RNA–Protein interactions for RNA: ENST00000425049.1

SHANK2-207, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 4

Gene SHANK2, Length 557 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-207ENST00000425049 KDM6AO15550 1401 aaPredicted RBP22.36■■□□□ 1.17
SHANK2-207ENST00000425049 TAF1LQ8IZX4 1826 aa22.36■■□□□ 1.17
SHANK2-207ENST00000425049 MAP3K5Q99683 1374 aa22.35■■□□□ 1.17
SHANK2-207ENST00000425049 PHF14O94880 888 aa22.34■■□□□ 1.17
SHANK2-207ENST00000425049 MSL1Q68DK7 614 aa22.33■■□□□ 1.17
SHANK2-207ENST00000425049 LINC00116Q8NCU8 138 aa22.33■■□□□ 1.17
SHANK2-207ENST00000425049 RBM42Q9BTD8 480 aaKnown RBP22.33■■□□□ 1.17
SHANK2-207ENST00000425049 U2SURPO15042 1029 aaKnown RBP22.32■■□□□ 1.16
SHANK2-207ENST00000425049 AKAP4Q5JQC9 854 aa22.32■■□□□ 1.16
SHANK2-207ENST00000425049 CFAP53Q96M91 514 aa22.32■■□□□ 1.16
SHANK2-207ENST00000425049 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.31■■□□□ 1.16
SHANK2-207ENST00000425049 GNPATO15228 680 aa22.31■■□□□ 1.16
SHANK2-207ENST00000425049 ITPK1Q13572 414 aa22.31■■□□□ 1.16
SHANK2-207ENST00000425049 YY1P25490 414 aa22.3■■□□□ 1.16
SHANK2-207ENST00000425049 SSFA2P28290 1259 aa22.3■■□□□ 1.16
SHANK2-207ENST00000425049 COL24A1Q17RW2 1714 aa22.29■■□□□ 1.16
SHANK2-207ENST00000425049 NFATC2IPQ8NCF5 419 aa22.28■■□□□ 1.16
SHANK2-207ENST00000425049 COL3A1P02461 1466 aaPredicted RBP22.28■■□□□ 1.16
SHANK2-207ENST00000425049 UBR3Q6ZT12 1888 aa22.26■■□□□ 1.15
SHANK2-207ENST00000425049 PTCD1O75127 700 aaKnown RBP22.25■■□□□ 1.15
SHANK2-207ENST00000425049 AMIGO3Q86WK7 504 aa22.25■■□□□ 1.15
SHANK2-207ENST00000425049 RTCBQ9Y3I0 505 aaKnown RBP22.25■■□□□ 1.15
SHANK2-207ENST00000425049 GPR162Q16538 588 aa22.24■■□□□ 1.15
SHANK2-207ENST00000425049 MTHFSDQ2M296 383 aaKnown RBP22.24■■□□□ 1.15
SHANK2-207ENST00000425049 PELP1Q8IZL8 1130 aaKnown RBP22.24■■□□□ 1.15
SHANK2-207ENST00000425049 NUDCQ9Y266 331 aa22.24■■□□□ 1.15
SHANK2-207ENST00000425049 ZNF831Q5JPB2 1677 aa22.23■■□□□ 1.15
SHANK2-207ENST00000425049 SCN11AQ9UI33 1791 aa22.23■■□□□ 1.15
SHANK2-207ENST00000425049 SMIM5Q71RC9 77 aa22.23■■□□□ 1.15
SHANK2-207ENST00000425049 SLC52A2Q9HAB3 445 aa22.23■■□□□ 1.15
SHANK2-207ENST00000425049 CNTNAP4Q9C0A0 1308 aa22.23■■□□□ 1.15
SHANK2-207ENST00000425049 RNMTO43148 476 aaKnown RBP22.22■■□□□ 1.15
SHANK2-207ENST00000425049 GAS2L2Q8NHY3 880 aa22.22■■□□□ 1.15
SHANK2-207ENST00000425049 SLC4A9Q96Q91 983 aa22.22■■□□□ 1.15
SHANK2-207ENST00000425049 PPP2R1AP30153 589 aa22.21■■□□□ 1.15
SHANK2-207ENST00000425049 TRAPPC3LQ5T215 181 aa22.21■■□□□ 1.15
SHANK2-207ENST00000425049 RC3H1Q5TC82 1133 aaKnown RBP22.21■■□□□ 1.15
SHANK2-207ENST00000425049 ADRA2BP18089 450 aa22.2■■□□□ 1.14
SHANK2-207ENST00000425049 NLGN2Q8NFZ4 835 aa22.2■■□□□ 1.14
SHANK2-207ENST00000425049 LGR6Q9HBX8 967 aa22.2■■□□□ 1.14
SHANK2-207ENST00000425049 MRC1P22897 1456 aa22.2■■□□□ 1.14
SHANK2-207ENST00000425049 CD2APQ9Y5K6 639 aa22.18■■□□□ 1.14
SHANK2-207ENST00000425049 COL5A3P25940 1745 aaPredicted RBP22.17■■□□□ 1.14
SHANK2-207ENST00000425049 RPS6KA4O75676 772 aa22.17■■□□□ 1.14
SHANK2-207ENST00000425049 RFC4P35249 363 aa22.17■■□□□ 1.14
SHANK2-207ENST00000425049 GNAT3A8MTJ3 354 aa22.16■■□□□ 1.14
SHANK2-207ENST00000425049 U2AF1L5P0DN76 240 aaPredicted RBP22.16■■□□□ 1.14
SHANK2-207ENST00000425049 PRKAR2BP31323 418 aa22.16■■□□□ 1.14
SHANK2-207ENST00000425049 CRKLP46109 303 aaKnown RBP22.16■■□□□ 1.14
SHANK2-207ENST00000425049 U2AF1Q01081 240 aaKnown RBP eCLIP22.16■■□□□ 1.14
SHANK2-207ENST00000425049 TEFQ10587 303 aa22.16■■□□□ 1.14
SHANK2-207ENST00000425049 TTC5Q8N0Z6 440 aa22.15■■□□□ 1.14
SHANK2-207ENST00000425049 SLC39A6Q13433 755 aa22.14■■□□□ 1.13
SHANK2-207ENST00000425049 NLGN1Q8N2Q7 840 aa22.14■■□□□ 1.13
SHANK2-207ENST00000425049 ARHGEF1Q92888 912 aaKnown RBP22.14■■□□□ 1.13
SHANK2-207ENST00000425049 MMP10P09238 476 aa22.13■■□□□ 1.13
SHANK2-207ENST00000425049 RSPH6AQ9H0K4 717 aa22.13■■□□□ 1.13
SHANK2-207ENST00000425049 ADAMTS7Q9UKP4 1686 aa22.13■■□□□ 1.13
SHANK2-207ENST00000425049 TJP1Q07157 1748 aa22.12■■□□□ 1.13
SHANK2-207ENST00000425049 DNAJC10Q8IXB1 793 aa22.12■■□□□ 1.13
SHANK2-207ENST00000425049 CICQ96RK0 1608 aaPredicted RBP22.12■■□□□ 1.13
SHANK2-207ENST00000425049 VIRMAQ69YN4 1812 aaKnown RBP22.11■■□□□ 1.13
SHANK2-207ENST00000425049 GRIN3BO60391 1043 aa22.11■■□□□ 1.13
SHANK2-207ENST00000425049 CCDC87Q9NVE4 849 aa22.11■■□□□ 1.13
SHANK2-207ENST00000425049 NEFMP07197 916 aa22.1■■□□□ 1.13
SHANK2-207ENST00000425049 FCHSD2O94868 740 aa22.09■■□□□ 1.13
SHANK2-207ENST00000425049 VSIG10Q8N0Z9 540 aa22.09■■□□□ 1.13
SHANK2-207ENST00000425049 PHACTR3Q96KR7 559 aa22.09■■□□□ 1.13
SHANK2-207ENST00000425049 KCPQ6ZWJ8 1503 aa22.09■■□□□ 1.13
SHANK2-207ENST00000425049 GYS1P13807 737 aa22.08■■□□□ 1.13
SHANK2-207ENST00000425049 IL17REQ8NFR9 667 aa22.08■■□□□ 1.13
SHANK2-207ENST00000425049 RTF1Q92541 710 aaKnown RBP22.08■■□□□ 1.13
SHANK2-207ENST00000425049 UTRNP46939 3433 aa22.08■■□□□ 1.13
SHANK2-207ENST00000425049 MYH14Q7Z406 1995 aaKnown RBP22.08■■□□□ 1.12
SHANK2-207ENST00000425049 YBX3P16989 372 aaKnown RBP eCLIP22.07■■□□□ 1.126e-6■■■□□ 16.9
SHANK2-207ENST00000425049 INTS5Q6P9B9 1019 aaKnown RBP22.07■■□□□ 1.12
SHANK2-207ENST00000425049 PARP3Q9Y6F1 533 aa22.07■■□□□ 1.12
SHANK2-207ENST00000425049 CHD4Q14839 1912 aa22.07■■□□□ 1.12
SHANK2-207ENST00000425049 C4AP0C0L4 1744 aa22.06■■□□□ 1.12
SHANK2-207ENST00000425049 CYP19A1P11511 503 aaPredicted RBP22.06■■□□□ 1.12
SHANK2-207ENST00000425049 USP42Q9H9J4 1324 aaKnown RBP22.06■■□□□ 1.12
SHANK2-207ENST00000425049 ZPR1O75312 459 aa22.05■■□□□ 1.12
SHANK2-207ENST00000425049 STARD3NLO95772 234 aa22.05■■□□□ 1.12
SHANK2-207ENST00000425049 ZNF790Q6PG37 636 aa22.05■■□□□ 1.12
SHANK2-207ENST00000425049 SRP68Q9UHB9 627 aaKnown RBP22.05■■□□□ 1.12
SHANK2-207ENST00000425049 SOS1Q07889 1333 aaPredicted RBP22.05■■□□□ 1.12
SHANK2-207ENST00000425049 CEMIPQ8WUJ3 1361 aa22.04■■□□□ 1.12
SHANK2-207ENST00000425049 GOLGB1Q14789 3259 aaKnown RBP22.04■■□□□ 1.12
SHANK2-207ENST00000425049 UBR2Q8IWV8 1755 aa22.03■■□□□ 1.12
SHANK2-207ENST00000425049 ZNF784Q8NCA9 323 aaPredicted RBP22.03■■□□□ 1.12
SHANK2-207ENST00000425049 COL15A1P39059 1388 aa22.02■■□□□ 1.12
SHANK2-207ENST00000425049 BTBD11A6QL63 1104 aa22.02■■□□□ 1.12
SHANK2-207ENST00000425049 ZNF496Q96IT1 587 aaPredicted RBP22.02■■□□□ 1.12
SHANK2-207ENST00000425049 FMNL2Q96PY5 1086 aa22.02■■□□□ 1.12
SHANK2-207ENST00000425049 TEX13AQ9BXU3 409 aaPredicted RBP22.02■■□□□ 1.12
SHANK2-207ENST00000425049 WWC3Q9ULE0 1092 aa22.02■■□□□ 1.12
SHANK2-207ENST00000425049 ZBTB1Q9Y2K1 713 aa22.02■■□□□ 1.12
SHANK2-207ENST00000425049 HEG1Q9ULI3 1381 aa22.01■■□□□ 1.11
SHANK2-207ENST00000425049 C10orf71Q711Q0 1435 aa22.01■■□□□ 1.11
SHANK2-207ENST00000425049 FKBP8Q14318 412 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms