RNA–Protein interactions for RNA: ENST00000425971.2

HMGB1P32-201, Transcript of high mobility group box 1 pseudogene 32, humanhuman

BASIC

Gene HMGB1P32, Length 565 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P32-201ENST00000425971 BACH1O14867 736 aa10.81□□□□□ -0.68
HMGB1P32-201ENST00000425971 ZNF598Q86UK7 904 aaKnown RBP10.81□□□□□ -0.68
HMGB1P32-201ENST00000425971 SLC4A9Q96Q91 983 aa10.81□□□□□ -0.68
HMGB1P32-201ENST00000425971 PURBQ96QR8 312 aaKnown RBP10.81□□□□□ -0.68
HMGB1P32-201ENST00000425971 PGPEP1Q9NXJ5 209 aa10.81□□□□□ -0.68
HMGB1P32-201ENST00000425971 PKD2L1Q9P0L9 805 aa10.81□□□□□ -0.68
HMGB1P32-201ENST00000425971 EGFL7Q9UHF1 273 aa10.81□□□□□ -0.68
HMGB1P32-201ENST00000425971 THOC2Q8NI27 1593 aaKnown RBP10.8□□□□□ -0.68
HMGB1P32-201ENST00000425971 FOXO3O43524 673 aa10.79□□□□□ -0.68
HMGB1P32-201ENST00000425971 NNTQ13423 1086 aa10.79□□□□□ -0.68
HMGB1P32-201ENST00000425971 FOXD4L5Q5VV16 416 aaPredicted RBP10.79□□□□□ -0.68
HMGB1P32-201ENST00000425971 TNS4Q8IZW8 715 aa10.79□□□□□ -0.68
HMGB1P32-201ENST00000425971 FOXD4L4Q8WXT5 416 aaPredicted RBP10.79□□□□□ -0.68
HMGB1P32-201ENST00000425971 ALDH1A1P00352 501 aa10.78□□□□□ -0.68
HMGB1P32-201ENST00000425971 COL26A1Q96A83 441 aa10.78□□□□□ -0.68
HMGB1P32-201ENST00000425971 SERTAD1Q9UHV2 236 aa10.78□□□□□ -0.68
HMGB1P32-201ENST00000425971 C21orf2O43822 256 aa10.77□□□□□ -0.69
HMGB1P32-201ENST00000425971 PTCD1O75127 700 aaKnown RBP10.77□□□□□ -0.69
HMGB1P32-201ENST00000425971 ADH1AP07327 375 aa10.77□□□□□ -0.69
HMGB1P32-201ENST00000425971 ESCO1Q5FWF5 840 aa10.77□□□□□ -0.69
HMGB1P32-201ENST00000425971 SEPT3Q9UH03 358 aa10.77□□□□□ -0.69
HMGB1P32-201ENST00000425971 V9GY48 417 aaPredicted RBP10.77□□□□□ -0.69
HMGB1P32-201ENST00000425971 IL2RAP01589 272 aa10.76□□□□□ -0.69
HMGB1P32-201ENST00000425971 FOXK2Q01167 660 aa10.76□□□□□ -0.69
HMGB1P32-201ENST00000425971 MTFR1Q15390 333 aa10.76□□□□□ -0.69
HMGB1P32-201ENST00000425971 CAPN12Q6ZSI9 719 aa10.76□□□□□ -0.69
HMGB1P32-201ENST00000425971 KDF1Q8NAX2 398 aaPredicted RBP10.76□□□□□ -0.69
HMGB1P32-201ENST00000425971 GAS2L2Q8NHY3 880 aa10.76□□□□□ -0.69
HMGB1P32-201ENST00000425971 MKNK1Q9BUB5 465 aa10.76□□□□□ -0.69
HMGB1P32-201ENST00000425971 KLF16Q9BXK1 252 aaPredicted RBP10.76□□□□□ -0.69
HMGB1P32-201ENST00000425971 TSPAN10Q9H1Z9 355 aaPredicted RBP10.76□□□□□ -0.69
HMGB1P32-201ENST00000425971 NESP48681 1621 aa10.76□□□□□ -0.69
HMGB1P32-201ENST00000425971 ICMTO60725 284 aa10.75□□□□□ -0.69
HMGB1P32-201ENST00000425971 RANGAP1P46060 587 aaPredicted RBP10.75□□□□□ -0.69
HMGB1P32-201ENST00000425971 FOXC1Q12948 553 aa10.75□□□□□ -0.69
HMGB1P32-201ENST00000425971 ZNF211Q13398 564 aaPredicted RBP10.75□□□□□ -0.69
HMGB1P32-201ENST00000425971 SNIP1Q8TAD8 396 aaKnown RBP10.75□□□□□ -0.69
HMGB1P32-201ENST00000425971 SCG3Q8WXD2 468 aaKnown RBP10.75□□□□□ -0.69
HMGB1P32-201ENST00000425971 XAGE2Q96GT9 111 aa10.75□□□□□ -0.69
HMGB1P32-201ENST00000425971 PRKD2Q9BZL6 878 aa10.75□□□□□ -0.69
HMGB1P32-201ENST00000425971 ARHGEF10LQ9HCE6 1279 aa10.75□□□□□ -0.69
HMGB1P32-201ENST00000425971 RAB6BQ9NRW1 208 aa10.75□□□□□ -0.69
HMGB1P32-201ENST00000425971 HRH3Q9Y5N1 445 aa10.75□□□□□ -0.69
HMGB1P32-201ENST00000425971 WASF2Q9Y6W5 498 aa10.75□□□□□ -0.69
HMGB1P32-201ENST00000425971 ATAD2Q6PL18 1390 aa10.75□□□□□ -0.69
HMGB1P32-201ENST00000425971 A6NJY4 79 aa10.74□□□□□ -0.69
HMGB1P32-201ENST00000425971 GDF9O60383 454 aa10.74□□□□□ -0.69
HMGB1P32-201ENST00000425971 ABL1P00519 1130 aa10.74□□□□□ -0.69
HMGB1P32-201ENST00000425971 SMTNP53814 917 aa10.74□□□□□ -0.69
HMGB1P32-201ENST00000425971 GTF3C2Q8WUA4 911 aaPredicted RBP10.74□□□□□ -0.69
HMGB1P32-201ENST00000425971 SCHIP1Q9P0W5 487 aaPredicted RBP10.74□□□□□ -0.69
HMGB1P32-201ENST00000425971 DNMT3AQ9Y6K1 912 aaPredicted RBP10.74□□□□□ -0.69
HMGB1P32-201ENST00000425971 DNAJC14Q6Y2X3 702 aaPredicted RBP10.73□□□□□ -0.69
HMGB1P32-201ENST00000425971 Q6ZVU0 165 aa10.73□□□□□ -0.69
HMGB1P32-201ENST00000425971 AMOTL2Q9Y2J4 779 aa10.73□□□□□ -0.69
HMGB1P32-201ENST00000425971 H3BRB1 525 aa10.72□□□□□ -0.69
HMGB1P32-201ENST00000425971 CBLBQ13191 982 aa10.72□□□□□ -0.69
HMGB1P32-201ENST00000425971 SLC9A9Q8IVB4 645 aa10.72□□□□□ -0.69
HMGB1P32-201ENST00000425971 STAG2Q8N3U4 1231 aa10.72□□□□□ -0.69
HMGB1P32-201ENST00000425971 ITPKCQ96DU7 683 aa10.72□□□□□ -0.69
HMGB1P32-201ENST00000425971 TUT1Q9H6E5 874 aaKnown RBP10.72□□□□□ -0.69
HMGB1P32-201ENST00000425971 A0A1W2PRU2 124 aa10.71□□□□□ -0.69
HMGB1P32-201ENST00000425971 CLN3Q13286 438 aa10.71□□□□□ -0.69
HMGB1P32-201ENST00000425971 SF3B2Q13435 895 aaKnown RBP10.71□□□□□ -0.69
HMGB1P32-201ENST00000425971 ECM1Q16610 540 aa10.71□□□□□ -0.69
HMGB1P32-201ENST00000425971 ESYT1Q9BSJ8 1104 aa10.71□□□□□ -0.69
HMGB1P32-201ENST00000425971 ANO2Q9NQ90 1003 aa10.71□□□□□ -0.69
HMGB1P32-201ENST00000425971 IQSEC3Q9UPP2 1182 aaPredicted RBP10.71□□□□□ -0.69
HMGB1P32-201ENST00000425971 J3QL48 77 aa10.7□□□□□ -0.7
HMGB1P32-201ENST00000425971 PPP1R12BO60237 982 aaPredicted RBP10.7□□□□□ -0.7
HMGB1P32-201ENST00000425971 NOM1Q5C9Z4 860 aaKnown RBP10.7□□□□□ -0.7
HMGB1P32-201ENST00000425971 POTEAQ6S8J7 498 aa10.7□□□□□ -0.7
HMGB1P32-201ENST00000425971 GLYCTKQ8IVS8 523 aa10.7□□□□□ -0.7
HMGB1P32-201ENST00000425971 HELQQ8TDG4 1101 aa10.7□□□□□ -0.7
HMGB1P32-201ENST00000425971 CNKSR1Q969H4 720 aa10.7□□□□□ -0.7
HMGB1P32-201ENST00000425971 C2orf49Q9BVC5 232 aaPredicted RBP10.7□□□□□ -0.7
HMGB1P32-201ENST00000425971 TOR4AQ9NXH8 423 aa10.7□□□□□ -0.7
HMGB1P32-201ENST00000425971 BIN2Q9UBW5 565 aaPredicted RBP10.7□□□□□ -0.7
HMGB1P32-201ENST00000425971 USP3Q9Y6I4 520 aa10.7□□□□□ -0.7
HMGB1P32-201ENST00000425971 ZIC2O95409 532 aaPredicted RBP10.69□□□□□ -0.7
HMGB1P32-201ENST00000425971 TIMP2P16035 220 aa10.69□□□□□ -0.7
HMGB1P32-201ENST00000425971 PTGIRP43119 386 aa10.69□□□□□ -0.7
HMGB1P32-201ENST00000425971 WDR4P57081 412 aaKnown RBP10.69□□□□□ -0.7
HMGB1P32-201ENST00000425971 TLR1Q15399 786 aa10.69□□□□□ -0.7
HMGB1P32-201ENST00000425971 FHDC1Q9C0D6 1143 aaPredicted RBP10.69□□□□□ -0.7
HMGB1P32-201ENST00000425971 ZFAND3Q9H8U3 227 aa10.69□□□□□ -0.7
HMGB1P32-201ENST00000425971 CDK2AP1O14519 115 aa10.68□□□□□ -0.7
HMGB1P32-201ENST00000425971 ERCC3P19447 782 aa10.68□□□□□ -0.7
HMGB1P32-201ENST00000425971 PSMA6P60900 246 aaKnown RBP10.68□□□□□ -0.7
HMGB1P32-201ENST00000425971 FKBP4Q02790 459 aaKnown RBP eCLIP10.68□□□□□ -0.7
HMGB1P32-201ENST00000425971 TBCELQ5QJ74 424 aa10.68□□□□□ -0.7
HMGB1P32-201ENST00000425971 TTC24A2A3L6 582 aaPredicted RBP10.67□□□□□ -0.7
HMGB1P32-201ENST00000425971 MARSP56192 900 aaKnown RBP10.67□□□□□ -0.7
HMGB1P32-201ENST00000425971 MTMR3Q13615 1198 aa10.67□□□□□ -0.7
HMGB1P32-201ENST00000425971 NAA30Q147X3 362 aaPredicted RBP10.67□□□□□ -0.7
HMGB1P32-201ENST00000425971 ZNF295-AS1Q8N0V1 137 aa10.67□□□□□ -0.7
HMGB1P32-201ENST00000425971 CYP4X1Q8N118 509 aa10.67□□□□□ -0.7
HMGB1P32-201ENST00000425971 CHMP7Q8WUX9 453 aaPredicted RBP10.67□□□□□ -0.7
HMGB1P32-201ENST00000425971 ZNF428Q96B54 188 aa10.67□□□□□ -0.7
HMGB1P32-201ENST00000425971 SMARCA2P51531 1590 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms