RNA–Protein interactions for RNA: ENST00000428450.5

DDX39B-209, Transcript of DExD-box helicase 39B, humanhuman

TSL 4

Gene DDX39B, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-209ENST00000428450 SLC34A2O95436 690 aa16.36■□□□□ 0.21
DDX39B-209ENST00000428450 RRS1Q15050 365 aaKnown RBP16.36■□□□□ 0.21
DDX39B-209ENST00000428450 KDM2BQ8NHM5 1336 aa16.36■□□□□ 0.21
DDX39B-209ENST00000428450 NKX1-1Q15270 411 aaPredicted RBP16.35■□□□□ 0.21
DDX39B-209ENST00000428450 PUS7Q96PZ0 661 aaKnown RBP16.35■□□□□ 0.21
DDX39B-209ENST00000428450 BRCA1P38398 1863 aaKnown RBP16.35■□□□□ 0.21
DDX39B-209ENST00000428450 NLGN1Q8N2Q7 840 aa16.34■□□□□ 0.21
DDX39B-209ENST00000428450 SMC1BQ8NDV3 1235 aa16.34■□□□□ 0.21
DDX39B-209ENST00000428450 TMF1P82094 1093 aa16.33■□□□□ 0.2
DDX39B-209ENST00000428450 ASAP1Q9ULH1 1129 aa16.33■□□□□ 0.2
DDX39B-209ENST00000428450 ATP6V1AP38606 617 aa16.32■□□□□ 0.2
DDX39B-209ENST00000428450 HSP90AB2PQ58FF8 381 aa16.32■□□□□ 0.2
DDX39B-209ENST00000428450 DCAF5Q96JK2 942 aa16.32■□□□□ 0.2
DDX39B-209ENST00000428450 SIN3AQ96ST3 1273 aa16.32■□□□□ 0.2
DDX39B-209ENST00000428450 CCDC87Q9NVE4 849 aa16.32■□□□□ 0.2
DDX39B-209ENST00000428450 RNF181Q9P0P0 153 aa16.32■□□□□ 0.2
DDX39B-209ENST00000428450 PKD1L3Q7Z443 1732 aa16.31■□□□□ 0.2
DDX39B-209ENST00000428450 SMG6Q86US8 1419 aaKnown RBP16.31■□□□□ 0.2
DDX39B-209ENST00000428450 TRAPPC3LQ5T215 181 aa16.31■□□□□ 0.2
DDX39B-209ENST00000428450 ARFGEF1Q9Y6D6 1849 aa16.31■□□□□ 0.2
DDX39B-209ENST00000428450 INSRP06213 1382 aa16.3■□□□□ 0.2
DDX39B-209ENST00000428450 GYS1P13807 737 aa16.3■□□□□ 0.2
DDX39B-209ENST00000428450 ARHGEF1Q92888 912 aaKnown RBP16.3■□□□□ 0.2
DDX39B-209ENST00000428450 PIM2Q9P1W9 311 aa16.3■□□□□ 0.2
DDX39B-209ENST00000428450 C4AP0C0L4 1744 aa16.29■□□□□ 0.2
DDX39B-209ENST00000428450 CARD11Q9BXL7 1154 aa16.29■□□□□ 0.2
DDX39B-209ENST00000428450 RTCBQ9Y3I0 505 aaKnown RBP16.29■□□□□ 0.2
DDX39B-209ENST00000428450 TNRC6CQ9HCJ0 1690 aaKnown RBP16.28■□□□□ 0.2
DDX39B-209ENST00000428450 FYB1O15117 783 aa16.28■□□□□ 0.2
DDX39B-209ENST00000428450 ATG3Q9NT62 314 aa16.28■□□□□ 0.2
DDX39B-209ENST00000428450 TMOD3Q9NYL9 352 aa16.28■□□□□ 0.2
DDX39B-209ENST00000428450 DALRD3Q5D0E6 543 aaKnown RBP16.27■□□□□ 0.2
DDX39B-209ENST00000428450 SLC4A9Q96Q91 983 aa16.27■□□□□ 0.2
DDX39B-209ENST00000428450 GGNBP2Q9H3C7 697 aa16.27■□□□□ 0.2
DDX39B-209ENST00000428450 PARP3Q9Y6F1 533 aa16.27■□□□□ 0.2
DDX39B-209ENST00000428450 SBF1O95248 1867 aa16.27■□□□□ 0.19
DDX39B-209ENST00000428450 ADRA2BP18089 450 aa16.26■□□□□ 0.19
DDX39B-209ENST00000428450 KDRP35968 1356 aa16.26■□□□□ 0.19
DDX39B-209ENST00000428450 RC3H1Q5TC82 1133 aaKnown RBP16.25■□□□□ 0.19
DDX39B-209ENST00000428450 NCAPD2Q15021 1401 aa16.25■□□□□ 0.19
DDX39B-209ENST00000428450 FLT4P35916 1363 aa16.25■□□□□ 0.19
DDX39B-209ENST00000428450 VEGFAP15692 232 aaPredicted RBP16.24■□□□□ 0.19
DDX39B-209ENST00000428450 SPG7Q9UQ90 795 aa16.24■□□□□ 0.19
DDX39B-209ENST00000428450 ZC3H4Q9UPT8 1303 aaKnown RBP16.23■□□□□ 0.19
DDX39B-209ENST00000428450 GLTPD2A6NH11 291 aa16.23■□□□□ 0.19
DDX39B-209ENST00000428450 RPS6KA4O75676 772 aa16.23■□□□□ 0.19
DDX39B-209ENST00000428450 CHRNA5P30532 468 aa16.23■□□□□ 0.19
DDX39B-209ENST00000428450 RFC4P35249 363 aa16.23■□□□□ 0.19
DDX39B-209ENST00000428450 NEUROD1Q13562 356 aa16.23■□□□□ 0.19
DDX39B-209ENST00000428450 TESK2Q96S53 571 aa16.23■□□□□ 0.19
DDX39B-209ENST00000428450 KIF24Q5T7B8 1368 aa16.23■□□□□ 0.19
DDX39B-209ENST00000428450 KDM6AO15550 1401 aaPredicted RBP16.22■□□□□ 0.19
DDX39B-209ENST00000428450 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.22■□□□□ 0.191e-19■□□□□ 9.2
DDX39B-209ENST00000428450 CNTNAP4Q9C0A0 1308 aa16.21■□□□□ 0.19
DDX39B-209ENST00000428450 POTECB2RU33 542 aa16.21■□□□□ 0.19
DDX39B-209ENST00000428450 PHKG2P15735 406 aa16.21■□□□□ 0.19
DDX39B-209ENST00000428450 RASSF7Q02833 373 aa16.21■□□□□ 0.19
DDX39B-209ENST00000428450 DDR1Q08345 913 aa16.21■□□□□ 0.19
DDX39B-209ENST00000428450 IFNL2Q8IZJ0 200 aa16.2■□□□□ 0.18
DDX39B-209ENST00000428450 TONSLQ96HA7 1378 aa16.2■□□□□ 0.18
DDX39B-209ENST00000428450 FOXN1O15353 648 aa16.19■□□□□ 0.18
DDX39B-209ENST00000428450 FKBP8Q14318 412 aa16.19■□□□□ 0.18
DDX39B-209ENST00000428450 RBM42Q9BTD8 480 aaKnown RBP16.19■□□□□ 0.18
DDX39B-209ENST00000428450 EMILIN1Q9Y6C2 1016 aa16.19■□□□□ 0.18
DDX39B-209ENST00000428450 MYH14Q7Z406 1995 aaKnown RBP16.18■□□□□ 0.18
DDX39B-209ENST00000428450 ZNF831Q5JPB2 1677 aa16.18■□□□□ 0.18
DDX39B-209ENST00000428450 LMNB1P20700 586 aa16.18■□□□□ 0.18
DDX39B-209ENST00000428450 PRDM10Q9NQV6 1147 aa16.18■□□□□ 0.18
DDX39B-209ENST00000428450 SRP68Q9UHB9 627 aaKnown RBP16.18■□□□□ 0.18
DDX39B-209ENST00000428450 COL5A3P25940 1745 aaPredicted RBP16.17■□□□□ 0.18
DDX39B-209ENST00000428450 EYA1Q99502 592 aa16.17■□□□□ 0.18
DDX39B-209ENST00000428450 ST20-MTHFSA0A0A6YYL1 179 aa16.16■□□□□ 0.18
DDX39B-209ENST00000428450 POLRMTO00411 1230 aaKnown RBP16.16■□□□□ 0.18
DDX39B-209ENST00000428450 CREBZFQ9NS37 354 aa16.16■□□□□ 0.18
DDX39B-209ENST00000428450 MKRN1Q9UHC7 482 aaKnown RBP16.16■□□□□ 0.18
DDX39B-209ENST00000428450 USP42Q9H9J4 1324 aaKnown RBP16.16■□□□□ 0.18
DDX39B-209ENST00000428450 TM4SF1P30408 202 aa16.15■□□□□ 0.18
DDX39B-209ENST00000428450 ERVV-2B6SEH9 535 aa16.14■□□□□ 0.17
DDX39B-209ENST00000428450 PCDH10Q9P2E7 1040 aa16.14■□□□□ 0.17
DDX39B-209ENST00000428450 CRKLP46109 303 aaKnown RBP16.13■□□□□ 0.17
DDX39B-209ENST00000428450 WASHC2AQ641Q2 1341 aa16.13■□□□□ 0.17
DDX39B-209ENST00000428450 NFKBIEO00221 500 aa16.11■□□□□ 0.17
DDX39B-209ENST00000428450 SLC24A1O60721 1099 aa16.11■□□□□ 0.17
DDX39B-209ENST00000428450 FAM161AQ3B820 660 aa16.11■□□□□ 0.17
DDX39B-209ENST00000428450 CNTNAP1P78357 1384 aa16.11■□□□□ 0.17
DDX39B-209ENST00000428450 PPM1GO15355 546 aaPredicted RBP16.1■□□□□ 0.17
DDX39B-209ENST00000428450 CTCFP49711 727 aaPredicted RBP16.1■□□□□ 0.17
DDX39B-209ENST00000428450 CHADLQ6NUI6 762 aa16.1■□□□□ 0.17
DDX39B-209ENST00000428450 POTEIP0CG38 1075 aa16.09■□□□□ 0.17
DDX39B-209ENST00000428450 POTEJP0CG39 1038 aa16.09■□□□□ 0.17
DDX39B-209ENST00000428450 DPY19L2Q6NUT2 758 aa16.09■□□□□ 0.17
DDX39B-209ENST00000428450 ADAMTS7Q9UKP4 1686 aa16.08■□□□□ 0.17
DDX39B-209ENST00000428450 TIAM2Q8IVF5 1701 aa16.08■□□□□ 0.17
DDX39B-209ENST00000428450 KIF20BQ96Q89 1820 aa16.08■□□□□ 0.17
DDX39B-209ENST00000428450 CCDC88AQ3V6T2 1871 aa16.08■□□□□ 0.17
DDX39B-209ENST00000428450 PTCD1O75127 700 aaKnown RBP16.08■□□□□ 0.16
DDX39B-209ENST00000428450 INTS5Q6P9B9 1019 aaKnown RBP16.08■□□□□ 0.16
DDX39B-209ENST00000428450 TTLL6Q8N841 843 aa16.08■□□□□ 0.16
DDX39B-209ENST00000428450 CARD14Q9BXL6 1004 aa16.08■□□□□ 0.16
DDX39B-209ENST00000428450 LBX1P52954 281 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms