RNA–Protein interactions for RNA: ENST00000428761.1

LINC00348-201, long intergenic non-protein coding RNA 348, humanhuman

TSL 3 BASIC

Gene LINC00348, Length 948 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00348-201ENST00000428761 SVOPQ8N4V2 548 aa9.24□□□□□ -0.93
LINC00348-201ENST00000428761 RNF217Q8TC41 542 aa9.24□□□□□ -0.93
LINC00348-201ENST00000428761 SLC35F4A4IF30 521 aa9.23□□□□□ -0.93
LINC00348-201ENST00000428761 SKIP12755 728 aa9.23□□□□□ -0.93
LINC00348-201ENST00000428761 RNF144AP50876 292 aaPredicted RBP9.23□□□□□ -0.93
LINC00348-201ENST00000428761 KCNA1Q09470 495 aa9.23□□□□□ -0.93
LINC00348-201ENST00000428761 ZNF385CQ66K41 422 aaPredicted RBP9.23□□□□□ -0.93
LINC00348-201ENST00000428761 NFATC2IPQ8NCF5 419 aa9.23□□□□□ -0.93
LINC00348-201ENST00000428761 MTMR7Q9Y216 660 aa9.23□□□□□ -0.93
LINC00348-201ENST00000428761 RNF225M0QZC1 329 aaPredicted RBP9.22□□□□□ -0.93
LINC00348-201ENST00000428761 MEN1O00255 615 aa9.22□□□□□ -0.93
LINC00348-201ENST00000428761 GNRH1P01148 92 aa9.22□□□□□ -0.93
LINC00348-201ENST00000428761 ITGA6P23229 1130 aa9.22□□□□□ -0.93
LINC00348-201ENST00000428761 SV2AQ7L0J3 742 aa9.22□□□□□ -0.93
LINC00348-201ENST00000428761 UCN2Q96RP3 112 aa9.22□□□□□ -0.93
LINC00348-201ENST00000428761 PPP1R12CQ9BZL4 782 aa9.22□□□□□ -0.93
LINC00348-201ENST00000428761 ARHGEF10LQ9HCE6 1279 aa9.22□□□□□ -0.93
LINC00348-201ENST00000428761 CLN3Q13286 438 aa9.21□□□□□ -0.94
LINC00348-201ENST00000428761 SIRT1Q96EB6 747 aa9.21□□□□□ -0.94
LINC00348-201ENST00000428761 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.2□□□□□ -0.94
LINC00348-201ENST00000428761 TBC1D9Q6ZT07 1266 aa9.2□□□□□ -0.94
LINC00348-201ENST00000428761 WHAMMQ8TF30 809 aa9.2□□□□□ -0.94
LINC00348-201ENST00000428761 XAGE2Q96GT9 111 aa9.2□□□□□ -0.94
LINC00348-201ENST00000428761 RAB6BQ9NRW1 208 aa9.2□□□□□ -0.94
LINC00348-201ENST00000428761 STAU1O95793 577 aaKnown RBP9.19□□□□□ -0.94
LINC00348-201ENST00000428761 IL2RAP01589 272 aa9.19□□□□□ -0.94
LINC00348-201ENST00000428761 GRIP2Q9C0E4 1043 aa9.19□□□□□ -0.94
LINC00348-201ENST00000428761 HRH3Q9Y5N1 445 aa9.19□□□□□ -0.94
LINC00348-201ENST00000428761 LZTS3O60299 673 aaPredicted RBP9.18□□□□□ -0.94
LINC00348-201ENST00000428761 CSB-PGBD3P0DP91 1061 aa9.18□□□□□ -0.94
LINC00348-201ENST00000428761 RFX1P22670 979 aa9.18□□□□□ -0.94
LINC00348-201ENST00000428761 GPC1P35052 558 aa9.18□□□□□ -0.94
LINC00348-201ENST00000428761 DEPDC4Q8N2C3 294 aa9.18□□□□□ -0.94
LINC00348-201ENST00000428761 CNKSR1Q969H4 720 aa9.18□□□□□ -0.94
LINC00348-201ENST00000428761 NLRP3Q96P20 1036 aa9.18□□□□□ -0.94
LINC00348-201ENST00000428761 ESYT1Q9BSJ8 1104 aa9.18□□□□□ -0.94
LINC00348-201ENST00000428761 PCDHGA11Q9Y5H2 935 aa9.18□□□□□ -0.94
LINC00348-201ENST00000428761 USP17L5A8MUK1 530 aa9.17□□□□□ -0.94
LINC00348-201ENST00000428761 IRS1P35568 1242 aa9.17□□□□□ -0.94
LINC00348-201ENST00000428761 NCOA4Q13772 614 aa9.17□□□□□ -0.94
LINC00348-201ENST00000428761 LYSMD3Q7Z3D4 306 aa9.17□□□□□ -0.94
LINC00348-201ENST00000428761 PRICKLE2Q7Z3G6 844 aa9.17□□□□□ -0.94
LINC00348-201ENST00000428761 ETNK1Q9HBU6 452 aa9.17□□□□□ -0.94
LINC00348-201ENST00000428761 PALM3A6NDB9 673 aaPredicted RBP9.16□□□□□ -0.94
LINC00348-201ENST00000428761 ATP9BO43861 1147 aa9.16□□□□□ -0.94
LINC00348-201ENST00000428761 SLURP2P0DP57 97 aa9.16□□□□□ -0.94
LINC00348-201ENST00000428761 SCNN1DP51172 638 aa9.16□□□□□ -0.94
LINC00348-201ENST00000428761 MARSP56192 900 aaKnown RBP9.16□□□□□ -0.94
LINC00348-201ENST00000428761 CENPCQ03188 943 aa9.16□□□□□ -0.94
LINC00348-201ENST00000428761 EML3Q32P44 896 aa9.16□□□□□ -0.94
LINC00348-201ENST00000428761 SENP3-EIF4A1A0A087X0R7 540 aa9.15□□□□□ -0.94
LINC00348-201ENST00000428761 ARHGEF15O94989 841 aa9.15□□□□□ -0.94
LINC00348-201ENST00000428761 PLEKHM2Q8IWE5 1019 aa9.15□□□□□ -0.94
LINC00348-201ENST00000428761 TFIP11Q9UBB9 837 aaKnown RBP9.15□□□□□ -0.94
LINC00348-201ENST00000428761 NOD1Q9Y239 953 aa9.15□□□□□ -0.94
LINC00348-201ENST00000428761 RHOQP17081 205 aa9.14□□□□□ -0.95
LINC00348-201ENST00000428761 ESCO1Q5FWF5 840 aa9.14□□□□□ -0.95
LINC00348-201ENST00000428761 SLC27A3Q5K4L6 730 aa9.14□□□□□ -0.95
LINC00348-201ENST00000428761 FHDC1Q9C0D6 1143 aaPredicted RBP9.14□□□□□ -0.95
LINC00348-201ENST00000428761 USP17L3A6NCW0 530 aa9.13□□□□□ -0.95
LINC00348-201ENST00000428761 USP17L4A6NCW7 530 aa9.13□□□□□ -0.95
LINC00348-201ENST00000428761 ATG7O95352 703 aa9.13□□□□□ -0.95
LINC00348-201ENST00000428761 INHAP05111 366 aa9.13□□□□□ -0.95
LINC00348-201ENST00000428761 POU4F2Q12837 409 aa9.13□□□□□ -0.95
LINC00348-201ENST00000428761 GPAT2Q6NUI2 795 aa9.13□□□□□ -0.95
LINC00348-201ENST00000428761 USP17L2Q6R6M4 530 aa9.13□□□□□ -0.95
LINC00348-201ENST00000428761 USP17L1Q7RTZ2 530 aa9.13□□□□□ -0.95
LINC00348-201ENST00000428761 TMEM229AB2RXF0 380 aa9.12□□□□□ -0.95
LINC00348-201ENST00000428761 SPATA31C2B4DYI2 1134 aa9.12□□□□□ -0.95
LINC00348-201ENST00000428761 ZBTB7BO15156 539 aaPredicted RBP9.12□□□□□ -0.95
LINC00348-201ENST00000428761 ADAMTS2O95450 1211 aa9.12□□□□□ -0.95
LINC00348-201ENST00000428761 LMOD1P29536 600 aaPredicted RBP9.12□□□□□ -0.95
LINC00348-201ENST00000428761 GDF10P55107 478 aa9.12□□□□□ -0.95
LINC00348-201ENST00000428761 GTF2IP78347 998 aa9.12□□□□□ -0.95
LINC00348-201ENST00000428761 FOXD4L4Q8WXT5 416 aaPredicted RBP9.12□□□□□ -0.95
LINC00348-201ENST00000428761 WASLO00401 505 aaPredicted RBP9.11□□□□□ -0.95
LINC00348-201ENST00000428761 NBPF10Q6P3W6 841 aaKnown RBP9.11□□□□□ -0.95
LINC00348-201ENST00000428761 LYPD4Q6UWN0 246 aa9.11□□□□□ -0.95
LINC00348-201ENST00000428761 NBPF15Q8N660 670 aa9.11□□□□□ -0.95
LINC00348-201ENST00000428761 CUEDC1Q9NWM3 386 aaPredicted RBP9.11□□□□□ -0.95
LINC00348-201ENST00000428761 TMEM88BA6NKF7 163 aa9.1□□□□□ -0.95
LINC00348-201ENST00000428761 ZSCAN10Q96SZ4 725 aaPredicted RBP9.1□□□□□ -0.95
LINC00348-201ENST00000428761 VRTNQ9H8Y1 702 aa9.1□□□□□ -0.95
LINC00348-201ENST00000428761 MKRN1Q9UHC7 482 aaKnown RBP9.1□□□□□ -0.95
LINC00348-201ENST00000428761 MAFBQ9Y5Q3 323 aaPredicted RBP9.1□□□□□ -0.95
LINC00348-201ENST00000428761 CLDN10P78369 228 aa9.09□□□□□ -0.95
LINC00348-201ENST00000428761 MAP3K10Q02779 954 aa9.09□□□□□ -0.95
LINC00348-201ENST00000428761 WDR44Q5JSH3 913 aa9.09□□□□□ -0.95
LINC00348-201ENST00000428761 SCARF2Q96GP6 870 aaPredicted RBP9.09□□□□□ -0.95
LINC00348-201ENST00000428761 SLC4A9Q96Q91 983 aa9.09□□□□□ -0.95
LINC00348-201ENST00000428761 DNMT3AQ9Y6K1 912 aaPredicted RBP9.09□□□□□ -0.95
LINC00348-201ENST00000428761 CARNS1A5YM72 827 aa9.08□□□□□ -0.96
LINC00348-201ENST00000428761 SRSF11Q05519 484 aaKnown RBP9.08□□□□□ -0.96
LINC00348-201ENST00000428761 TRIM50Q86XT4 487 aa9.08□□□□□ -0.96
LINC00348-201ENST00000428761 SERTAD1Q9UHV2 236 aa9.08□□□□□ -0.96
LINC00348-201ENST00000428761 KIAA1024Q9UPX6 916 aa9.08□□□□□ -0.96
LINC00348-201ENST00000428761 SMTNP53814 917 aa9.07□□□□□ -0.96
LINC00348-201ENST00000428761 TLR1Q15399 786 aa9.07□□□□□ -0.96
LINC00348-201ENST00000428761 KANK3Q6NY19 840 aa9.07□□□□□ -0.96
LINC00348-201ENST00000428761 TAS1R3Q7RTX0 852 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms