RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 CAVIN2O95810 425 aa6.72□□□□□ -1.33
VTI1BP4-201ENST00000427516 CCDC172P0C7W6 258 aa6.72□□□□□ -1.33
VTI1BP4-201ENST00000427516 CASQ1P31415 396 aa6.72□□□□□ -1.33
VTI1BP4-201ENST00000427516 CYP2C19P33261 490 aa6.72□□□□□ -1.33
VTI1BP4-201ENST00000427516 PRIM1P49642 420 aaKnown RBP6.72□□□□□ -1.33
VTI1BP4-201ENST00000427516 SETQ01105 290 aaPredicted RBP6.72□□□□□ -1.33
VTI1BP4-201ENST00000427516 ZRSR1Q15695 479 aaKnown RBP6.72□□□□□ -1.33
VTI1BP4-201ENST00000427516 GRIPAP1Q4V328 841 aa6.72□□□□□ -1.33
VTI1BP4-201ENST00000427516 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.72□□□□□ -1.33
VTI1BP4-201ENST00000427516 GCC1Q96CN9 775 aa6.72□□□□□ -1.33
VTI1BP4-201ENST00000427516 ERO1AQ96HE7 468 aa6.72□□□□□ -1.33
VTI1BP4-201ENST00000427516 LMBRD1Q9NUN5 540 aa6.72□□□□□ -1.33
VTI1BP4-201ENST00000427516 FEZ2Q9UHY8 353 aaPredicted RBP6.72□□□□□ -1.33
VTI1BP4-201ENST00000427516 ELP1O95163 1332 aa6.72□□□□□ -1.33
VTI1BP4-201ENST00000427516 TRPM1Q7Z4N2 1603 aa6.72□□□□□ -1.33
VTI1BP4-201ENST00000427516 ERBINQ96RT1 1412 aa6.71□□□□□ -1.34
VTI1BP4-201ENST00000427516 ST20-MTHFSA0A0A6YYL1 179 aa6.71□□□□□ -1.34
VTI1BP4-201ENST00000427516 IPO8O15397 1037 aaKnown RBP6.71□□□□□ -1.34
VTI1BP4-201ENST00000427516 PER1O15534 1290 aaPredicted RBP6.71□□□□□ -1.34
VTI1BP4-201ENST00000427516 CCP110O43303 1012 aa6.71□□□□□ -1.34
VTI1BP4-201ENST00000427516 CDC45O75419 566 aa6.71□□□□□ -1.34
VTI1BP4-201ENST00000427516 BRPF1P55201 1214 aaPredicted RBP6.71□□□□□ -1.34
VTI1BP4-201ENST00000427516 SATB1Q01826 763 aa6.71□□□□□ -1.34
VTI1BP4-201ENST00000427516 MVPQ14764 893 aaKnown RBP6.71□□□□□ -1.34
VTI1BP4-201ENST00000427516 CCDC183Q5T5S1 534 aa6.71□□□□□ -1.34
VTI1BP4-201ENST00000427516 ZKSCAN2Q63HK3 967 aa6.71□□□□□ -1.34
VTI1BP4-201ENST00000427516 SKAP1Q86WV1 359 aa6.71□□□□□ -1.34
VTI1BP4-201ENST00000427516 WDR63Q8IWG1 891 aa6.71□□□□□ -1.34
VTI1BP4-201ENST00000427516 KIAA1524Q8TCG1 905 aa6.71□□□□□ -1.34
VTI1BP4-201ENST00000427516 PPM1EQ8WY54 764 aa6.71□□□□□ -1.34
VTI1BP4-201ENST00000427516 RAI14Q9P0K7 980 aa6.71□□□□□ -1.34
VTI1BP4-201ENST00000427516 HCSTQ9UBK5 93 aa6.71□□□□□ -1.34
VTI1BP4-201ENST00000427516 ADAMTS8Q9UP79 889 aa6.71□□□□□ -1.34
VTI1BP4-201ENST00000427516 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.71□□□□□ -1.34
VTI1BP4-201ENST00000427516 KDM6BO15054 1643 aa6.71□□□□□ -1.34
VTI1BP4-201ENST00000427516 ADGRL1O94910 1474 aa6.71□□□□□ -1.34
VTI1BP4-201ENST00000427516 SHANK2Q9UPX8 1470 aa6.71□□□□□ -1.34
VTI1BP4-201ENST00000427516 CCDC196A0A1B0GTZ2 297 aa6.7□□□□□ -1.34
VTI1BP4-201ENST00000427516 CYP2E1P05181 493 aaPredicted RBP6.7□□□□□ -1.34
VTI1BP4-201ENST00000427516 LIG1P18858 919 aa6.7□□□□□ -1.34
VTI1BP4-201ENST00000427516 GUCY2CP25092 1073 aa6.7□□□□□ -1.34
VTI1BP4-201ENST00000427516 SSFA2P28290 1259 aa6.7□□□□□ -1.34
VTI1BP4-201ENST00000427516 RAD51AP2Q09MP3 1159 aa6.7□□□□□ -1.34
VTI1BP4-201ENST00000427516 TYW1BQ6NUM6 668 aa6.7□□□□□ -1.34
VTI1BP4-201ENST00000427516 WWC1Q8IX03 1113 aa6.7□□□□□ -1.34
VTI1BP4-201ENST00000427516 BANK1Q8NDB2 785 aa6.7□□□□□ -1.34
VTI1BP4-201ENST00000427516 GOLGA5Q8TBA6 731 aa6.7□□□□□ -1.34
VTI1BP4-201ENST00000427516 RSPH14Q9UHP6 348 aa6.7□□□□□ -1.34
VTI1BP4-201ENST00000427516 COG6Q9Y2V7 657 aa6.7□□□□□ -1.34
VTI1BP4-201ENST00000427516 CROCC2H7BZ55 1655 aa6.69□□□□□ -1.34
VTI1BP4-201ENST00000427516 SYCE3A1L190 88 aa6.69□□□□□ -1.34
VTI1BP4-201ENST00000427516 TUBB4BP68371 445 aa6.69□□□□□ -1.34
VTI1BP4-201ENST00000427516 NCBP1Q09161 790 aaKnown RBP6.69□□□□□ -1.34
VTI1BP4-201ENST00000427516 CCDC27Q2M243 656 aa6.69□□□□□ -1.34
VTI1BP4-201ENST00000427516 TTC31Q49AM3 519 aaPredicted RBP6.69□□□□□ -1.34
VTI1BP4-201ENST00000427516 LEKR1Q6ZMV7 388 aa6.69□□□□□ -1.34
VTI1BP4-201ENST00000427516 FILIP1Q7Z7B0 1213 aa6.69□□□□□ -1.34
VTI1BP4-201ENST00000427516 AEBP1Q8IUX7 1158 aa6.69□□□□□ -1.34
VTI1BP4-201ENST00000427516 DZIP1LQ8IYY4 767 aaKnown RBP6.69□□□□□ -1.34
VTI1BP4-201ENST00000427516 CNPY4Q8N129 248 aa6.69□□□□□ -1.34
VTI1BP4-201ENST00000427516 ZNF428Q96B54 188 aa6.69□□□□□ -1.34
VTI1BP4-201ENST00000427516 KCTD12Q96CX2 325 aaKnown RBP6.69□□□□□ -1.34
VTI1BP4-201ENST00000427516 UTP14AQ9BVJ6 771 aaKnown RBP6.69□□□□□ -1.34
VTI1BP4-201ENST00000427516 SRRTQ9BXP5 876 aaKnown RBP6.69□□□□□ -1.34
VTI1BP4-201ENST00000427516 MED4Q9NPJ6 270 aa6.69□□□□□ -1.34
VTI1BP4-201ENST00000427516 BSDC1Q9NW68 430 aaPredicted RBP6.69□□□□□ -1.34
VTI1BP4-201ENST00000427516 ABCA10Q8WWZ4 1543 aa6.69□□□□□ -1.34
VTI1BP4-201ENST00000427516 ABCC10Q5T3U5 1492 aa6.68□□□□□ -1.34
VTI1BP4-201ENST00000427516 PATL2C9JE40 543 aaKnown RBP6.68□□□□□ -1.34
VTI1BP4-201ENST00000427516 KDM4AO75164 1064 aa6.68□□□□□ -1.34
VTI1BP4-201ENST00000427516 PRPF40AO75400 957 aaKnown RBP6.68□□□□□ -1.34
VTI1BP4-201ENST00000427516 COL9A1P20849 921 aa6.68□□□□□ -1.34
VTI1BP4-201ENST00000427516 PPP2R1AP30153 589 aa6.68□□□□□ -1.34
VTI1BP4-201ENST00000427516 INTS3Q68E01 1043 aaKnown RBP6.68□□□□□ -1.34
VTI1BP4-201ENST00000427516 FBXW7Q969H0 707 aa6.68□□□□□ -1.34
VTI1BP4-201ENST00000427516 INTS4Q96HW7 963 aaKnown RBP6.68□□□□□ -1.34
VTI1BP4-201ENST00000427516 PSD3Q9NYI0 1048 aa6.68□□□□□ -1.34
VTI1BP4-201ENST00000427516 DONSONQ9NYP3 566 aa6.68□□□□□ -1.34
VTI1BP4-201ENST00000427516 WDR33Q9C0J8 1336 aaKnown RBP6.68□□□□□ -1.34
VTI1BP4-201ENST00000427516 ABCC11Q96J66 1382 aa6.68□□□□□ -1.34
VTI1BP4-201ENST00000427516 PRAG1Q86YV5 1406 aa6.67□□□□□ -1.34
VTI1BP4-201ENST00000427516 MYOM2P54296 1465 aa6.67□□□□□ -1.34
VTI1BP4-201ENST00000427516 KIAA0586Q9BVV6 1533 aa6.67□□□□□ -1.34
VTI1BP4-201ENST00000427516 PPP1R3GB7ZBB8 358 aa6.67□□□□□ -1.34
VTI1BP4-201ENST00000427516 DHX16O60231 1041 aaKnown RBP6.67□□□□□ -1.34
VTI1BP4-201ENST00000427516 ADCY5O95622 1261 aa6.67□□□□□ -1.34
VTI1BP4-201ENST00000427516 ATP6V1AP38606 617 aa6.67□□□□□ -1.34
VTI1BP4-201ENST00000427516 TDO2P48775 406 aa6.67□□□□□ -1.34
VTI1BP4-201ENST00000427516 RARSP54136 660 aaKnown RBP6.67□□□□□ -1.34
VTI1BP4-201ENST00000427516 NUCB1Q02818 461 aa6.67□□□□□ -1.34
VTI1BP4-201ENST00000427516 SWT1Q5T5J6 900 aaKnown RBP6.67□□□□□ -1.34
VTI1BP4-201ENST00000427516 JAKMIP3Q5VZ66 844 aa6.67□□□□□ -1.34
VTI1BP4-201ENST00000427516 NUTM1Q86Y26 1132 aa6.67□□□□□ -1.34
VTI1BP4-201ENST00000427516 SUGP1Q8IWZ8 645 aaKnown RBP6.67□□□□□ -1.34
VTI1BP4-201ENST00000427516 KIF1BPQ96EK5 621 aa6.67□□□□□ -1.34
VTI1BP4-201ENST00000427516 EPAS1Q99814 870 aa6.67□□□□□ -1.34
VTI1BP4-201ENST00000427516 CARD10Q9BWT7 1032 aa6.67□□□□□ -1.34
VTI1BP4-201ENST00000427516 FAM53CQ9NYF3 392 aa6.67□□□□□ -1.34
VTI1BP4-201ENST00000427516 MKRN1Q9UHC7 482 aaKnown RBP6.67□□□□□ -1.34
VTI1BP4-201ENST00000427516 CHIC2Q9UKJ5 165 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms