RNA–Protein interactions for RNA: ENST00000428101.6

LMO1-202, Transcript of LIM domain only 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LMO1, Length 1,038 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1-202ENST00000428101 KDM6AO15550 1401 aaPredicted RBP37.04■■■■□ 3.52
LMO1-202ENST00000428101 MSL1Q68DK7 614 aa37.04■■■■□ 3.52
LMO1-202ENST00000428101 ITPK1Q13572 414 aa37.03■■■■□ 3.52
LMO1-202ENST00000428101 SMIM5Q71RC9 77 aa37.02■■■■□ 3.52
LMO1-202ENST00000428101 KLHL34Q8N239 644 aa37.02■■■■□ 3.52
LMO1-202ENST00000428101 ATP6V1AP38606 617 aa37.01■■■■□ 3.52
LMO1-202ENST00000428101 NPC1L1Q9UHC9 1359 aa36.97■■■■□ 3.51
LMO1-202ENST00000428101 PHF14O94880 888 aa36.97■■■■□ 3.51
LMO1-202ENST00000428101 C1orf141Q5JVX7 400 aa36.97■■■■□ 3.51
LMO1-202ENST00000428101 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP36.96■■■■□ 3.51
LMO1-202ENST00000428101 NLGN2Q8NFZ4 835 aa36.96■■■■□ 3.51
LMO1-202ENST00000428101 SLC4A9Q96Q91 983 aa36.96■■■■□ 3.51
LMO1-202ENST00000428101 GOLGB1Q14789 3259 aaKnown RBP36.95■■■■□ 3.51
LMO1-202ENST00000428101 CABP4P57796 275 aa36.95■■■■□ 3.51
LMO1-202ENST00000428101 SSFA2P28290 1259 aa36.94■■■■□ 3.5
LMO1-202ENST00000428101 ZNF831Q5JPB2 1677 aa36.93■■■■□ 3.5
LMO1-202ENST00000428101 CHD4Q14839 1912 aa36.92■■■■□ 3.5
LMO1-202ENST00000428101 GNPATO15228 680 aa36.91■■■■□ 3.5
LMO1-202ENST00000428101 HMOX1P09601 288 aa36.9■■■■□ 3.5
LMO1-202ENST00000428101 RBM42Q9BTD8 480 aaKnown RBP36.9■■■■□ 3.5
LMO1-202ENST00000428101 SCN11AQ9UI33 1791 aa36.9■■■■□ 3.5
LMO1-202ENST00000428101 DIAPH1O60610 1272 aaKnown RBP36.89■■■■□ 3.5
LMO1-202ENST00000428101 CNGB1Q14028 1251 aaPredicted RBP36.89■■■■□ 3.5
LMO1-202ENST00000428101 GPR162Q16538 588 aa36.89■■■■□ 3.5
LMO1-202ENST00000428101 NFATC2IPQ8NCF5 419 aa36.89■■■■□ 3.5
LMO1-202ENST00000428101 AKAP4Q5JQC9 854 aa36.87■■■■□ 3.49
LMO1-202ENST00000428101 COL5A3P25940 1745 aaPredicted RBP36.86■■■■□ 3.49
LMO1-202ENST00000428101 COL3A1P02461 1466 aaPredicted RBP36.84■■■■□ 3.49
LMO1-202ENST00000428101 RC3H1Q5TC82 1133 aaKnown RBP36.82■■■■□ 3.48
LMO1-202ENST00000428101 CD2APQ9Y5K6 639 aa36.82■■■■□ 3.48
LMO1-202ENST00000428101 MYH14Q7Z406 1995 aaKnown RBP36.82■■■■□ 3.48
LMO1-202ENST00000428101 VIRMAQ69YN4 1812 aaKnown RBP36.81■■■■□ 3.48
LMO1-202ENST00000428101 PELP1Q8IZL8 1130 aaKnown RBP36.81■■■■□ 3.48
LMO1-202ENST00000428101 LGR6Q9HBX8 967 aa36.81■■■■□ 3.48
LMO1-202ENST00000428101 PTCD1O75127 700 aaKnown RBP36.8■■■■□ 3.48
LMO1-202ENST00000428101 CNTNAP4Q9C0A0 1308 aa36.8■■■■□ 3.48
LMO1-202ENST00000428101 MTHFSDQ2M296 383 aaKnown RBP36.79■■■■□ 3.48
LMO1-202ENST00000428101 RTCBQ9Y3I0 505 aaKnown RBP36.79■■■■□ 3.48
LMO1-202ENST00000428101 TRAPPC3LQ5T215 181 aa36.77■■■■□ 3.48
LMO1-202ENST00000428101 SLC52A2Q9HAB3 445 aa36.77■■■■□ 3.48
LMO1-202ENST00000428101 RNMTO43148 476 aaKnown RBP36.76■■■■□ 3.48
LMO1-202ENST00000428101 YBX3P16989 372 aaKnown RBP eCLIP36.76■■■■□ 3.48
LMO1-202ENST00000428101 ZNF784Q8NCA9 323 aaPredicted RBP36.75■■■■□ 3.47
LMO1-202ENST00000428101 RPS6KA4O75676 772 aa36.74■■■■□ 3.47
LMO1-202ENST00000428101 ARHGEF1Q92888 912 aaKnown RBP36.74■■■■□ 3.47
LMO1-202ENST00000428101 MRC1P22897 1456 aa36.74■■■■□ 3.47
LMO1-202ENST00000428101 ADAMTS7Q9UKP4 1686 aa36.74■■■■□ 3.47
LMO1-202ENST00000428101 TJP1Q07157 1748 aa36.73■■■■□ 3.47
LMO1-202ENST00000428101 ADRA2BP18089 450 aa36.72■■■■□ 3.47
LMO1-202ENST00000428101 CICQ96RK0 1608 aaPredicted RBP36.72■■■■□ 3.47
LMO1-202ENST00000428101 U2SURPO15042 1029 aaKnown RBP36.71■■■■□ 3.47
LMO1-202ENST00000428101 CRKLP46109 303 aaKnown RBP36.69■■■■□ 3.46
LMO1-202ENST00000428101 MMP10P09238 476 aa36.68■■■■□ 3.46
LMO1-202ENST00000428101 C4AP0C0L4 1744 aa36.67■■■■□ 3.46
LMO1-202ENST00000428101 GRIN3BO60391 1043 aa36.66■■■■□ 3.46
LMO1-202ENST00000428101 SLC39A6Q13433 755 aa36.66■■■■□ 3.46
LMO1-202ENST00000428101 RFC4P35249 363 aa36.65■■■■□ 3.46
LMO1-202ENST00000428101 NLGN1Q8N2Q7 840 aa36.65■■■■□ 3.46
LMO1-202ENST00000428101 GYS1P13807 737 aa36.64■■■■□ 3.46
LMO1-202ENST00000428101 INTS5Q6P9B9 1019 aaKnown RBP36.63■■■■□ 3.45
LMO1-202ENST00000428101 DNAJC10Q8IXB1 793 aa36.62■■■■□ 3.45
LMO1-202ENST00000428101 KCPQ6ZWJ8 1503 aa36.61■■■■□ 3.45
LMO1-202ENST00000428101 PPP2R1AP30153 589 aa36.61■■■■□ 3.45
LMO1-202ENST00000428101 CFAP53Q96M91 514 aa36.61■■■■□ 3.45
LMO1-202ENST00000428101 KIF13BQ9NQT8 1826 aa36.59■■■■□ 3.45
LMO1-202ENST00000428101 GAS2L2Q8NHY3 880 aa36.59■■■■□ 3.45
LMO1-202ENST00000428101 IL17REQ8NFR9 667 aa36.57■■■■□ 3.44
LMO1-202ENST00000428101 GNAT3A8MTJ3 354 aa36.56■■■■□ 3.44
LMO1-202ENST00000428101 PHACTR3Q96KR7 559 aa36.56■■■■□ 3.44
LMO1-202ENST00000428101 RSPH6AQ9H0K4 717 aa36.56■■■■□ 3.44
LMO1-202ENST00000428101 SRP68Q9UHB9 627 aaKnown RBP36.56■■■■□ 3.44
LMO1-202ENST00000428101 UBR2Q8IWV8 1755 aa36.55■■■■□ 3.44
LMO1-202ENST00000428101 CYP19A1P11511 503 aaPredicted RBP36.55■■■■□ 3.44
LMO1-202ENST00000428101 CCDC87Q9NVE4 849 aa36.55■■■■□ 3.44
LMO1-202ENST00000428101 PRKAR2BP31323 418 aa36.54■■■■□ 3.44
LMO1-202ENST00000428101 WWC3Q9ULE0 1092 aa36.54■■■■□ 3.44
LMO1-202ENST00000428101 USP42Q9H9J4 1324 aaKnown RBP36.54■■■■□ 3.44
LMO1-202ENST00000428101 KIAA1551Q9HCM1 1747 aa36.53■■■■□ 3.44
LMO1-202ENST00000428101 VSIG10Q8N0Z9 540 aa36.52■■■■□ 3.44
LMO1-202ENST00000428101 NUDCQ9Y266 331 aa36.52■■■■□ 3.44
LMO1-202ENST00000428101 SIPA1L3O60292 1781 aaPredicted RBP36.52■■■■□ 3.44
LMO1-202ENST00000428101 C10orf71Q711Q0 1435 aa36.51■■■■□ 3.44
LMO1-202ENST00000428101 FKBP8Q14318 412 aa36.51■■■■□ 3.44
LMO1-202ENST00000428101 SOS1Q07889 1333 aaPredicted RBP36.51■■■■□ 3.43
LMO1-202ENST00000428101 PXDNLA1KZ92 1463 aa36.5■■■■□ 3.43
LMO1-202ENST00000428101 PARP3Q9Y6F1 533 aa36.5■■■■□ 3.43
LMO1-202ENST00000428101 N4BP2Q86UW6 1770 aaPredicted RBP36.5■■■■□ 3.43
LMO1-202ENST00000428101 TGFB2P61812 414 aa36.48■■■■□ 3.43
LMO1-202ENST00000428101 TEFQ10587 303 aa36.48■■■■□ 3.43
LMO1-202ENST00000428101 U2AF1L5P0DN76 240 aaPredicted RBP36.47■■■■□ 3.43
LMO1-202ENST00000428101 U2AF1Q01081 240 aaKnown RBP eCLIP36.47■■■■□ 3.43
LMO1-202ENST00000428101 ZBTB1Q9Y2K1 713 aa36.47■■■■□ 3.43
LMO1-202ENST00000428101 CEMIPQ8WUJ3 1361 aa36.47■■■■□ 3.43
LMO1-202ENST00000428101 TTC5Q8N0Z6 440 aa36.46■■■■□ 3.43
LMO1-202ENST00000428101 DDR1Q08345 913 aa36.44■■■■□ 3.42
LMO1-202ENST00000428101 ZNF790Q6PG37 636 aa36.44■■■■□ 3.42
LMO1-202ENST00000428101 ZNF496Q96IT1 587 aaPredicted RBP36.44■■■■□ 3.42
LMO1-202ENST00000428101 A0A0G2JLW4 131 aa36.43■■■■□ 3.42
LMO1-202ENST00000428101 FCHSD2O94868 740 aa36.43■■■■□ 3.42
LMO1-202ENST00000428101 USPL1Q5W0Q7 1092 aa36.43■■■■□ 3.42
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms