RNA–Protein interactions for RNA: ENST00000428098.5

DDX39B-208, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-208ENST00000428098 PCDH11YQ9BZA8 1340 aa17.02■□□□□ 0.32
DDX39B-208ENST00000428098 ASAP1Q9ULH1 1129 aa17.02■□□□□ 0.32
DDX39B-208ENST00000428098 A0A1W2PP64 1363 aa17.02■□□□□ 0.31
DDX39B-208ENST00000428098 ITGB4P16144 1822 aa17■□□□□ 0.31
DDX39B-208ENST00000428098 BRCA1P38398 1863 aaKnown RBP17■□□□□ 0.31
DDX39B-208ENST00000428098 ATP6V1AP38606 617 aa17■□□□□ 0.31
DDX39B-208ENST00000428098 RRS1Q15050 365 aaKnown RBP17■□□□□ 0.31
DDX39B-208ENST00000428098 TRAPPC3LQ5T215 181 aa17■□□□□ 0.31
DDX39B-208ENST00000428098 CCDC87Q9NVE4 849 aa17■□□□□ 0.31
DDX39B-208ENST00000428098 TERF2IPQ9NYB0 399 aa17■□□□□ 0.31
DDX39B-208ENST00000428098 PIM2Q9P1W9 311 aa17■□□□□ 0.31
DDX39B-208ENST00000428098 GYS1P13807 737 aa16.99■□□□□ 0.31
DDX39B-208ENST00000428098 ARHGEF1Q92888 912 aaKnown RBP16.99■□□□□ 0.31
DDX39B-208ENST00000428098 COG3Q96JB2 828 aa16.99■□□□□ 0.31
DDX39B-208ENST00000428098 PCDH10Q9P2E7 1040 aa16.99■□□□□ 0.31
DDX39B-208ENST00000428098 PKD1L3Q7Z443 1732 aa16.99■□□□□ 0.31
DDX39B-208ENST00000428098 FOXN1O15353 648 aa16.98■□□□□ 0.31
DDX39B-208ENST00000428098 VEGFAP15692 232 aaPredicted RBP16.98■□□□□ 0.31
DDX39B-208ENST00000428098 NKX1-1Q15270 411 aaPredicted RBP16.98■□□□□ 0.31
DDX39B-208ENST00000428098 DALRD3Q5D0E6 543 aaKnown RBP16.98■□□□□ 0.31
DDX39B-208ENST00000428098 POTECB2RU33 542 aa16.97■□□□□ 0.31
DDX39B-208ENST00000428098 HSP90AB2PQ58FF8 381 aa16.97■□□□□ 0.31
DDX39B-208ENST00000428098 ARFGEF1Q9Y6D6 1849 aa16.97■□□□□ 0.31
DDX39B-208ENST00000428098 ROCK2O75116 1388 aaKnown RBP16.97■□□□□ 0.31
DDX39B-208ENST00000428098 SBF1O95248 1867 aa16.97■□□□□ 0.31
DDX39B-208ENST00000428098 SLC4A9Q96Q91 983 aa16.96■□□□□ 0.31
DDX39B-208ENST00000428098 PARP3Q9Y6F1 533 aa16.96■□□□□ 0.31
DDX39B-208ENST00000428098 TNRC6CQ9HCJ0 1690 aaKnown RBP16.95■□□□□ 0.3
DDX39B-208ENST00000428098 GLTPD2A6NH11 291 aa16.95■□□□□ 0.3
DDX39B-208ENST00000428098 CHRNA5P30532 468 aa16.95■□□□□ 0.3
DDX39B-208ENST00000428098 ATG3Q9NT62 314 aa16.95■□□□□ 0.3
DDX39B-208ENST00000428098 MKRN1Q9UHC7 482 aaKnown RBP16.95■□□□□ 0.3
DDX39B-208ENST00000428098 RTCBQ9Y3I0 505 aaKnown RBP16.95■□□□□ 0.3
DDX39B-208ENST00000428098 C4AP0C0L4 1744 aa16.94■□□□□ 0.3
DDX39B-208ENST00000428098 FAM161AQ3B820 660 aa16.94■□□□□ 0.3
DDX39B-208ENST00000428098 PRDM10Q9NQV6 1147 aa16.94■□□□□ 0.3
DDX39B-208ENST00000428098 RASSF7Q02833 373 aa16.93■□□□□ 0.3
DDX39B-208ENST00000428098 TMOD3Q9NYL9 352 aa16.92■□□□□ 0.3
DDX39B-208ENST00000428098 RTL1A6NKG5 1358 aa16.91■□□□□ 0.3
DDX39B-208ENST00000428098 DDR1Q08345 913 aa16.91■□□□□ 0.3
DDX39B-208ENST00000428098 RPS6KA4O75676 772 aa16.9■□□□□ 0.3
DDX39B-208ENST00000428098 RFC4P35249 363 aa16.9■□□□□ 0.3
DDX39B-208ENST00000428098 RC3H1Q5TC82 1133 aaKnown RBP16.9■□□□□ 0.3
DDX39B-208ENST00000428098 KDM6AO15550 1401 aaPredicted RBP16.89■□□□□ 0.29
DDX39B-208ENST00000428098 FYB1O15117 783 aa16.89■□□□□ 0.29
DDX39B-208ENST00000428098 ADRA2BP18089 450 aa16.89■□□□□ 0.29
DDX39B-208ENST00000428098 FKBP8Q14318 412 aa16.89■□□□□ 0.29
DDX39B-208ENST00000428098 SIN3AQ96ST3 1273 aa16.89■□□□□ 0.29
DDX39B-208ENST00000428098 GGNBP2Q9H3C7 697 aa16.89■□□□□ 0.29
DDX39B-208ENST00000428098 CREBZFQ9NS37 354 aa16.89■□□□□ 0.29
DDX39B-208ENST00000428098 SRP68Q9UHB9 627 aaKnown RBP16.89■□□□□ 0.29
DDX39B-208ENST00000428098 INSRP06213 1382 aa16.89■□□□□ 0.29
DDX39B-208ENST00000428098 PUS7Q96PZ0 661 aaKnown RBP16.88■□□□□ 0.29
DDX39B-208ENST00000428098 ZC3H4Q9UPT8 1303 aaKnown RBP16.88■□□□□ 0.29
DDX39B-208ENST00000428098 LMNB1P20700 586 aa16.87■□□□□ 0.29
DDX39B-208ENST00000428098 ABHD8Q96I13 439 aa16.87■□□□□ 0.29
DDX39B-208ENST00000428098 KDRP35968 1356 aa16.87■□□□□ 0.29
DDX39B-208ENST00000428098 SMG6Q86US8 1419 aaKnown RBP16.87■□□□□ 0.29
DDX39B-208ENST00000428098 CTCFP49711 727 aaPredicted RBP16.86■□□□□ 0.29
DDX39B-208ENST00000428098 LBX1P52954 281 aa16.86■□□□□ 0.29
DDX39B-208ENST00000428098 RBM42Q9BTD8 480 aaKnown RBP16.86■□□□□ 0.29
DDX39B-208ENST00000428098 SPG7Q9UQ90 795 aa16.86■□□□□ 0.29
DDX39B-208ENST00000428098 POTEIP0CG38 1075 aa16.85■□□□□ 0.29
DDX39B-208ENST00000428098 POTEJP0CG39 1038 aa16.85■□□□□ 0.29
DDX39B-208ENST00000428098 CNTNAP4Q9C0A0 1308 aa16.85■□□□□ 0.29
DDX39B-208ENST00000428098 PHKG2P15735 406 aa16.84■□□□□ 0.29
DDX39B-208ENST00000428098 TM4SF1P30408 202 aa16.84■□□□□ 0.29
DDX39B-208ENST00000428098 WBP1LQ9NX94 342 aa16.84■□□□□ 0.29
DDX39B-208ENST00000428098 MYH14Q7Z406 1995 aaKnown RBP16.84■□□□□ 0.29
DDX39B-208ENST00000428098 POLRMTO00411 1230 aaKnown RBP16.83■□□□□ 0.28
DDX39B-208ENST00000428098 VEGFBP49765 207 aa16.83■□□□□ 0.28
DDX39B-208ENST00000428098 CNTNAP1P78357 1384 aa16.83■□□□□ 0.28
DDX39B-208ENST00000428098 CHADLQ6NUI6 762 aa16.83■□□□□ 0.28
DDX39B-208ENST00000428098 CARD11Q9BXL7 1154 aa16.83■□□□□ 0.28
DDX39B-208ENST00000428098 NFKBIEO00221 500 aa16.82■□□□□ 0.28
DDX39B-208ENST00000428098 RGS19P49795 217 aa16.82■□□□□ 0.28
DDX39B-208ENST00000428098 IFNL2Q8IZJ0 200 aa16.82■□□□□ 0.28
DDX39B-208ENST00000428098 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.82■□□□□ 0.289e-20■□□□□ 9.5
DDX39B-208ENST00000428098 FLT4P35916 1363 aa16.81■□□□□ 0.28
DDX39B-208ENST00000428098 MLLT1Q03111 559 aaPredicted RBP16.81■□□□□ 0.28
DDX39B-208ENST00000428098 NEUROD1Q13562 356 aa16.81■□□□□ 0.28
DDX39B-208ENST00000428098 NCAPD2Q15021 1401 aa16.8■□□□□ 0.28
DDX39B-208ENST00000428098 AIDAQ96BJ3 306 aa16.8■□□□□ 0.28
DDX39B-208ENST00000428098 EYA1Q99502 592 aa16.8■□□□□ 0.28
DDX39B-208ENST00000428098 EMILIN1Q9Y6C2 1016 aa16.8■□□□□ 0.28
DDX39B-208ENST00000428098 USP42Q9H9J4 1324 aaKnown RBP16.79■□□□□ 0.28
DDX39B-208ENST00000428098 HSPA8P11142 646 aaKnown RBP16.79■□□□□ 0.28
DDX39B-208ENST00000428098 DPY19L2Q6NUT2 758 aa16.79■□□□□ 0.28
DDX39B-208ENST00000428098 TESK2Q96S53 571 aa16.79■□□□□ 0.28
DDX39B-208ENST00000428098 CCDC88AQ3V6T2 1871 aa16.79■□□□□ 0.28
DDX39B-208ENST00000428098 PASKQ96RG2 1323 aa16.78■□□□□ 0.28
DDX39B-208ENST00000428098 CRKLP46109 303 aaKnown RBP16.78■□□□□ 0.28
DDX39B-208ENST00000428098 TONSLQ96HA7 1378 aa16.77■□□□□ 0.28
DDX39B-208ENST00000428098 COL5A3P25940 1745 aaPredicted RBP16.77■□□□□ 0.28
DDX39B-208ENST00000428098 TTLL6Q8N841 843 aa16.77■□□□□ 0.28
DDX39B-208ENST00000428098 CCDC85CA6NKD9 419 aa16.76■□□□□ 0.27
DDX39B-208ENST00000428098 ERVV-2B6SEH9 535 aa16.76■□□□□ 0.27
DDX39B-208ENST00000428098 KIF24Q5T7B8 1368 aa16.76■□□□□ 0.27
DDX39B-208ENST00000428098 ZNF831Q5JPB2 1677 aa16.75■□□□□ 0.27
DDX39B-208ENST00000428098 PTCD1O75127 700 aaKnown RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms