RNA–Protein interactions for RNA: ENST00000426572.5

ZKSCAN1-202, Transcript of zinc finger with KRAB and SCAN domains 1, humanhuman

TSL 2 BASIC

Gene ZKSCAN1, Length 2,011 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN1-202ENST00000426572 PARP4Q9UKK3 1724 aaKnown RBP16.7■□□□□ 0.26
ZKSCAN1-202ENST00000426572 IPO8O15397 1037 aaKnown RBP16.69■□□□□ 0.26
ZKSCAN1-202ENST00000426572 RNMTO43148 476 aaKnown RBP16.69■□□□□ 0.26
ZKSCAN1-202ENST00000426572 EVA1CP58658 441 aa16.69■□□□□ 0.26
ZKSCAN1-202ENST00000426572 LARP1Q6PKG0 1096 aaKnown RBP16.69■□□□□ 0.26
ZKSCAN1-202ENST00000426572 CARD10Q9BWT7 1032 aa16.69■□□□□ 0.26
ZKSCAN1-202ENST00000426572 BTG4Q9NY30 223 aa16.69■□□□□ 0.26
ZKSCAN1-202ENST00000426572 KDM3BQ7LBC6 1761 aa16.68■□□□□ 0.26
ZKSCAN1-202ENST00000426572 PHKG2P15735 406 aa16.67■□□□□ 0.26
ZKSCAN1-202ENST00000426572 MVPQ14764 893 aaKnown RBP16.67■□□□□ 0.26
ZKSCAN1-202ENST00000426572 KDM6AO15550 1401 aaPredicted RBP16.66■□□□□ 0.26
ZKSCAN1-202ENST00000426572 IFNL2Q8IZJ0 200 aa16.66■□□□□ 0.26
ZKSCAN1-202ENST00000426572 SCN11AQ9UI33 1791 aa16.66■□□□□ 0.26
ZKSCAN1-202ENST00000426572 SIPA1L3O60292 1781 aaPredicted RBP16.65■□□□□ 0.26
ZKSCAN1-202ENST00000426572 BTBD11A6QL63 1104 aa16.65■□□□□ 0.26
ZKSCAN1-202ENST00000426572 CYP27B1O15528 508 aa16.65■□□□□ 0.26
ZKSCAN1-202ENST00000426572 RGS3P49796 1198 aa16.65■□□□□ 0.26
ZKSCAN1-202ENST00000426572 ARHGAP45Q92619 1136 aa16.65■□□□□ 0.26
ZKSCAN1-202ENST00000426572 IL2RBP14784 551 aa16.64■□□□□ 0.25
ZKSCAN1-202ENST00000426572 ITPRIPQ8IWB1 547 aa16.63■□□□□ 0.25
ZKSCAN1-202ENST00000426572 SOS1Q07889 1333 aaPredicted RBP16.63■□□□□ 0.25
ZKSCAN1-202ENST00000426572 PCDH11XQ9BZA7 1347 aa16.63■□□□□ 0.25
ZKSCAN1-202ENST00000426572 PCDH11YQ9BZA8 1340 aa16.63■□□□□ 0.25
ZKSCAN1-202ENST00000426572 PLCH1Q4KWH8 1693 aa16.63■□□□□ 0.25
ZKSCAN1-202ENST00000426572 ADAMTS2O95450 1211 aa16.63■□□□□ 0.25
ZKSCAN1-202ENST00000426572 TMEM57Q8N5G2 664 aa16.63■□□□□ 0.25
ZKSCAN1-202ENST00000426572 USP35Q9P2H5 1018 aa16.63■□□□□ 0.25
ZKSCAN1-202ENST00000426572 EIF4A1P60842 406 aaKnown RBP16.62■□□□□ 0.25
ZKSCAN1-202ENST00000426572 MRC1P22897 1456 aa16.62■□□□□ 0.25
ZKSCAN1-202ENST00000426572 ZCRB1Q8TBF4 217 aaKnown RBP16.62■□□□□ 0.25
ZKSCAN1-202ENST00000426572 DCAF5Q96JK2 942 aa16.62■□□□□ 0.25
ZKSCAN1-202ENST00000426572 RWDD1Q9H446 243 aaPredicted RBP16.62■□□□□ 0.25
ZKSCAN1-202ENST00000426572 DDX19BQ9UMR2 479 aa16.62■□□□□ 0.25
ZKSCAN1-202ENST00000426572 PCDHB15Q9Y5E8 787 aa16.62■□□□□ 0.25
ZKSCAN1-202ENST00000426572 ABCC4O15439 1325 aa16.61■□□□□ 0.25
ZKSCAN1-202ENST00000426572 KCNQ3O43525 872 aa16.61■□□□□ 0.25
ZKSCAN1-202ENST00000426572 SLC4A2P04920 1241 aa16.61■□□□□ 0.25
ZKSCAN1-202ENST00000426572 HSP90AB1P08238 724 aaKnown RBP16.61■□□□□ 0.25
ZKSCAN1-202ENST00000426572 SLC52A2Q9HAB3 445 aa16.61■□□□□ 0.25
ZKSCAN1-202ENST00000426572 SHANK3Q9BYB0 1731 aa16.61■□□□□ 0.25
ZKSCAN1-202ENST00000426572 CERKQ8TCT0 537 aa16.6■□□□□ 0.25
ZKSCAN1-202ENST00000426572 API5Q9BZZ5 524 aaKnown RBP16.6■□□□□ 0.25
ZKSCAN1-202ENST00000426572 NUTM2BA6NNL0 878 aaPredicted RBP16.6■□□□□ 0.25
ZKSCAN1-202ENST00000426572 NUTM2EB1AL46 878 aaPredicted RBP16.6■□□□□ 0.25
ZKSCAN1-202ENST00000426572 RTL5Q5HYW3 569 aaPredicted RBP16.6■□□□□ 0.25
ZKSCAN1-202ENST00000426572 CCDC30Q5VVM6 783 aa16.6■□□□□ 0.25
ZKSCAN1-202ENST00000426572 NUTM2AQ8IVF1 878 aaPredicted RBP16.6■□□□□ 0.25
ZKSCAN1-202ENST00000426572 STK31Q9BXU1 1019 aa16.6■□□□□ 0.25
ZKSCAN1-202ENST00000426572 RGS12O14924 1447 aa16.59■□□□□ 0.25
ZKSCAN1-202ENST00000426572 NBR1Q14596 966 aa16.59■□□□□ 0.25
ZKSCAN1-202ENST00000426572 PTPRCP08575 1304 aa16.59■□□□□ 0.25
ZKSCAN1-202ENST00000426572 NRAPQ86VF7 1730 aa16.59■□□□□ 0.25
ZKSCAN1-202ENST00000426572 HOXB7P09629 217 aa16.58■□□□□ 0.24
ZKSCAN1-202ENST00000426572 HDGFL1Q5TGJ6 251 aa16.58■□□□□ 0.24
ZKSCAN1-202ENST00000426572 NECTIN2Q92692 538 aa16.58■□□□□ 0.24
ZKSCAN1-202ENST00000426572 NFATC2IPQ8NCF5 419 aa16.57■□□□□ 0.24
ZKSCAN1-202ENST00000426572 JCADQ9P266 1359 aa16.57■□□□□ 0.24
ZKSCAN1-202ENST00000426572 DISP2A7MBM2 1401 aa16.57■□□□□ 0.24
ZKSCAN1-202ENST00000426572 HDAC1Q13547 482 aaPredicted RBP16.57■□□□□ 0.24
ZKSCAN1-202ENST00000426572 CACNA1FO60840 1977 aa16.56■□□□□ 0.24
ZKSCAN1-202ENST00000426572 ZNF790Q6PG37 636 aa16.56■□□□□ 0.24
ZKSCAN1-202ENST00000426572 G2E3Q7L622 706 aa16.56■□□□□ 0.24
ZKSCAN1-202ENST00000426572 HEG1Q9ULI3 1381 aa16.56■□□□□ 0.24
ZKSCAN1-202ENST00000426572 DDX54Q8TDD1 881 aaKnown RBP16.55■□□□□ 0.24
ZKSCAN1-202ENST00000426572 NWD2Q9ULI1 1742 aa16.55■□□□□ 0.24
ZKSCAN1-202ENST00000426572 WNK3Q9BYP7 1800 aa16.55■□□□□ 0.24
ZKSCAN1-202ENST00000426572 SLC39A6Q13433 755 aa16.55■□□□□ 0.24
ZKSCAN1-202ENST00000426572 ZBTB40Q9NUA8 1239 aa16.55■□□□□ 0.24
ZKSCAN1-202ENST00000426572 PDZRN3Q9UPQ7 1066 aa16.55■□□□□ 0.24
ZKSCAN1-202ENST00000426572 EIF2S2P20042 333 aaKnown RBP16.54■□□□□ 0.24
ZKSCAN1-202ENST00000426572 DEKP35659 375 aaKnown RBP16.54■□□□□ 0.24
ZKSCAN1-202ENST00000426572 CABP4P57796 275 aa16.54■□□□□ 0.24
ZKSCAN1-202ENST00000426572 FLIIQ13045 1269 aa16.54■□□□□ 0.24
ZKSCAN1-202ENST00000426572 SLIT2O94813 1529 aa16.54■□□□□ 0.24
ZKSCAN1-202ENST00000426572 GIGYF1O75420 1035 aaPredicted RBP16.53■□□□□ 0.24
ZKSCAN1-202ENST00000426572 NKX1-1Q15270 411 aaPredicted RBP16.53■□□□□ 0.24
ZKSCAN1-202ENST00000426572 CHMP4AQ9BY43 222 aa16.53■□□□□ 0.24
ZKSCAN1-202ENST00000426572 ZBTB7BO15156 539 aaPredicted RBP16.52■□□□□ 0.24
ZKSCAN1-202ENST00000426572 INTS3Q68E01 1043 aaKnown RBP16.52■□□□□ 0.24
ZKSCAN1-202ENST00000426572 FKBP5Q13451 457 aaPredicted RBP16.52■□□□□ 0.23
ZKSCAN1-202ENST00000426572 TTC5Q8N0Z6 440 aa16.52■□□□□ 0.23
ZKSCAN1-202ENST00000426572 CHMP4BQ9H444 224 aaKnown RBP16.52■□□□□ 0.23
ZKSCAN1-202ENST00000426572 CHPF2Q9P2E5 772 aa16.52■□□□□ 0.23
ZKSCAN1-202ENST00000426572 TOGARAM1Q9Y4F4 1720 aa16.51■□□□□ 0.23
ZKSCAN1-202ENST00000426572 SPATA31A1Q5TZJ5 1347 aa16.51■□□□□ 0.23
ZKSCAN1-202ENST00000426572 PRAMEF22A3QJZ6 481 aa16.51■□□□□ 0.23
ZKSCAN1-202ENST00000426572 ERVV-2B6SEH9 535 aa16.51■□□□□ 0.23
ZKSCAN1-202ENST00000426572 DAXXQ9UER7 740 aaPredicted RBP16.51■□□□□ 0.23
ZKSCAN1-202ENST00000426572 C5P01031 1676 aa16.51■□□□□ 0.23
ZKSCAN1-202ENST00000426572 F6X3S4 739 aa16.5■□□□□ 0.23
ZKSCAN1-202ENST00000426572 SMC5Q8IY18 1101 aa16.5■□□□□ 0.23
ZKSCAN1-202ENST00000426572 TNS2Q63HR2 1409 aa16.5■□□□□ 0.23
ZKSCAN1-202ENST00000426572 ZNF496Q96IT1 587 aaPredicted RBP16.5■□□□□ 0.23
ZKSCAN1-202ENST00000426572 PHAXQ9H814 394 aaKnown RBP16.49■□□□□ 0.23
ZKSCAN1-202ENST00000426572 THRAP3Q9Y2W1 955 aaKnown RBP16.49■□□□□ 0.23
ZKSCAN1-202ENST00000426572 SPATA31A6Q5VVP1 1343 aa16.49■□□□□ 0.23
ZKSCAN1-202ENST00000426572 GLI3P10071 1580 aa16.48■□□□□ 0.23
ZKSCAN1-202ENST00000426572 SLC4A10Q6U841 1118 aa16.48■□□□□ 0.23
ZKSCAN1-202ENST00000426572 C8orf37Q96NL8 207 aa16.48■□□□□ 0.23
ZKSCAN1-202ENST00000426572 DBF4Q9UBU7 674 aaPredicted RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms