RNA–Protein interactions for RNA: ENST00000423588.1

CACNA2D1-203, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 1, humanhuman

TSL 1 (best) BASIC

Gene CACNA2D1, Length 1,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1-203ENST00000423588 ATG3Q9NT62 314 aa27.16■■□□□ 1.94
CACNA2D1-203ENST00000423588 VIRMAQ69YN4 1812 aaKnown RBP27.16■■□□□ 1.94
CACNA2D1-203ENST00000423588 DIAPH1O60610 1272 aaKnown RBP27.14■■□□□ 1.93
CACNA2D1-203ENST00000423588 CNGB1Q14028 1251 aaPredicted RBP27.13■■□□□ 1.93
CACNA2D1-203ENST00000423588 ATP6V1AP38606 617 aa27.12■■□□□ 1.93
CACNA2D1-203ENST00000423588 CABP4P57796 275 aa27.12■■□□□ 1.93
CACNA2D1-203ENST00000423588 LINC00116Q8NCU8 138 aa27.12■■□□□ 1.93
CACNA2D1-203ENST00000423588 HMOX1P09601 288 aa27.1■■□□□ 1.93
CACNA2D1-203ENST00000423588 ITPK1Q13572 414 aa27.1■■□□□ 1.93
CACNA2D1-203ENST00000423588 COL5A3P25940 1745 aaPredicted RBP27.1■■□□□ 1.93
CACNA2D1-203ENST00000423588 COL3A1P02461 1466 aaPredicted RBP27.1■■□□□ 1.93
CACNA2D1-203ENST00000423588 AMIGO3Q86WK7 504 aa27.08■■□□□ 1.93
CACNA2D1-203ENST00000423588 KLHL34Q8N239 644 aa27.08■■□□□ 1.93
CACNA2D1-203ENST00000423588 SSFA2P28290 1259 aa27.07■■□□□ 1.92
CACNA2D1-203ENST00000423588 AKAP4Q5JQC9 854 aa27.07■■□□□ 1.92
CACNA2D1-203ENST00000423588 MSL1Q68DK7 614 aa27.07■■□□□ 1.92
CACNA2D1-203ENST00000423588 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.07■■□□□ 1.92
CACNA2D1-203ENST00000423588 PHF14O94880 888 aa27.07■■□□□ 1.92
CACNA2D1-203ENST00000423588 RBM42Q9BTD8 480 aaKnown RBP27.07■■□□□ 1.92
CACNA2D1-203ENST00000423588 YY1P25490 414 aa27.06■■□□□ 1.92
CACNA2D1-203ENST00000423588 NFATC2IPQ8NCF5 419 aa27.05■■□□□ 1.92
CACNA2D1-203ENST00000423588 CHD4Q14839 1912 aa27.05■■□□□ 1.92
CACNA2D1-203ENST00000423588 GNPATO15228 680 aa27.04■■□□□ 1.92
CACNA2D1-203ENST00000423588 SLC4A9Q96Q91 983 aa27.04■■□□□ 1.92
CACNA2D1-203ENST00000423588 SMIM5Q71RC9 77 aa27.03■■□□□ 1.92
CACNA2D1-203ENST00000423588 ADAMTS7Q9UKP4 1686 aa27.02■■□□□ 1.92
CACNA2D1-203ENST00000423588 CICQ96RK0 1608 aaPredicted RBP27.01■■□□□ 1.92
CACNA2D1-203ENST00000423588 MRC1P22897 1456 aa27.01■■□□□ 1.91
CACNA2D1-203ENST00000423588 MYH14Q7Z406 1995 aaKnown RBP27■■□□□ 1.91
CACNA2D1-203ENST00000423588 U2SURPO15042 1029 aaKnown RBP27■■□□□ 1.91
CACNA2D1-203ENST00000423588 MTHFSDQ2M296 383 aaKnown RBP27■■□□□ 1.91
CACNA2D1-203ENST00000423588 TJP1Q07157 1748 aa27■■□□□ 1.91
CACNA2D1-203ENST00000423588 PTCD1O75127 700 aaKnown RBP26.99■■□□□ 1.91
CACNA2D1-203ENST00000423588 NLGN2Q8NFZ4 835 aa26.99■■□□□ 1.91
CACNA2D1-203ENST00000423588 CFAP53Q96M91 514 aa26.99■■□□□ 1.91
CACNA2D1-203ENST00000423588 SLC52A2Q9HAB3 445 aa26.99■■□□□ 1.91
CACNA2D1-203ENST00000423588 LGR6Q9HBX8 967 aa26.99■■□□□ 1.91
CACNA2D1-203ENST00000423588 RC3H1Q5TC82 1133 aaKnown RBP26.98■■□□□ 1.91
CACNA2D1-203ENST00000423588 RTCBQ9Y3I0 505 aaKnown RBP26.98■■□□□ 1.91
CACNA2D1-203ENST00000423588 CNTNAP4Q9C0A0 1308 aa26.97■■□□□ 1.91
CACNA2D1-203ENST00000423588 RNMTO43148 476 aaKnown RBP26.97■■□□□ 1.91
CACNA2D1-203ENST00000423588 GPR162Q16538 588 aa26.96■■□□□ 1.91
CACNA2D1-203ENST00000423588 C4AP0C0L4 1744 aa26.95■■□□□ 1.9
CACNA2D1-203ENST00000423588 TRAPPC3LQ5T215 181 aa26.94■■□□□ 1.9
CACNA2D1-203ENST00000423588 CD2APQ9Y5K6 639 aa26.94■■□□□ 1.9
CACNA2D1-203ENST00000423588 ADRA2BP18089 450 aa26.93■■□□□ 1.9
CACNA2D1-203ENST00000423588 PPP2R1AP30153 589 aa26.93■■□□□ 1.9
CACNA2D1-203ENST00000423588 RPS6KA4O75676 772 aa26.92■■□□□ 1.9
CACNA2D1-203ENST00000423588 PELP1Q8IZL8 1130 aaKnown RBP26.91■■□□□ 1.9
CACNA2D1-203ENST00000423588 GAS2L2Q8NHY3 880 aa26.9■■□□□ 1.9
CACNA2D1-203ENST00000423588 NUDCQ9Y266 331 aa26.9■■□□□ 1.9
CACNA2D1-203ENST00000423588 UBR2Q8IWV8 1755 aa26.9■■□□□ 1.9
CACNA2D1-203ENST00000423588 CRKLP46109 303 aaKnown RBP26.9■■□□□ 1.9
CACNA2D1-203ENST00000423588 ARHGEF1Q92888 912 aaKnown RBP26.9■■□□□ 1.9
CACNA2D1-203ENST00000423588 SIPA1L3O60292 1781 aaPredicted RBP26.89■■□□□ 1.9
CACNA2D1-203ENST00000423588 KCPQ6ZWJ8 1503 aa26.89■■□□□ 1.89
CACNA2D1-203ENST00000423588 GNAT3A8MTJ3 354 aa26.87■■□□□ 1.89
CACNA2D1-203ENST00000423588 RFC4P35249 363 aa26.87■■□□□ 1.89
CACNA2D1-203ENST00000423588 SLC39A6Q13433 755 aa26.87■■□□□ 1.89
CACNA2D1-203ENST00000423588 RSPH6AQ9H0K4 717 aa26.87■■□□□ 1.89
CACNA2D1-203ENST00000423588 PRKAR2BP31323 418 aa26.86■■□□□ 1.89
CACNA2D1-203ENST00000423588 NLGN1Q8N2Q7 840 aa26.86■■□□□ 1.89
CACNA2D1-203ENST00000423588 UTRNP46939 3433 aa26.86■■□□□ 1.89
CACNA2D1-203ENST00000423588 KIF13BQ9NQT8 1826 aa26.85■■□□□ 1.89
CACNA2D1-203ENST00000423588 MMP10P09238 476 aa26.85■■□□□ 1.89
CACNA2D1-203ENST00000423588 DNAJC10Q8IXB1 793 aa26.84■■□□□ 1.89
CACNA2D1-203ENST00000423588 U2AF1L5P0DN76 240 aaPredicted RBP26.83■■□□□ 1.89
CACNA2D1-203ENST00000423588 U2AF1Q01081 240 aaKnown RBP eCLIP26.83■■□□□ 1.89
CACNA2D1-203ENST00000423588 GYS1P13807 737 aa26.82■■□□□ 1.88
CACNA2D1-203ENST00000423588 YBX3P16989 372 aaKnown RBP eCLIP26.82■■□□□ 1.88
CACNA2D1-203ENST00000423588 IL17REQ8NFR9 667 aa26.82■■□□□ 1.88
CACNA2D1-203ENST00000423588 PHACTR3Q96KR7 559 aa26.82■■□□□ 1.88
CACNA2D1-203ENST00000423588 GRIN3BO60391 1043 aa26.82■■□□□ 1.88
CACNA2D1-203ENST00000423588 TEFQ10587 303 aa26.82■■□□□ 1.88
CACNA2D1-203ENST00000423588 INTS5Q6P9B9 1019 aaKnown RBP26.82■■□□□ 1.88
CACNA2D1-203ENST00000423588 CCDC87Q9NVE4 849 aa26.82■■□□□ 1.88
CACNA2D1-203ENST00000423588 TTC5Q8N0Z6 440 aa26.81■■□□□ 1.88
CACNA2D1-203ENST00000423588 VSIG10Q8N0Z9 540 aa26.81■■□□□ 1.88
CACNA2D1-203ENST00000423588 GOLGB1Q14789 3259 aaKnown RBP26.79■■□□□ 1.88
CACNA2D1-203ENST00000423588 CEMIPQ8WUJ3 1361 aa26.79■■□□□ 1.88
CACNA2D1-203ENST00000423588 FCHSD2O94868 740 aa26.79■■□□□ 1.88
CACNA2D1-203ENST00000423588 CYP19A1P11511 503 aaPredicted RBP26.79■■□□□ 1.88
CACNA2D1-203ENST00000423588 USP42Q9H9J4 1324 aaKnown RBP26.78■■□□□ 1.88
CACNA2D1-203ENST00000423588 ZNF784Q8NCA9 323 aaPredicted RBP26.77■■□□□ 1.88
CACNA2D1-203ENST00000423588 KIAA1551Q9HCM1 1747 aa26.77■■□□□ 1.88
CACNA2D1-203ENST00000423588 N4BP2Q86UW6 1770 aaPredicted RBP26.76■■□□□ 1.87
CACNA2D1-203ENST00000423588 SOS1Q07889 1333 aaPredicted RBP26.76■■□□□ 1.87
CACNA2D1-203ENST00000423588 ZNF790Q6PG37 636 aa26.75■■□□□ 1.87
CACNA2D1-203ENST00000423588 SRP68Q9UHB9 627 aaKnown RBP26.75■■□□□ 1.87
CACNA2D1-203ENST00000423588 PARP3Q9Y6F1 533 aa26.75■■□□□ 1.87
CACNA2D1-203ENST00000423588 C10orf71Q711Q0 1435 aa26.74■■□□□ 1.87
CACNA2D1-203ENST00000423588 DLG5Q8TDM6 1919 aa26.73■■□□□ 1.87
CACNA2D1-203ENST00000423588 ZNF496Q96IT1 587 aaPredicted RBP26.73■■□□□ 1.87
CACNA2D1-203ENST00000423588 ZBTB1Q9Y2K1 713 aa26.73■■□□□ 1.87
CACNA2D1-203ENST00000423588 HEG1Q9ULI3 1381 aa26.72■■□□□ 1.87
CACNA2D1-203ENST00000423588 ZPR1O75312 459 aa26.72■■□□□ 1.87
CACNA2D1-203ENST00000423588 FKBP8Q14318 412 aa26.72■■□□□ 1.87
CACNA2D1-203ENST00000423588 COL15A1P39059 1388 aa26.72■■□□□ 1.87
CACNA2D1-203ENST00000423588 PXDNLA1KZ92 1463 aa26.71■■□□□ 1.87
CACNA2D1-203ENST00000423588 STARD3NLO95772 234 aa26.71■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 117.7 ms