RNA–Protein interactions for RNA: ENST00000428104.2

PDE6D-203, Transcript of phosphodiesterase 6D, humanhuman

TSL 3

Gene PDE6D, Length 627 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-203ENST00000428104 RRS1Q15050 365 aaKnown RBP20.47■□□□□ 0.87
PDE6D-203ENST00000428104 RTL1A6NKG5 1358 aa20.46■□□□□ 0.87
PDE6D-203ENST00000428104 KCNA3P22001 575 aa20.45■□□□□ 0.86
PDE6D-203ENST00000428104 CCDC87Q9NVE4 849 aa20.45■□□□□ 0.86
PDE6D-203ENST00000428104 TMF1P82094 1093 aa20.44■□□□□ 0.86
PDE6D-203ENST00000428104 PKD1L3Q7Z443 1732 aa20.44■□□□□ 0.86
PDE6D-203ENST00000428104 NLGN1Q8N2Q7 840 aa20.43■□□□□ 0.86
PDE6D-203ENST00000428104 DCAF5Q96JK2 942 aa20.43■□□□□ 0.86
PDE6D-203ENST00000428104 MAP2P11137 1827 aaKnown RBP20.43■□□□□ 0.86
PDE6D-203ENST00000428104 SMG6Q86US8 1419 aaKnown RBP20.43■□□□□ 0.86
PDE6D-203ENST00000428104 ATP6V1AP38606 617 aa20.42■□□□□ 0.86
PDE6D-203ENST00000428104 ASAP1Q9ULH1 1129 aa20.42■□□□□ 0.86
PDE6D-203ENST00000428104 PIM2Q9P1W9 311 aa20.41■□□□□ 0.86
PDE6D-203ENST00000428104 ITGB4P16144 1822 aa20.4■□□□□ 0.86
PDE6D-203ENST00000428104 DALRD3Q5D0E6 543 aaKnown RBP20.4■□□□□ 0.86
PDE6D-203ENST00000428104 TRAPPC3LQ5T215 181 aa20.4■□□□□ 0.86
PDE6D-203ENST00000428104 TNRC6CQ9HCJ0 1690 aaKnown RBP20.4■□□□□ 0.86
PDE6D-203ENST00000428104 RTCBQ9Y3I0 505 aaKnown RBP20.39■□□□□ 0.85
PDE6D-203ENST00000428104 PARP3Q9Y6F1 533 aa20.39■□□□□ 0.85
PDE6D-203ENST00000428104 GYS1P13807 737 aa20.38■□□□□ 0.85
PDE6D-203ENST00000428104 HSP90AB2PQ58FF8 381 aa20.38■□□□□ 0.85
PDE6D-203ENST00000428104 TMOD3Q9NYL9 352 aa20.38■□□□□ 0.85
PDE6D-203ENST00000428104 BRCA1P38398 1863 aaKnown RBP20.38■□□□□ 0.85
PDE6D-203ENST00000428104 C4AP0C0L4 1744 aa20.38■□□□□ 0.85
PDE6D-203ENST00000428104 NKX1-1Q15270 411 aaPredicted RBP20.37■□□□□ 0.85
PDE6D-203ENST00000428104 ARHGEF1Q92888 912 aaKnown RBP20.37■□□□□ 0.85
PDE6D-203ENST00000428104 ARFGEF1Q9Y6D6 1849 aa20.35■□□□□ 0.85
PDE6D-203ENST00000428104 VEGFAP15692 232 aaPredicted RBP20.35■□□□□ 0.85
PDE6D-203ENST00000428104 INSRP06213 1382 aa20.34■□□□□ 0.85
PDE6D-203ENST00000428104 CHRNA5P30532 468 aa20.34■□□□□ 0.85
PDE6D-203ENST00000428104 RASSF7Q02833 373 aa20.34■□□□□ 0.85
PDE6D-203ENST00000428104 ATG3Q9NT62 314 aa20.34■□□□□ 0.85
PDE6D-203ENST00000428104 RFC4P35249 363 aa20.33■□□□□ 0.85
PDE6D-203ENST00000428104 SIN3AQ96ST3 1273 aa20.33■□□□□ 0.85
PDE6D-203ENST00000428104 FOXN1O15353 648 aa20.32■□□□□ 0.84
PDE6D-203ENST00000428104 ADRA2BP18089 450 aa20.32■□□□□ 0.84
PDE6D-203ENST00000428104 SLC4A9Q96Q91 983 aa20.32■□□□□ 0.84
PDE6D-203ENST00000428104 CARD11Q9BXL7 1154 aa20.32■□□□□ 0.84
PDE6D-203ENST00000428104 GGNBP2Q9H3C7 697 aa20.32■□□□□ 0.84
PDE6D-203ENST00000428104 KDRP35968 1356 aa20.32■□□□□ 0.84
PDE6D-203ENST00000428104 GLTPD2A6NH11 291 aa20.31■□□□□ 0.84
PDE6D-203ENST00000428104 MKRN1Q9UHC7 482 aaKnown RBP20.31■□□□□ 0.84
PDE6D-203ENST00000428104 SPG7Q9UQ90 795 aa20.31■□□□□ 0.84
PDE6D-203ENST00000428104 ZC3H4Q9UPT8 1303 aaKnown RBP20.3■□□□□ 0.84
PDE6D-203ENST00000428104 PUS7Q96PZ0 661 aaKnown RBP20.3■□□□□ 0.84
PDE6D-203ENST00000428104 FLT4P35916 1363 aa20.3■□□□□ 0.84
PDE6D-203ENST00000428104 FYB1O15117 783 aa20.29■□□□□ 0.84
PDE6D-203ENST00000428104 DDR1Q08345 913 aa20.29■□□□□ 0.84
PDE6D-203ENST00000428104 KDM6AO15550 1401 aaPredicted RBP20.28■□□□□ 0.84
PDE6D-203ENST00000428104 RPS6KA4O75676 772 aa20.28■□□□□ 0.84
PDE6D-203ENST00000428104 FAM161AQ3B820 660 aa20.28■□□□□ 0.84
PDE6D-203ENST00000428104 RC3H1Q5TC82 1133 aaKnown RBP20.28■□□□□ 0.84
PDE6D-203ENST00000428104 RBM42Q9BTD8 480 aaKnown RBP20.28■□□□□ 0.84
PDE6D-203ENST00000428104 PRDM10Q9NQV6 1147 aa20.28■□□□□ 0.84
PDE6D-203ENST00000428104 LMNB1P20700 586 aa20.27■□□□□ 0.84
PDE6D-203ENST00000428104 NEUROD1Q13562 356 aa20.27■□□□□ 0.84
PDE6D-203ENST00000428104 FKBP8Q14318 412 aa20.27■□□□□ 0.84
PDE6D-203ENST00000428104 SRP68Q9UHB9 627 aaKnown RBP20.27■□□□□ 0.84
PDE6D-203ENST00000428104 CNTNAP4Q9C0A0 1308 aa20.27■□□□□ 0.83
PDE6D-203ENST00000428104 SBF1O95248 1867 aa20.26■□□□□ 0.83
PDE6D-203ENST00000428104 POTECB2RU33 542 aa20.25■□□□□ 0.83
PDE6D-203ENST00000428104 PHKG2P15735 406 aa20.25■□□□□ 0.83
PDE6D-203ENST00000428104 CREBZFQ9NS37 354 aa20.25■□□□□ 0.83
PDE6D-203ENST00000428104 PCDH10Q9P2E7 1040 aa20.25■□□□□ 0.83
PDE6D-203ENST00000428104 NCAPD2Q15021 1401 aa20.25■□□□□ 0.83
PDE6D-203ENST00000428104 IFNL2Q8IZJ0 200 aa20.23■□□□□ 0.83
PDE6D-203ENST00000428104 EMILIN1Q9Y6C2 1016 aa20.23■□□□□ 0.83
PDE6D-203ENST00000428104 KIF24Q5T7B8 1368 aa20.22■□□□□ 0.83
PDE6D-203ENST00000428104 CTCFP49711 727 aaPredicted RBP20.22■□□□□ 0.83
PDE6D-203ENST00000428104 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.22■□□□□ 0.83
PDE6D-203ENST00000428104 USP42Q9H9J4 1324 aaKnown RBP20.21■□□□□ 0.83
PDE6D-203ENST00000428104 CNTNAP1P78357 1384 aa20.21■□□□□ 0.83
PDE6D-203ENST00000428104 POLRMTO00411 1230 aaKnown RBP20.2■□□□□ 0.82
PDE6D-203ENST00000428104 AIDAQ96BJ3 306 aa20.2■□□□□ 0.82
PDE6D-203ENST00000428104 TESK2Q96S53 571 aa20.2■□□□□ 0.82
PDE6D-203ENST00000428104 ABHD8Q96I13 439 aa20.19■□□□□ 0.82
PDE6D-203ENST00000428104 TONSLQ96HA7 1378 aa20.19■□□□□ 0.82
PDE6D-203ENST00000428104 COL5A3P25940 1745 aaPredicted RBP20.19■□□□□ 0.82
PDE6D-203ENST00000428104 NFKBIEO00221 500 aa20.18■□□□□ 0.82
PDE6D-203ENST00000428104 POTEIP0CG38 1075 aa20.18■□□□□ 0.82
PDE6D-203ENST00000428104 POTEJP0CG39 1038 aa20.18■□□□□ 0.82
PDE6D-203ENST00000428104 LBX1P52954 281 aa20.18■□□□□ 0.82
PDE6D-203ENST00000428104 CHADLQ6NUI6 762 aa20.18■□□□□ 0.82
PDE6D-203ENST00000428104 EYA1Q99502 592 aa20.18■□□□□ 0.82
PDE6D-203ENST00000428104 PPM1GO15355 546 aaPredicted RBP20.17■□□□□ 0.82
PDE6D-203ENST00000428104 CRKLP46109 303 aaKnown RBP20.17■□□□□ 0.82
PDE6D-203ENST00000428104 TIAM2Q8IVF5 1701 aa20.16■□□□□ 0.82
PDE6D-203ENST00000428104 TM4SF1P30408 202 aa20.16■□□□□ 0.82
PDE6D-203ENST00000428104 ZNF831Q5JPB2 1677 aa20.16■□□□□ 0.82
PDE6D-203ENST00000428104 PTCD1O75127 700 aaKnown RBP20.15■□□□□ 0.82
PDE6D-203ENST00000428104 VEGFBP49765 207 aa20.15■□□□□ 0.82
PDE6D-203ENST00000428104 DPY19L2Q6NUT2 758 aa20.15■□□□□ 0.82
PDE6D-203ENST00000428104 MYH14Q7Z406 1995 aaKnown RBP20.15■□□□□ 0.82
PDE6D-203ENST00000428104 ST20-MTHFSA0A0A6YYL1 179 aa20.14■□□□□ 0.81
PDE6D-203ENST00000428104 ERVV-2B6SEH9 535 aa20.14■□□□□ 0.81
PDE6D-203ENST00000428104 TTLL6Q8N841 843 aa20.13■□□□□ 0.81
PDE6D-203ENST00000428104 WBP1LQ9NX94 342 aa20.13■□□□□ 0.81
PDE6D-203ENST00000428104 MLLT1Q03111 559 aaPredicted RBP20.12■□□□□ 0.81
PDE6D-203ENST00000428104 HSPA8P11142 646 aaKnown RBP20.1■□□□□ 0.81
PDE6D-203ENST00000428104 USPL1Q5W0Q7 1092 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms