.54■■□□□ 1.36
NUP50-208ENST00000430547 CICQ96RK0 1608 aaPredicted RBP23.54■■□□□ 1.36
NUP50-208ENST00000430547 TJP1Q07157 1748 aa23.53■■□□□ 1.36
NUP50-208ENST00000430547 U2AF1L5P0DN76 240 aaPredicted RBP23.52■■□□□ 1.36
NUP50-208ENST00000430547 U2AF1Q01081 240 aaKnown RBP eCLIP23.52■■□□□ 1.36
NUP50-208ENST00000430547 SMIM5Q71RC9 77 aa23.52■■□□□ 1.36
NUP50-208ENST00000430547 MYH14Q7Z406 1995 aaKnown RBP23.52■■□□□ 1.36
NUP50-208ENST00000430547 CNTNAP4Q9C0A0 1308 aa23.52■■□□□ 1.36
NUP50-208ENST00000430547 GNAT3A8MTJ3 354 aa23.51■■□□□ 1.35
NUP50-208ENST00000430547 PRKAR2BP31323 418 aa23.51■■□□□ 1.35
NUP50-208ENST00000430547 RC3H1Q5TC82 1133 aaKnown RBP23.51■■□□□ 1.35
NUP50-208ENST00000430547 TRAPPC3LQ5T215 181 aa23.5■■□□□ 1.35
NUP50-208ENST00000430547 RSPH6AQ9H0K4 717 aa23.49■■□□□ 1.35
NUP50-208ENST00000430547 C4AP0C0L4 1744 aa23.49■■□□□ 1.35
NUP50-208ENST00000430547 SIPA1L3O60292 1781 aaPredicted RBP23.48■■□□□ 1.35
NUP50-208ENST00000430547 UBR2Q8IWV8 1755 aa23.48■■□□□ 1.35
NUP50-208ENST00000430547 ADRA2BP18089 450 aa23.48■■□□□ 1.35
NUP50-208ENST00000430547 TEFQ10587 303 aa23.48■■□□□ 1.35
NUP50-208ENST00000430547 CHD4Q14839 1912 aa23.48■■□□□ 1.35
NUP50-208ENST00000430547 YY1P25490 414 aa23.47■■□□□ 1.35
NUP50-208ENST00000430547 SLC39A6Q13433 755 aa23.47■■□□□ 1.35
NUP50-208ENST00000430547 RPS6KA4O75676 772 aa23.46■■□□□ 1.35
NUP50-208ENST00000430547 CRKLP46109 303 aaKnown RBP23.46■■□□□ 1.35
NUP50-208ENST00000430547 GPR162Q16538 588 aa23.46■■□□□ 1.35
NUP50-208ENST00000430547 TTC5Q8N0Z6 440 aa23.46■■□□□ 1.35
NUP50-208ENST00000430547 KCPQ6ZWJ8 1503 aa23.45■■□□□ 1.34
NUP50-208ENST00000430547 FCHSD2O94868 740 aa23.45■■□□□ 1.34
NUP50-208ENST00000430547 RFC4P35249 363 aa23.45■■□□□ 1.34
NUP50-208ENST00000430547 PELP1Q8IZL8 1130 aaKnown RBP23.45■■□□□ 1.34
NUP50-208ENST00000430547 PHACTR3Q96KR7 559 aa23.45■■□□□ 1.34
NUP50-208ENST00000430547 NEFMP07197 916 aa23.44■■□□□ 1.34
NUP50-208ENST00000430547 NLGN2Q8NFZ4 835 aa23.44■■□□□ 1.34
NUP50-208ENST00000430547 DDX10Q13206 875 aaKnown RBP23.43■■□□□ 1.34
NUP50-208ENST00000430547 ARHGEF1Q92888 912 aaKnown RBP23.43■■□□□ 1.34
NUP50-208ENST00000430547 DNAJC10Q8IXB1 793 aa23.42■■□□□ 1.34
NUP50-208ENST00000430547 IL17REQ8NFR9 667 aa23.42■■□□□ 1.34
NUP50-208ENST00000430547 CD2APQ9Y5K6 639 aa23.42■■□□□ 1.34
NUP50-208ENST00000430547 NLGN1Q8N2Q7 840 aa23.41■■□□□ 1.34
NUP50-208ENST00000430547 RTF1Q92541 710 aaKnown RBP23.41■■□□□ 1.34
NUP50-208ENST00000430547 RALBP1Q15311 655 aa23.4■■□□□ 1.34
NUP50-208ENST00000430547 VSIG10Q8N0Z9 540 aa23.4■■□□□ 1.34
NUP50-208ENST00000430547 CCDC87Q9NVE4 849 aa23.4■■□□□ 1.34
NUP50-208ENST00000430547 DLG5Q8TDM6 1919 aa23.39■■□□□ 1.34
NUP50-208ENST00000430547 MMP10P09238 476 aa23.39■■□□□ 1.33
NUP50-208ENST00000430547 CEMIPQ8WUJ3 1361 aa23.39■■□□□ 1.33
NUP50-208ENST00000430547 INTS5Q6P9B9 1019 aaKnown RBP23.37■■□□□ 1.33
NUP50-208ENST00000430547 ZNF790Q6PG37 636 aa23.37■■□□□ 1.33
NUP50-208ENST00000430547 CYP19A1P11511 503 aaPredicted RBP23.36■■□□□ 1.33
NUP50-208ENST00000430547 GYS1P13807 737 aa23.36■■□□□ 1.33
NUP50-208ENST00000430547 KIF13BQ9NQT8 1826 aa23.36■■□□□ 1.33
NUP50-208ENST00000430547 BTBD11A6QL63 1104 aa23.35■■□□□ 1.33
NUP50-208ENST00000430547 PNNQ9H307 717 aaKnown RBP23.35■■□□□ 1.33
NUP50-208ENST00000430547 USP42Q9H9J4 1324 aaKnown RBP23.34■■□□□ 1.33
NUP50-208ENST00000430547 STARD3NLO95772 234 aa23.34■■□□□ 1.33
NUP50-208ENST00000430547 ZEB1P37275 1124 aaPredicted RBP23.34■■□□□ 1.33
NUP50-208ENST00000430547 HEG1Q9ULI3 1381 aa23.34■■□□□ 1.33
NUP50-208ENST00000430547 UTRNP46939 3433 aa23.34■■□□□ 1.33
NUP50-208ENST00000430547 ZPR1O75312 459 aa23.33■■□□□ 1.33
NUP50-208ENST00000430547 MCM10Q7L590 875 aa23.33■■□□□ 1.33
NUP50-208ENST00000430547 ZNF496Q96IT1 587 aaPredicted RBP23.33■■□□□ 1.33
NUP50-208ENST00000430547 FMNL2Q96PY5 1086 aa23.33■■□□□ 1.33
NUP50-208ENST00000430547 TEX13AQ9BXU3 409 aaPredicted RBP23.33■■□□□ 1.33
NUP50-208ENST00000430547 SRP68Q9UHB9 627 aaKnown RBP23.33■■□□□ 1.33
NUP50-208ENST00000430547 PARP3Q9Y6F1 533 aa23.33■■□□□ 1.33
NUP50-208ENST00000430547 SOS1Q07889 1333 aaPredicted RBP23.33■■□□□ 1.32
NUP50-208ENST00000430547 MAPK8IP3Q9UPT6 1336 aa23.33■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms