RNA–Protein interactions for RNA: ENST00000426530.2

PTPMT1-203, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 1,014 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-203ENST00000426530 KDRP35968 1356 aa33.94■■■■□ 3.02
PTPMT1-203ENST00000426530 DCAF5Q96JK2 942 aa33.93■■■■□ 3.02
PTPMT1-203ENST00000426530 HSP90AB1P08238 724 aaKnown RBP33.92■■■■□ 3.02
PTPMT1-203ENST00000426530 ATP6V1AP38606 617 aa33.91■■■■□ 3.02
PTPMT1-203ENST00000426530 ERVV-2B6SEH9 535 aa33.9■■■■□ 3.02
PTPMT1-203ENST00000426530 C1orf141Q5JVX7 400 aa33.89■■■■□ 3.02
PTPMT1-203ENST00000426530 FLAD1Q8NFF5 587 aa33.89■■■■□ 3.02
PTPMT1-203ENST00000426530 HMOX1P09601 288 aa33.88■■■■□ 3.01
PTPMT1-203ENST00000426530 HMGB2P26583 209 aaKnown RBP33.88■■■■□ 3.01
PTPMT1-203ENST00000426530 NLGN2Q8NFZ4 835 aa33.88■■■■□ 3.01
PTPMT1-203ENST00000426530 UTRNP46939 3433 aa33.87■■■■□ 3.01
PTPMT1-203ENST00000426530 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP33.87■■■■□ 3.01
PTPMT1-203ENST00000426530 SCN11AQ9UI33 1791 aa33.86■■■■□ 3.01
PTPMT1-203ENST00000426530 CABP4P57796 275 aa33.86■■■■□ 3.01
PTPMT1-203ENST00000426530 RBM42Q9BTD8 480 aaKnown RBP33.86■■■■□ 3.01
PTPMT1-203ENST00000426530 SLC4A9Q96Q91 983 aa33.85■■■■□ 3.01
PTPMT1-203ENST00000426530 GNPATO15228 680 aa33.84■■■■□ 3.01
PTPMT1-203ENST00000426530 COL5A3P25940 1745 aaPredicted RBP33.83■■■■□ 3.01
PTPMT1-203ENST00000426530 PELP1Q8IZL8 1130 aaKnown RBP33.82■■■■□ 3
PTPMT1-203ENST00000426530 NPC1L1Q9UHC9 1359 aa33.82■■■■□ 3
PTPMT1-203ENST00000426530 COL3A1P02461 1466 aaPredicted RBP33.82■■■■□ 3
PTPMT1-203ENST00000426530 VIRMAQ69YN4 1812 aaKnown RBP33.81■■■■□ 3
PTPMT1-203ENST00000426530 ZNF831Q5JPB2 1677 aa33.81■■■■□ 3
PTPMT1-203ENST00000426530 DIAPH1O60610 1272 aaKnown RBP33.81■■■■□ 3
PTPMT1-203ENST00000426530 SSFA2P28290 1259 aa33.81■■■■□ 3
PTPMT1-203ENST00000426530 GPR162Q16538 588 aa33.8■■■■□ 3
PTPMT1-203ENST00000426530 CHD4Q14839 1912 aa33.8■■■■□ 3
PTPMT1-203ENST00000426530 NFATC2IPQ8NCF5 419 aa33.79■■■■□ 3
PTPMT1-203ENST00000426530 PTCD1O75127 700 aaKnown RBP33.76■■■□□ 2.99
PTPMT1-203ENST00000426530 AKAP4Q5JQC9 854 aa33.75■■■□□ 2.99
PTPMT1-203ENST00000426530 TJP1Q07157 1748 aa33.73■■■□□ 2.99
PTPMT1-203ENST00000426530 MYH14Q7Z406 1995 aaKnown RBP33.73■■■□□ 2.99
PTPMT1-203ENST00000426530 LGR6Q9HBX8 967 aa33.73■■■□□ 2.99
PTPMT1-203ENST00000426530 GOLGB1Q14789 3259 aaKnown RBP33.72■■■□□ 2.99
PTPMT1-203ENST00000426530 MTHFSDQ2M296 383 aaKnown RBP33.72■■■□□ 2.99
PTPMT1-203ENST00000426530 U2SURPO15042 1029 aaKnown RBP33.71■■■□□ 2.99
PTPMT1-203ENST00000426530 RTCBQ9Y3I0 505 aaKnown RBP33.7■■■□□ 2.99
PTPMT1-203ENST00000426530 MRC1P22897 1456 aa33.69■■■□□ 2.98
PTPMT1-203ENST00000426530 C4AP0C0L4 1744 aa33.69■■■□□ 2.98
PTPMT1-203ENST00000426530 CNTNAP4Q9C0A0 1308 aa33.69■■■□□ 2.98
PTPMT1-203ENST00000426530 ADAMTS7Q9UKP4 1686 aa33.68■■■□□ 2.98
PTPMT1-203ENST00000426530 RNMTO43148 476 aaKnown RBP33.67■■■□□ 2.98
PTPMT1-203ENST00000426530 YBX3P16989 372 aaKnown RBP eCLIP33.67■■■□□ 2.983e-6■■□□□ 12.9
PTPMT1-203ENST00000426530 SLC52A2Q9HAB3 445 aa33.67■■■□□ 2.98
PTPMT1-203ENST00000426530 TRAPPC3LQ5T215 181 aa33.66■■■□□ 2.98
PTPMT1-203ENST00000426530 CICQ96RK0 1608 aaPredicted RBP33.66■■■□□ 2.98
PTPMT1-203ENST00000426530 CD2APQ9Y5K6 639 aa33.66■■■□□ 2.98
PTPMT1-203ENST00000426530 RC3H1Q5TC82 1133 aaKnown RBP33.65■■■□□ 2.98
PTPMT1-203ENST00000426530 ARHGEF1Q92888 912 aaKnown RBP33.64■■■□□ 2.98
PTPMT1-203ENST00000426530 SLC39A6Q13433 755 aa33.63■■■□□ 2.97
PTPMT1-203ENST00000426530 ZNF784Q8NCA9 323 aaPredicted RBP33.63■■■□□ 2.97
PTPMT1-203ENST00000426530 RPS6KA4O75676 772 aa33.62■■■□□ 2.97
PTPMT1-203ENST00000426530 CRKLP46109 303 aaKnown RBP33.62■■■□□ 2.97
PTPMT1-203ENST00000426530 MMP10P09238 476 aa33.61■■■□□ 2.97
PTPMT1-203ENST00000426530 WWC3Q9ULE0 1092 aa33.61■■■□□ 2.97
PTPMT1-203ENST00000426530 KCPQ6ZWJ8 1503 aa33.59■■■□□ 2.97
PTPMT1-203ENST00000426530 ADRA2BP18089 450 aa33.58■■■□□ 2.97
PTPMT1-203ENST00000426530 DNAJC10Q8IXB1 793 aa33.58■■■□□ 2.97
PTPMT1-203ENST00000426530 PPP2R1AP30153 589 aa33.57■■■□□ 2.96
PTPMT1-203ENST00000426530 RFC4P35249 363 aa33.57■■■□□ 2.96
PTPMT1-203ENST00000426530 CFAP53Q96M91 514 aa33.57■■■□□ 2.96
PTPMT1-203ENST00000426530 GYS1P13807 737 aa33.56■■■□□ 2.96
PTPMT1-203ENST00000426530 UBR2Q8IWV8 1755 aa33.55■■■□□ 2.96
PTPMT1-203ENST00000426530 SRP68Q9UHB9 627 aaKnown RBP33.54■■■□□ 2.96
PTPMT1-203ENST00000426530 INTS5Q6P9B9 1019 aaKnown RBP33.53■■■□□ 2.96
PTPMT1-203ENST00000426530 NLGN1Q8N2Q7 840 aa33.53■■■□□ 2.96
PTPMT1-203ENST00000426530 KIF13BQ9NQT8 1826 aa33.53■■■□□ 2.96
PTPMT1-203ENST00000426530 GRIN3BO60391 1043 aa33.52■■■□□ 2.96
PTPMT1-203ENST00000426530 PRKAR2BP31323 418 aa33.52■■■□□ 2.96
PTPMT1-203ENST00000426530 GAS2L2Q8NHY3 880 aa33.52■■■□□ 2.96
PTPMT1-203ENST00000426530 SIPA1L3O60292 1781 aaPredicted RBP33.52■■■□□ 2.96
PTPMT1-203ENST00000426530 KIAA1551Q9HCM1 1747 aa33.51■■■□□ 2.96
PTPMT1-203ENST00000426530 PHACTR3Q96KR7 559 aa33.51■■■□□ 2.95
PTPMT1-203ENST00000426530 N4BP2Q86UW6 1770 aaPredicted RBP33.5■■■□□ 2.95
PTPMT1-203ENST00000426530 IL17REQ8NFR9 667 aa33.5■■■□□ 2.95
PTPMT1-203ENST00000426530 RSPH6AQ9H0K4 717 aa33.5■■■□□ 2.95
PTPMT1-203ENST00000426530 GNAT3A8MTJ3 354 aa33.49■■■□□ 2.95
PTPMT1-203ENST00000426530 CCDC87Q9NVE4 849 aa33.49■■■□□ 2.95
PTPMT1-203ENST00000426530 USP42Q9H9J4 1324 aaKnown RBP33.48■■■□□ 2.95
PTPMT1-203ENST00000426530 C10orf71Q711Q0 1435 aa33.47■■■□□ 2.95
PTPMT1-203ENST00000426530 CYP19A1P11511 503 aaPredicted RBP33.47■■■□□ 2.95
PTPMT1-203ENST00000426530 PXDNLA1KZ92 1463 aa33.47■■■□□ 2.95
PTPMT1-203ENST00000426530 U2AF1L5P0DN76 240 aaPredicted RBP33.46■■■□□ 2.95
PTPMT1-203ENST00000426530 U2AF1Q01081 240 aaKnown RBP eCLIP33.46■■■□□ 2.95
PTPMT1-203ENST00000426530 NUDCQ9Y266 331 aa33.46■■■□□ 2.95
PTPMT1-203ENST00000426530 TEFQ10587 303 aa33.45■■■□□ 2.95
PTPMT1-203ENST00000426530 FKBP8Q14318 412 aa33.44■■■□□ 2.94
PTPMT1-203ENST00000426530 ZBTB1Q9Y2K1 713 aa33.44■■■□□ 2.94
PTPMT1-203ENST00000426530 PARP3Q9Y6F1 533 aa33.44■■■□□ 2.94
PTPMT1-203ENST00000426530 SOS1Q07889 1333 aaPredicted RBP33.44■■■□□ 2.94
PTPMT1-203ENST00000426530 TTC5Q8N0Z6 440 aa33.43■■■□□ 2.94
PTPMT1-203ENST00000426530 COL15A1P39059 1388 aa33.39■■■□□ 2.94
PTPMT1-203ENST00000426530 A0A0G2JLW4 131 aa33.39■■■□□ 2.94
PTPMT1-203ENST00000426530 DDR1Q08345 913 aa33.39■■■□□ 2.94
PTPMT1-203ENST00000426530 USPL1Q5W0Q7 1092 aa33.39■■■□□ 2.94
PTPMT1-203ENST00000426530 VSIG10Q8N0Z9 540 aa33.39■■■□□ 2.94
PTPMT1-203ENST00000426530 ZNF496Q96IT1 587 aaPredicted RBP33.39■■■□□ 2.94
PTPMT1-203ENST00000426530 CEMIPQ8WUJ3 1361 aa33.38■■■□□ 2.93
PTPMT1-203ENST00000426530 ZNF790Q6PG37 636 aa33.38■■■□□ 2.93
PTPMT1-203ENST00000426530 ZPR1O75312 459 aa33.36■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms