RNA–Protein interactions for RNA: ENST00000429344.6

CACTIN-203, Transcript of cactin, spliceosome C complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CACTIN, Length 3,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-203ENST00000429344 VIRMAQ69YN4 1812 aaKnown RBP18.24■□□□□ 0.51
CACTIN-203ENST00000429344 COL3A1P02461 1466 aaPredicted RBP18.24■□□□□ 0.51
CACTIN-203ENST00000429344 GNAT3A8MTJ3 354 aa18.24■□□□□ 0.51
CACTIN-203ENST00000429344 DTNBO60941 627 aa18.24■□□□□ 0.51
CACTIN-203ENST00000429344 HSPA2P54652 639 aa18.24■□□□□ 0.51
CACTIN-203ENST00000429344 NUCB2P80303 420 aa18.24■□□□□ 0.51
CACTIN-203ENST00000429344 RBSNQ9H1K0 784 aa18.23■□□□□ 0.51
CACTIN-203ENST00000429344 GDPD2Q9HCC8 539 aa18.23■□□□□ 0.51
CACTIN-203ENST00000429344 SDSP20132 328 aa18.23■□□□□ 0.51
CACTIN-203ENST00000429344 DDIT3P35638 169 aa18.23■□□□□ 0.51
CACTIN-203ENST00000429344 LRRC59Q96AG4 307 aaKnown RBP18.23■□□□□ 0.51
CACTIN-203ENST00000429344 C1orf141Q5JVX7 400 aa18.22■□□□□ 0.51
CACTIN-203ENST00000429344 CDC42BPGQ6DT37 1551 aa18.22■□□□□ 0.51
CACTIN-203ENST00000429344 NLRP2Q9NX02 1062 aa18.22■□□□□ 0.51
CACTIN-203ENST00000429344 SBNO1A3KN83 1393 aa18.22■□□□□ 0.51
CACTIN-203ENST00000429344 TTC22Q5TAA0 569 aa18.21■□□□□ 0.51
CACTIN-203ENST00000429344 ZNF530Q6P9A1 599 aaPredicted RBP18.21■□□□□ 0.51
CACTIN-203ENST00000429344 MEIS3Q99687 375 aa18.21■□□□□ 0.51
CACTIN-203ENST00000429344 EXOC6BQ9Y2D4 811 aa18.21■□□□□ 0.51
CACTIN-203ENST00000429344 AK9Q5TCS8 1911 aa18.21■□□□□ 0.51
CACTIN-203ENST00000429344 ANO2Q9NQ90 1003 aa18.21■□□□□ 0.5
CACTIN-203ENST00000429344 UPF3BQ9BZI7 483 aaKnown RBP18.19■□□□□ 0.5
CACTIN-203ENST00000429344 KRT28Q7Z3Y7 464 aa18.19■□□□□ 0.5
CACTIN-203ENST00000429344 LARP6Q9BRS8 491 aaKnown RBP18.19■□□□□ 0.5
CACTIN-203ENST00000429344 USP26Q9BXU7 913 aa18.19■□□□□ 0.5
CACTIN-203ENST00000429344 KCNH5Q8NCM2 988 aa18.18■□□□□ 0.5
CACTIN-203ENST00000429344 DDX17Q92841 729 aaKnown RBP18.18■□□□□ 0.5
CACTIN-203ENST00000429344 UBR1Q8IWV7 1749 aa18.18■□□□□ 0.5
CACTIN-203ENST00000429344 HDGFL1Q5TGJ6 251 aa18.18■□□□□ 0.5
CACTIN-203ENST00000429344 MPRIPQ6WCQ1 1025 aa18.18■□□□□ 0.5
CACTIN-203ENST00000429344 CHL1O00533 1208 aa18.17■□□□□ 0.5
CACTIN-203ENST00000429344 LMBRD1Q9NUN5 540 aa18.17■□□□□ 0.5
CACTIN-203ENST00000429344 NSFL1CQ9UNZ2 370 aaKnown RBP18.17■□□□□ 0.5
CACTIN-203ENST00000429344 NRXN3Q9Y4C0 1643 aa18.17■□□□□ 0.5
CACTIN-203ENST00000429344 MAP2P11137 1827 aaKnown RBP18.17■□□□□ 0.5
CACTIN-203ENST00000429344 REC8O95072 547 aa18.17■□□□□ 0.5
CACTIN-203ENST00000429344 TPM2P07951 284 aa18.17■□□□□ 0.5
CACTIN-203ENST00000429344 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.17■□□□□ 0.5
CACTIN-203ENST00000429344 ZNF853P0CG23 659 aa18.16■□□□□ 0.5
CACTIN-203ENST00000429344 MAP4K4O95819 1239 aaPredicted RBP18.16■□□□□ 0.5
CACTIN-203ENST00000429344 CCDC30Q5VVM6 783 aa18.16■□□□□ 0.5
CACTIN-203ENST00000429344 GCP02774 474 aa18.16■□□□□ 0.5
CACTIN-203ENST00000429344 ARHGAP45Q92619 1136 aa18.16■□□□□ 0.5
CACTIN-203ENST00000429344 DCTPP1Q9H773 170 aa18.15■□□□□ 0.5
CACTIN-203ENST00000429344 UQCRHLA0A096LP55 91 aa18.15■□□□□ 0.5
CACTIN-203ENST00000429344 HMMRO75330 724 aa18.15■□□□□ 0.5
CACTIN-203ENST00000429344 UQCRHP07919 91 aa18.15■□□□□ 0.5
CACTIN-203ENST00000429344 G2E3Q7L622 706 aa18.15■□□□□ 0.5
CACTIN-203ENST00000429344 GPT2Q8TD30 523 aa18.15■□□□□ 0.5
CACTIN-203ENST00000429344 TAF7Q15545 349 aaPredicted RBP18.14■□□□□ 0.49
CACTIN-203ENST00000429344 PLEKHO1Q53GL0 409 aaPredicted RBP18.14■□□□□ 0.49
CACTIN-203ENST00000429344 CABLES1Q8TDN4 633 aa18.14■□□□□ 0.49
CACTIN-203ENST00000429344 NBPF6Q5VWK0 638 aa18.14■□□□□ 0.49
CACTIN-203ENST00000429344 RAPGEF4Q8WZA2 1011 aa18.14■□□□□ 0.49
CACTIN-203ENST00000429344 NBPF4Q96M43 638 aa18.14■□□□□ 0.49
CACTIN-203ENST00000429344 TMEM63CQ9P1W3 806 aa18.14■□□□□ 0.49
CACTIN-203ENST00000429344 OVOS2A0A0J9YW53 1432 aa18.14■□□□□ 0.49
CACTIN-203ENST00000429344 OVOS2Q6IE36 1432 aa18.14■□□□□ 0.49
CACTIN-203ENST00000429344 NCOA3Q9Y6Q9 1424 aa18.14■□□□□ 0.49
CACTIN-203ENST00000429344 KIF20BQ96Q89 1820 aa18.13■□□□□ 0.49
CACTIN-203ENST00000429344 ERC2O15083 957 aa18.13■□□□□ 0.49
CACTIN-203ENST00000429344 ZNF830Q96NB3 372 aaPredicted RBP18.13■□□□□ 0.49
CACTIN-203ENST00000429344 A0A0G2JS52 829 aa18.13■□□□□ 0.49
CACTIN-203ENST00000429344 FER1L4A9Z1Z3 1794 aa18.12■□□□□ 0.49
CACTIN-203ENST00000429344 PTCH1Q13635 1447 aa18.12■□□□□ 0.49
CACTIN-203ENST00000429344 ANXA1P04083 346 aa18.12■□□□□ 0.49
CACTIN-203ENST00000429344 CEP85Q6P2H3 762 aa18.12■□□□□ 0.49
CACTIN-203ENST00000429344 ANKRD24Q8TF21 1146 aa18.12■□□□□ 0.49
CACTIN-203ENST00000429344 IP6K1Q92551 441 aa18.12■□□□□ 0.49
CACTIN-203ENST00000429344 ABCC4O15439 1325 aa18.11■□□□□ 0.49
CACTIN-203ENST00000429344 OS9Q13438 667 aaPredicted RBP18.11■□□□□ 0.49
CACTIN-203ENST00000429344 CHRNA2Q15822 529 aa18.11■□□□□ 0.49
CACTIN-203ENST00000429344 IL1RAPL2Q9NP60 686 aa18.11■□□□□ 0.49
CACTIN-203ENST00000429344 ARHGEF10O15013 1369 aa18.11■□□□□ 0.49
CACTIN-203ENST00000429344 ANKRD44Q8N8A2 993 aa18.11■□□□□ 0.49
CACTIN-203ENST00000429344 TMX3Q96JJ7 454 aa18.11■□□□□ 0.49
CACTIN-203ENST00000429344 C19orf44Q9H6X5 657 aa18.11■□□□□ 0.49
CACTIN-203ENST00000429344 IGSF1Q8N6C5 1336 aa18.1■□□□□ 0.49
CACTIN-203ENST00000429344 OFD1O75665 1012 aa18.1■□□□□ 0.49
CACTIN-203ENST00000429344 PPP1R9BQ96SB3 815 aa18.1■□□□□ 0.49
CACTIN-203ENST00000429344 NPHP4O75161 1426 aaPredicted RBP18.1■□□□□ 0.49
CACTIN-203ENST00000429344 BTBD11A6QL63 1104 aa18.1■□□□□ 0.49
CACTIN-203ENST00000429344 FLIIQ13045 1269 aa18.1■□□□□ 0.49
CACTIN-203ENST00000429344 CHMP3Q9Y3E7 222 aa18.1■□□□□ 0.49
CACTIN-203ENST00000429344 C3P01024 1663 aa18.1■□□□□ 0.49
CACTIN-203ENST00000429344 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.09■□□□□ 0.49
CACTIN-203ENST00000429344 IL17REQ8NFR9 667 aa18.09■□□□□ 0.49
CACTIN-203ENST00000429344 LGR6Q9HBX8 967 aa18.09■□□□□ 0.49
CACTIN-203ENST00000429344 ADGRB2O60241 1585 aa18.09■□□□□ 0.49
CACTIN-203ENST00000429344 DIP2AQ14689 1571 aa18.09■□□□□ 0.49
CACTIN-203ENST00000429344 PIK3R4Q99570 1358 aa18.09■□□□□ 0.49
CACTIN-203ENST00000429344 MCCP23508 829 aa18.09■□□□□ 0.49
CACTIN-203ENST00000429344 AIMP1Q12904 312 aaKnown RBP18.09■□□□□ 0.49
CACTIN-203ENST00000429344 MSH6P52701 1360 aa18.09■□□□□ 0.49
CACTIN-203ENST00000429344 PRDM10Q9NQV6 1147 aa18.09■□□□□ 0.49
CACTIN-203ENST00000429344 USP31Q70CQ4 1352 aa18.08■□□□□ 0.49
CACTIN-203ENST00000429344 ARHGAP23Q9P227 1491 aa18.08■□□□□ 0.49
CACTIN-203ENST00000429344 BCL11BQ9C0K0 894 aaPredicted RBP18.08■□□□□ 0.49
CACTIN-203ENST00000429344 CWC22Q9HCG8 908 aaKnown RBP18.08■□□□□ 0.49
CACTIN-203ENST00000429344 SETD1BQ9UPS6 1966 aaKnown RBP18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 117.3 ms