RNA–Protein interactions for RNA: ENST00000430085.5

CALD1-207, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-207ENST00000430085 SPG7Q9UQ90 795 aa18.13■□□□□ 0.49
CALD1-207ENST00000430085 PTPRCP08575 1304 aa18.13■□□□□ 0.49
CALD1-207ENST00000430085 RNMTO43148 476 aaKnown RBP18.13■□□□□ 0.49
CALD1-207ENST00000430085 SLC4A2P04920 1241 aa18.13■□□□□ 0.49
CALD1-207ENST00000430085 STK31Q9BXU1 1019 aa18.13■□□□□ 0.49
CALD1-207ENST00000430085 ZBTB40Q9NUA8 1239 aa18.12■□□□□ 0.49
CALD1-207ENST00000430085 PLEKHG2Q9H7P9 1386 aa18.12■□□□□ 0.49
CALD1-207ENST00000430085 CCDC30Q5VVM6 783 aa18.11■□□□□ 0.49
CALD1-207ENST00000430085 SKAP1Q86WV1 359 aa18.11■□□□□ 0.49
CALD1-207ENST00000430085 BTBD11A6QL63 1104 aa18.11■□□□□ 0.49
CALD1-207ENST00000430085 NGLY1Q96IV0 654 aa18.11■□□□□ 0.49
CALD1-207ENST00000430085 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.11■□□□□ 0.492e-7■■■□□ 15.9
CALD1-207ENST00000430085 MEGF6O75095 1541 aa18.11■□□□□ 0.49
CALD1-207ENST00000430085 VIRMAQ69YN4 1812 aaKnown RBP18.1■□□□□ 0.49
CALD1-207ENST00000430085 WDR17Q8IZU2 1322 aa18.1■□□□□ 0.49
CALD1-207ENST00000430085 KDM3BQ7LBC6 1761 aa18.1■□□□□ 0.49
CALD1-207ENST00000430085 TOM1L2Q6ZVM7 507 aa18.1■□□□□ 0.49
CALD1-207ENST00000430085 NWD2Q9ULI1 1742 aa18.09■□□□□ 0.49
CALD1-207ENST00000430085 COL5A2P05997 1499 aaPredicted RBP18.09■□□□□ 0.49
CALD1-207ENST00000430085 NRAPQ86VF7 1730 aa18.08■□□□□ 0.49
CALD1-207ENST00000430085 ZBTB7BO15156 539 aaPredicted RBP18.08■□□□□ 0.49
CALD1-207ENST00000430085 SLIT2O94813 1529 aa18.08■□□□□ 0.48
CALD1-207ENST00000430085 EIF4A1P60842 406 aaKnown RBP18.08■□□□□ 0.48
CALD1-207ENST00000430085 HDAC1Q13547 482 aaPredicted RBP18.08■□□□□ 0.48
CALD1-207ENST00000430085 CHMP4AQ9BY43 222 aa18.08■□□□□ 0.48
CALD1-207ENST00000430085 BTG4Q9NY30 223 aa18.08■□□□□ 0.48
CALD1-207ENST00000430085 AFF2P51816 1311 aa18.08■□□□□ 0.48
CALD1-207ENST00000430085 PHKG2P15735 406 aa18.07■□□□□ 0.48
CALD1-207ENST00000430085 RGS3P49796 1198 aa18.07■□□□□ 0.48
CALD1-207ENST00000430085 INTS3Q68E01 1043 aaKnown RBP18.07■□□□□ 0.48
CALD1-207ENST00000430085 IFNL2Q8IZJ0 200 aa18.07■□□□□ 0.48
CALD1-207ENST00000430085 ADAMTS7Q9UKP4 1686 aa18.06■□□□□ 0.48
CALD1-207ENST00000430085 RGS12O14924 1447 aa18.06■□□□□ 0.48
CALD1-207ENST00000430085 HOXB7P09629 217 aa18.06■□□□□ 0.48
CALD1-207ENST00000430085 EVA1CP58658 441 aa18.06■□□□□ 0.48
CALD1-207ENST00000430085 HDGFL1Q5TGJ6 251 aa18.06■□□□□ 0.48
CALD1-207ENST00000430085 FNBP4Q8N3X1 1017 aaPredicted RBP18.06■□□□□ 0.48
CALD1-207ENST00000430085 NECTIN2Q92692 538 aa18.06■□□□□ 0.48
CALD1-207ENST00000430085 PKD1L3Q7Z443 1732 aa18.05■□□□□ 0.48
CALD1-207ENST00000430085 BCL9LQ86UU0 1499 aa18.05■□□□□ 0.48
CALD1-207ENST00000430085 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.05■□□□□ 0.48
CALD1-207ENST00000430085 PARP4Q9UKK3 1724 aaKnown RBP18.05■□□□□ 0.48
CALD1-207ENST00000430085 G2E3Q7L622 706 aa18.04■□□□□ 0.48
CALD1-207ENST00000430085 STRN4Q9NRL3 753 aa18.04■□□□□ 0.48
CALD1-207ENST00000430085 USP21Q9UK80 565 aa18.04■□□□□ 0.48
CALD1-207ENST00000430085 SIPA1L3O60292 1781 aaPredicted RBP18.04■□□□□ 0.48
CALD1-207ENST00000430085 KCNQ3O43525 872 aa18.04■□□□□ 0.48
CALD1-207ENST00000430085 HSP90AB1P08238 724 aaKnown RBP18.04■□□□□ 0.48
CALD1-207ENST00000430085 SCN11AQ9UI33 1791 aa18.03■□□□□ 0.48
CALD1-207ENST00000430085 CACNA1FO60840 1977 aa18.03■□□□□ 0.48
CALD1-207ENST00000430085 PDE4AP27815 886 aa18.03■□□□□ 0.48
CALD1-207ENST00000430085 FLIIQ13045 1269 aa18.03■□□□□ 0.48
CALD1-207ENST00000430085 CARD10Q9BWT7 1032 aa18.03■□□□□ 0.48
CALD1-207ENST00000430085 KDM6AO15550 1401 aaPredicted RBP18.03■□□□□ 0.48
CALD1-207ENST00000430085 FKBP5Q13451 457 aaPredicted RBP18.02■□□□□ 0.48
CALD1-207ENST00000430085 DCAF5Q96JK2 942 aa18.02■□□□□ 0.48
CALD1-207ENST00000430085 EIF2S2P20042 333 aaKnown RBP18.02■□□□□ 0.47
CALD1-207ENST00000430085 UNC5CLQ8IV45 518 aa18.02■□□□□ 0.47
CALD1-207ENST00000430085 SLC52A2Q9HAB3 445 aa18.02■□□□□ 0.47
CALD1-207ENST00000430085 RGS17Q9UGC6 210 aaPredicted RBP18.02■□□□□ 0.47
CALD1-207ENST00000430085 CYP27B1O15528 508 aa18.01■□□□□ 0.47
CALD1-207ENST00000430085 CCT4P50991 539 aaKnown RBP18.01■□□□□ 0.47
CALD1-207ENST00000430085 LARP1Q6PKG0 1096 aaKnown RBP18.01■□□□□ 0.47
CALD1-207ENST00000430085 SLC4A10Q6U841 1118 aa18.01■□□□□ 0.47
CALD1-207ENST00000430085 C1orf115Q9H7X2 142 aa18.01■□□□□ 0.47
CALD1-207ENST00000430085 PDZRN3Q9UPQ7 1066 aa18.01■□□□□ 0.47
CALD1-207ENST00000430085 PCDH11XQ9BZA7 1347 aa18■□□□□ 0.47
CALD1-207ENST00000430085 PCDH11YQ9BZA8 1340 aa18■□□□□ 0.47
CALD1-207ENST00000430085 F6X3S4 739 aa18■□□□□ 0.47
CALD1-207ENST00000430085 IL2RBP14784 551 aa18■□□□□ 0.47
CALD1-207ENST00000430085 ZCRB1Q8TBF4 217 aaKnown RBP18■□□□□ 0.47
CALD1-207ENST00000430085 BACH2Q9BYV9 841 aa18■□□□□ 0.47
CALD1-207ENST00000430085 ZNF772Q68DY9 489 aaPredicted RBP17.98■□□□□ 0.47
CALD1-207ENST00000430085 SMC5Q8IY18 1101 aa17.98■□□□□ 0.47
CALD1-207ENST00000430085 NFATC2IPQ8NCF5 419 aa17.98■□□□□ 0.47
CALD1-207ENST00000430085 GIGYF1O75420 1035 aaPredicted RBP17.98■□□□□ 0.47
CALD1-207ENST00000430085 ATRNO75882 1429 aa17.97■□□□□ 0.47
CALD1-207ENST00000430085 MRC1P22897 1456 aa17.97■□□□□ 0.47
CALD1-207ENST00000430085 ZNF790Q6PG37 636 aa17.97■□□□□ 0.47
CALD1-207ENST00000430085 QTRT2Q9H974 415 aaKnown RBP17.97■□□□□ 0.47
CALD1-207ENST00000430085 CHPF2Q9P2E5 772 aa17.97■□□□□ 0.47
CALD1-207ENST00000430085 HEG1Q9ULI3 1381 aa17.96■□□□□ 0.47
CALD1-207ENST00000430085 FAM161AQ3B820 660 aa17.96■□□□□ 0.47
CALD1-207ENST00000430085 CABP4P57796 275 aa17.96■□□□□ 0.47
CALD1-207ENST00000430085 DBF4Q9UBU7 674 aaPredicted RBP17.96■□□□□ 0.47
CALD1-207ENST00000430085 TRPC5Q9UL62 973 aaPredicted RBP17.96■□□□□ 0.47
CALD1-207ENST00000430085 CCDC9Q9Y3X0 531 aaKnown RBP17.96■□□□□ 0.47
CALD1-207ENST00000430085 SLC39A6Q13433 755 aa17.95■□□□□ 0.46
CALD1-207ENST00000430085 VPS72Q15906 364 aa17.95■□□□□ 0.46
CALD1-207ENST00000430085 TTC5Q8N0Z6 440 aa17.95■□□□□ 0.46
CALD1-207ENST00000430085 GCC1Q96CN9 775 aa17.95■□□□□ 0.46
CALD1-207ENST00000430085 PHAXQ9H814 394 aaKnown RBP17.95■□□□□ 0.46
CALD1-207ENST00000430085 USP35Q9P2H5 1018 aa17.95■□□□□ 0.46
CALD1-207ENST00000430085 PXDNLA1KZ92 1463 aa17.95■□□□□ 0.46
CALD1-207ENST00000430085 POTEAQ6S8J7 498 aa17.94■□□□□ 0.46
CALD1-207ENST00000430085 MEIS3Q99687 375 aa17.94■□□□□ 0.46
CALD1-207ENST00000430085 GLI3P10071 1580 aa17.94■□□□□ 0.46
CALD1-207ENST00000430085 SIRT2Q8IXJ6 389 aa17.93■□□□□ 0.46
CALD1-207ENST00000430085 SPATA31A5Q5VU36 1347 aa17.93■□□□□ 0.46
CALD1-207ENST00000430085 SPATA31A7Q8IWB4 1347 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms