RNA–Protein interactions for RNA: ENST00000428135.7

SNX13-203, Transcript of sorting nexin 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX13, Length 6,357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-203ENST00000428135 HSP90AB2PQ58FF8 381 aa11.55□□□□□ -0.56
SNX13-203ENST00000428135 RPGRQ92834 1020 aaKnown RBP11.55□□□□□ -0.56
SNX13-203ENST00000428135 ZNF622Q969S3 477 aaKnown RBP eCLIP11.55□□□□□ -0.562e-6■■■■□ 19.6
SNX13-203ENST00000428135 LRRC59Q96AG4 307 aaKnown RBP11.55□□□□□ -0.56
SNX13-203ENST00000428135 ORAI2Q96SN7 254 aa11.55□□□□□ -0.56
SNX13-203ENST00000428135 C6orf229H3BNL8 230 aa11.55□□□□□ -0.56
SNX13-203ENST00000428135 PPFIA3O75145 1194 aa11.55□□□□□ -0.56
SNX13-203ENST00000428135 LRPPRCP42704 1394 aaKnown RBP11.55□□□□□ -0.56
SNX13-203ENST00000428135 ME1P48163 572 aa11.55□□□□□ -0.56
SNX13-203ENST00000428135 CRACR2BQ8N4Y2 399 aaPredicted RBP11.55□□□□□ -0.56
SNX13-203ENST00000428135 NFKBIBQ15653 356 aa11.55□□□□□ -0.56
SNX13-203ENST00000428135 WWC2Q6AWC2 1192 aa11.55□□□□□ -0.56
SNX13-203ENST00000428135 ZNF76P36508 570 aa11.55□□□□□ -0.56
SNX13-203ENST00000428135 TRIM22Q8IYM9 498 aa11.55□□□□□ -0.56
SNX13-203ENST00000428135 AK7Q96M32 723 aa11.55□□□□□ -0.56
SNX13-203ENST00000428135 UHRF1BP1Q6BDS2 1440 aa11.55□□□□□ -0.56
SNX13-203ENST00000428135 TXLNAP40222 546 aa11.54□□□□□ -0.56
SNX13-203ENST00000428135 MATR3P43243 847 aaKnown RBP eCLIP11.54□□□□□ -0.565e-6■■■■□ 24.5
SNX13-203ENST00000428135 PDE3AQ14432 1141 aa11.54□□□□□ -0.56
SNX13-203ENST00000428135 PBRM1Q86U86 1689 aa11.54□□□□□ -0.56
SNX13-203ENST00000428135 TRIM5Q9C035 493 aa11.54□□□□□ -0.56
SNX13-203ENST00000428135 C19orf44Q9H6X5 657 aa11.54□□□□□ -0.56
SNX13-203ENST00000428135 TNNT3P45378 269 aaPredicted RBP11.54□□□□□ -0.56
SNX13-203ENST00000428135 C20orf194Q5TEA3 1177 aa11.54□□□□□ -0.56
SNX13-203ENST00000428135 NPHP3Q7Z494 1330 aa11.54□□□□□ -0.56
SNX13-203ENST00000428135 C14orf93Q9H972 538 aaKnown RBP11.54□□□□□ -0.56
SNX13-203ENST00000428135 TANGO6Q9C0B7 1094 aa11.53□□□□□ -0.56
SNX13-203ENST00000428135 TMOD2Q9NZR1 351 aa11.53□□□□□ -0.56
SNX13-203ENST00000428135 CAVIN4Q5BKX8 364 aa11.53□□□□□ -0.56
SNX13-203ENST00000428135 BLOC1S2Q6QNY1 142 aa11.53□□□□□ -0.56
SNX13-203ENST00000428135 DZIP1Q86YF9 867 aaKnown RBP11.53□□□□□ -0.56
SNX13-203ENST00000428135 SSH1Q8WYL5 1049 aa11.53□□□□□ -0.56
SNX13-203ENST00000428135 SNRKQ9NRH2 765 aa11.53□□□□□ -0.56
SNX13-203ENST00000428135 LRRFIP2Q9Y608 721 aaKnown RBP11.53□□□□□ -0.56
SNX13-203ENST00000428135 PDRG1Q9NUG6 133 aa11.53□□□□□ -0.56
SNX13-203ENST00000428135 BTG4Q9NY30 223 aa11.53□□□□□ -0.56
SNX13-203ENST00000428135 A0A087WZG4 1122 aa11.53□□□□□ -0.56
SNX13-203ENST00000428135 DHX8Q14562 1220 aaKnown RBP11.53□□□□□ -0.56
SNX13-203ENST00000428135 TSHZ3Q63HK5 1081 aa11.53□□□□□ -0.56
SNX13-203ENST00000428135 ZSCAN25Q6NSZ9 544 aa11.53□□□□□ -0.56
SNX13-203ENST00000428135 IFIT5Q13325 482 aaKnown RBP11.53□□□□□ -0.56
SNX13-203ENST00000428135 LARP1BQ659C4 914 aaKnown RBP11.53□□□□□ -0.56
SNX13-203ENST00000428135 CASTP20810 708 aaKnown RBP11.52□□□□□ -0.56
SNX13-203ENST00000428135 IFIT1P09914 478 aaKnown RBP11.52□□□□□ -0.56
SNX13-203ENST00000428135 GUCY1B3Q02153 619 aa11.52□□□□□ -0.56
SNX13-203ENST00000428135 MKNK2Q9HBH9 465 aa11.52□□□□□ -0.56
SNX13-203ENST00000428135 MAGEC2Q9UBF1 373 aaPredicted RBP11.52□□□□□ -0.56
SNX13-203ENST00000428135 SLC39A6Q13433 755 aa11.52□□□□□ -0.57
SNX13-203ENST00000428135 CAGE1Q8TC20 777 aa11.52□□□□□ -0.57
SNX13-203ENST00000428135 MAP3K2Q9Y2U5 619 aa11.52□□□□□ -0.57
SNX13-203ENST00000428135 LARP1Q6PKG0 1096 aaKnown RBP11.52□□□□□ -0.57
SNX13-203ENST00000428135 NAT10Q9H0A0 1025 aaKnown RBP11.51□□□□□ -0.57
SNX13-203ENST00000428135 RANBP6O60518 1105 aaKnown RBP11.51□□□□□ -0.57
SNX13-203ENST00000428135 RAB11FIP4Q86YS3 637 aa11.51□□□□□ -0.57
SNX13-203ENST00000428135 IQSEC3Q9UPP2 1182 aaPredicted RBP11.51□□□□□ -0.57
SNX13-203ENST00000428135 SLFN5Q08AF3 891 aa11.51□□□□□ -0.57
SNX13-203ENST00000428135 DDB1Q16531 1140 aa11.51□□□□□ -0.57
SNX13-203ENST00000428135 ZNF396Q96N95 335 aaPredicted RBP11.51□□□□□ -0.57
SNX13-203ENST00000428135 UPF3BQ9BZI7 483 aaKnown RBP11.51□□□□□ -0.57
SNX13-203ENST00000428135 PDCL3Q9H2J4 239 aa11.51□□□□□ -0.57
SNX13-203ENST00000428135 FAM13BQ9NYF5 915 aa11.51□□□□□ -0.57
SNX13-203ENST00000428135 TRAK2O60296 914 aa11.51□□□□□ -0.57
SNX13-203ENST00000428135 RFC4P35249 363 aa11.51□□□□□ -0.57
SNX13-203ENST00000428135 RABEP1Q15276 862 aa11.51□□□□□ -0.57
SNX13-203ENST00000428135 FERMT3Q86UX7 667 aa11.51□□□□□ -0.57
SNX13-203ENST00000428135 PRPF40BQ6NWY9 871 aaKnown RBP11.5□□□□□ -0.57
SNX13-203ENST00000428135 NUP160Q12769 1436 aa11.5□□□□□ -0.57
SNX13-203ENST00000428135 CCDC144CPQ8IYA2 1237 aa11.5□□□□□ -0.57
SNX13-203ENST00000428135 CTTNBP2Q8WZ74 1663 aa11.5□□□□□ -0.57
SNX13-203ENST00000428135 F8W031 263 aaPredicted RBP11.5□□□□□ -0.57
SNX13-203ENST00000428135 NASPP49321 788 aaPredicted RBP11.5□□□□□ -0.57
SNX13-203ENST00000428135 FAM98CQ17RN3 349 aaKnown RBP11.5□□□□□ -0.57
SNX13-203ENST00000428135 AMOTQ4VCS5 1084 aa11.5□□□□□ -0.57
SNX13-203ENST00000428135 SEPT11Q9NVA2 429 aaKnown RBP11.5□□□□□ -0.57
SNX13-203ENST00000428135 IMMTQ16891 758 aaKnown RBP11.49□□□□□ -0.57
SNX13-203ENST00000428135 CCDC96Q2M329 555 aa11.49□□□□□ -0.57
SNX13-203ENST00000428135 FAM177A1Q8N128 213 aaPredicted RBP11.49□□□□□ -0.57
SNX13-203ENST00000428135 SYCP1Q15431 976 aa11.49□□□□□ -0.57
SNX13-203ENST00000428135 MNS1Q8NEH6 495 aa11.49□□□□□ -0.57
SNX13-203ENST00000428135 SERPINC1P01008 464 aa11.49□□□□□ -0.57
SNX13-203ENST00000428135 PDCP20941 246 aa11.49□□□□□ -0.57
SNX13-203ENST00000428135 DNAAF4Q8WXU2 420 aa11.49□□□□□ -0.57
SNX13-203ENST00000428135 ABCC10Q5T3U5 1492 aa11.48□□□□□ -0.57
SNX13-203ENST00000428135 CCDC83Q8IWF9 413 aa11.48□□□□□ -0.57
SNX13-203ENST00000428135 AAMPQ13685 434 aa11.48□□□□□ -0.57
SNX13-203ENST00000428135 UBE3BQ7Z3V4 1068 aa11.48□□□□□ -0.57
SNX13-203ENST00000428135 FANCIQ9NVI1 1328 aa11.48□□□□□ -0.57
SNX13-203ENST00000428135 ANKRD18BA2A2Z9 1011 aa11.48□□□□□ -0.57
SNX13-203ENST00000428135 NAPBQ9H115 298 aa11.48□□□□□ -0.57
SNX13-203ENST00000428135 VAT1LQ9HCJ6 419 aa11.48□□□□□ -0.57
SNX13-203ENST00000428135 DISP1Q96F81 1524 aa11.48□□□□□ -0.57
SNX13-203ENST00000428135 ATP6V1AP38606 617 aa11.48□□□□□ -0.57
SNX13-203ENST00000428135 PTPRKQ15262 1439 aa11.48□□□□□ -0.57
SNX13-203ENST00000428135 YEATS2Q9ULM3 1422 aa11.47□□□□□ -0.57
SNX13-203ENST00000428135 KIF1BPQ96EK5 621 aa11.47□□□□□ -0.57
SNX13-203ENST00000428135 UGGT2Q9NYU1 1516 aa11.47□□□□□ -0.57
SNX13-203ENST00000428135 MX1P20591 662 aa11.47□□□□□ -0.57
SNX13-203ENST00000428135 TFCP2L1Q9NZI6 479 aa11.47□□□□□ -0.57
SNX13-203ENST00000428135 IFNL2Q8IZJ0 200 aa11.47□□□□□ -0.57
SNX13-203ENST00000428135 LIG1P18858 919 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms