RNA–Protein interactions for RNA: ENST00000424830.6

PUDP-203, Transcript of pseudouridine 5'-phosphatase, humanhuman

TSL 3 BASIC

Gene PUDP, Length 1,334 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-203ENST00000424830 PLEKHG2Q9H7P9 1386 aa22.31■■□□□ 1.16
PUDP-203ENST00000424830 ATG3Q9NT62 314 aa22.31■■□□□ 1.16
PUDP-203ENST00000424830 KIF13BQ9NQT8 1826 aa22.3■■□□□ 1.16
PUDP-203ENST00000424830 POLKQ9UBT6 870 aa22.3■■□□□ 1.16
PUDP-203ENST00000424830 RTCBQ9Y3I0 505 aaKnown RBP22.3■■□□□ 1.16
PUDP-203ENST00000424830 TRAPPC3LQ5T215 181 aa22.29■■□□□ 1.16
PUDP-203ENST00000424830 PXDNLA1KZ92 1463 aa22.28■■□□□ 1.16
PUDP-203ENST00000424830 NLGN1Q8N2Q7 840 aa22.28■■□□□ 1.16
PUDP-203ENST00000424830 ZNF831Q5JPB2 1677 aa22.27■■□□□ 1.16
PUDP-203ENST00000424830 KDRP35968 1356 aa22.27■■□□□ 1.16
PUDP-203ENST00000424830 TGFB2P61812 414 aa22.27■■□□□ 1.16
PUDP-203ENST00000424830 N4BP2Q86UW6 1770 aaPredicted RBP22.26■■□□□ 1.15
PUDP-203ENST00000424830 KIF3CO14782 793 aa22.26■■□□□ 1.15
PUDP-203ENST00000424830 HSP90AB1P08238 724 aaKnown RBP22.26■■□□□ 1.15
PUDP-203ENST00000424830 EIF4A2Q14240 407 aaKnown RBP22.26■■□□□ 1.15
PUDP-203ENST00000424830 KIAA1551Q9HCM1 1747 aa22.25■■□□□ 1.15
PUDP-203ENST00000424830 ERVV-2B6SEH9 535 aa22.25■■□□□ 1.15
PUDP-203ENST00000424830 ADRA2BP18089 450 aa22.25■■□□□ 1.15
PUDP-203ENST00000424830 C10orf71Q711Q0 1435 aa22.25■■□□□ 1.15
PUDP-203ENST00000424830 RBM42Q9BTD8 480 aaKnown RBP22.25■■□□□ 1.15
PUDP-203ENST00000424830 BCS1LQ9Y276 419 aa22.25■■□□□ 1.15
PUDP-203ENST00000424830 COL5A3P25940 1745 aaPredicted RBP22.24■■□□□ 1.15
PUDP-203ENST00000424830 TNNT2P45379 298 aaPredicted RBP22.24■■□□□ 1.15
PUDP-203ENST00000424830 DCAF5Q96JK2 942 aa22.24■■□□□ 1.15
PUDP-203ENST00000424830 RC3H1Q5TC82 1133 aaKnown RBP22.23■■□□□ 1.15
PUDP-203ENST00000424830 CCDC87Q9NVE4 849 aa22.23■■□□□ 1.15
PUDP-203ENST00000424830 C4AP0C0L4 1744 aa22.23■■□□□ 1.15
PUDP-203ENST00000424830 CNTNAP4Q9C0A0 1308 aa22.22■■□□□ 1.15
PUDP-203ENST00000424830 A0A0G2JLW4 131 aa22.22■■□□□ 1.15
PUDP-203ENST00000424830 RFC4P35249 363 aa22.22■■□□□ 1.15
PUDP-203ENST00000424830 POLR3GLQ9BT43 218 aa22.22■■□□□ 1.15
PUDP-203ENST00000424830 PLEKHO1Q53GL0 409 aaPredicted RBP22.21■■□□□ 1.15
PUDP-203ENST00000424830 ARHGEF1Q92888 912 aaKnown RBP22.21■■□□□ 1.15
PUDP-203ENST00000424830 SLC4A9Q96Q91 983 aa22.21■■□□□ 1.15
PUDP-203ENST00000424830 APLP1P51693 650 aa22.2■■□□□ 1.14
PUDP-203ENST00000424830 ARHGAP27Q6ZUM4 889 aa22.2■■□□□ 1.14
PUDP-203ENST00000424830 PARP3Q9Y6F1 533 aa22.2■■□□□ 1.14
PUDP-203ENST00000424830 GYS1P13807 737 aa22.19■■□□□ 1.14
PUDP-203ENST00000424830 CABP4P57796 275 aa22.19■■□□□ 1.14
PUDP-203ENST00000424830 BRCA1P38398 1863 aaKnown RBP22.18■■□□□ 1.14
PUDP-203ENST00000424830 RPS6KA4O75676 772 aa22.18■■□□□ 1.14
PUDP-203ENST00000424830 TOMM70O94826 608 aa22.18■■□□□ 1.14
PUDP-203ENST00000424830 FCHSD2O94868 740 aa22.18■■□□□ 1.14
PUDP-203ENST00000424830 DPEP1P16444 411 aa22.18■■□□□ 1.14
PUDP-203ENST00000424830 AMOTQ4VCS5 1084 aa22.18■■□□□ 1.14
PUDP-203ENST00000424830 ZNF530Q6P9A1 599 aaPredicted RBP22.18■■□□□ 1.14
PUDP-203ENST00000424830 TIMELESSQ9UNS1 1208 aa22.18■■□□□ 1.14
PUDP-203ENST00000424830 KDM6AO15550 1401 aaPredicted RBP22.17■■□□□ 1.14
PUDP-203ENST00000424830 MYH14Q7Z406 1995 aaKnown RBP22.16■■□□□ 1.14
PUDP-203ENST00000424830 C1orf141Q5JVX7 400 aa22.15■■□□□ 1.14
PUDP-203ENST00000424830 ARFGEF1Q9Y6D6 1849 aa22.15■■□□□ 1.14
PUDP-203ENST00000424830 MTHFSP49914 203 aa22.14■■□□□ 1.14
PUDP-203ENST00000424830 PTCD1O75127 700 aaKnown RBP22.13■■□□□ 1.13
PUDP-203ENST00000424830 TRIM26Q12899 539 aaPredicted RBP22.13■■□□□ 1.13
PUDP-203ENST00000424830 NMRK2Q9NPI5 230 aa22.12■■□□□ 1.13
PUDP-203ENST00000424830 CRKLP46109 303 aaKnown RBP22.11■■□□□ 1.13
PUDP-203ENST00000424830 PIM2Q9P1W9 311 aa22.11■■□□□ 1.13
PUDP-203ENST00000424830 C9orf131Q5VYM1 1079 aa22.1■■□□□ 1.13
PUDP-203ENST00000424830 C16orf71Q8IYS4 520 aaPredicted RBP22.1■■□□□ 1.13
PUDP-203ENST00000424830 USP42Q9H9J4 1324 aaKnown RBP22.1■■□□□ 1.13
PUDP-203ENST00000424830 KCNA3P22001 575 aa22.09■■□□□ 1.13
PUDP-203ENST00000424830 DALRD3Q5D0E6 543 aaKnown RBP22.09■■□□□ 1.13
PUDP-203ENST00000424830 NFATC2IPQ8NCF5 419 aa22.09■■□□□ 1.13
PUDP-203ENST00000424830 TJP1Q07157 1748 aa22.08■■□□□ 1.13
PUDP-203ENST00000424830 AEBP1Q8IUX7 1158 aa22.08■■□□□ 1.13
PUDP-203ENST00000424830 RBM46Q8TBY0 533 aaKnown RBP22.08■■□□□ 1.13
PUDP-203ENST00000424830 PANK3Q9H999 370 aa22.08■■□□□ 1.13
PUDP-203ENST00000424830 SRP68Q9UHB9 627 aaKnown RBP22.08■■□□□ 1.13
PUDP-203ENST00000424830 FKBP8Q14318 412 aa22.07■■□□□ 1.12
PUDP-203ENST00000424830 MORC1Q86VD1 984 aa22.07■■□□□ 1.12
PUDP-203ENST00000424830 WDR90Q96KV7 1748 aa22.07■■□□□ 1.12
PUDP-203ENST00000424830 KDM2BQ8NHM5 1336 aa22.07■■□□□ 1.12
PUDP-203ENST00000424830 SCN11AQ9UI33 1791 aa22.06■■□□□ 1.12
PUDP-203ENST00000424830 DDR1Q08345 913 aa22.06■■□□□ 1.12
PUDP-203ENST00000424830 SULT6B1Q6IMI4 303 aa22.06■■□□□ 1.12
PUDP-203ENST00000424830 DNAJC5GQ8N7S2 189 aa22.06■■□□□ 1.12
PUDP-203ENST00000424830 PCGF6Q9BYE7 350 aa22.06■■□□□ 1.12
PUDP-203ENST00000424830 EIF4G2P78344 907 aaKnown RBP eCLIP22.05■■□□□ 1.12
PUDP-203ENST00000424830 RNF181Q9P0P0 153 aa22.05■■□□□ 1.12
PUDP-203ENST00000424830 CLSPNQ9HAW4 1339 aa22.04■■□□□ 1.12
PUDP-203ENST00000424830 ZPR1O75312 459 aa22.04■■□□□ 1.12
PUDP-203ENST00000424830 KCPQ6ZWJ8 1503 aa22.04■■□□□ 1.12
PUDP-203ENST00000424830 FSTL1Q12841 308 aa22.03■■□□□ 1.12
PUDP-203ENST00000424830 TNRC6CQ9HCJ0 1690 aaKnown RBP22.03■■□□□ 1.12
PUDP-203ENST00000424830 CHRNA5P30532 468 aa22.02■■□□□ 1.12
PUDP-203ENST00000424830 INTS5Q6P9B9 1019 aaKnown RBP22.02■■□□□ 1.12
PUDP-203ENST00000424830 ADAMTS7Q9UKP4 1686 aa22.01■■□□□ 1.11
PUDP-203ENST00000424830 POLRMTO00411 1230 aaKnown RBP22.01■■□□□ 1.11
PUDP-203ENST00000424830 SBF1O95248 1867 aa22.01■■□□□ 1.11
PUDP-203ENST00000424830 HSPA5P11021 654 aaKnown RBP22■■□□□ 1.11
PUDP-203ENST00000424830 AKAP4Q5JQC9 854 aa22■■□□□ 1.11
PUDP-203ENST00000424830 USPL1Q5W0Q7 1092 aa22■■□□□ 1.11
PUDP-203ENST00000424830 TM4SF1P30408 202 aa21.99■■□□□ 1.11
PUDP-203ENST00000424830 DNAJC10Q8IXB1 793 aa21.99■■□□□ 1.11
PUDP-203ENST00000424830 SLC52A2Q9HAB3 445 aa21.99■■□□□ 1.11
PUDP-203ENST00000424830 KNSTRNQ9Y448 316 aa21.99■■□□□ 1.11
PUDP-203ENST00000424830 SOS1Q07889 1333 aaPredicted RBP21.98■■□□□ 1.11
PUDP-203ENST00000424830 IL13P35225 146 aa21.98■■□□□ 1.11
PUDP-203ENST00000424830 KLRG1Q96E93 195 aa21.98■■□□□ 1.11
PUDP-203ENST00000424830 RRAGCQ9HB90 399 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms