RNA–Protein interactions for RNA: ENST00000423239.6

RC3H2-205, Transcript of ring finger and CCCH-type domains 2, humanhuman

TSL 5 BASIC

Gene RC3H2, Length 3,623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2-205ENST00000423239 RTL1A6NKG5 1358 aa16.95■□□□□ 0.3
RC3H2-205ENST00000423239 SRCIN1Q9C0H9 1055 aa16.95■□□□□ 0.3
RC3H2-205ENST00000423239 DLG5Q8TDM6 1919 aa16.94■□□□□ 0.3
RC3H2-205ENST00000423239 GSE1Q14687 1217 aa16.94■□□□□ 0.3
RC3H2-205ENST00000423239 IL1RAPL2Q9NP60 686 aa16.94■□□□□ 0.3
RC3H2-205ENST00000423239 PEAK1Q9H792 1746 aa16.93■□□□□ 0.3
RC3H2-205ENST00000423239 PI4KAP2A4QPH2 592 aa16.93■□□□□ 0.3
RC3H2-205ENST00000423239 SURF6O75683 361 aaKnown RBP16.93■□□□□ 0.3
RC3H2-205ENST00000423239 PI4KAP1Q8N8J0 262 aa16.93■□□□□ 0.3
RC3H2-205ENST00000423239 AMOTQ4VCS5 1084 aa16.93■□□□□ 0.3
RC3H2-205ENST00000423239 AKAP4Q5JQC9 854 aa16.93■□□□□ 0.3
RC3H2-205ENST00000423239 TTC22Q5TAA0 569 aa16.93■□□□□ 0.3
RC3H2-205ENST00000423239 RBM42Q9BTD8 480 aaKnown RBP16.93■□□□□ 0.3
RC3H2-205ENST00000423239 ARHGEF25Q86VW2 580 aa16.92■□□□□ 0.3
RC3H2-205ENST00000423239 ADGRL3Q9HAR2 1447 aa16.92■□□□□ 0.3
RC3H2-205ENST00000423239 C9orf78Q9NZ63 289 aaPredicted RBP16.92■□□□□ 0.3
RC3H2-205ENST00000423239 GSPT1P15170 499 aaKnown RBP16.92■□□□□ 0.3
RC3H2-205ENST00000423239 LRRCC1Q9C099 1032 aa16.92■□□□□ 0.3
RC3H2-205ENST00000423239 GZF1Q9H116 711 aaPredicted RBP16.92■□□□□ 0.3
RC3H2-205ENST00000423239 AXIN2Q9Y2T1 843 aa16.92■□□□□ 0.3
RC3H2-205ENST00000423239 CHMP4AQ9BY43 222 aa16.91■□□□□ 0.3
RC3H2-205ENST00000423239 SDSP20132 328 aa16.91■□□□□ 0.3
RC3H2-205ENST00000423239 KIF24Q5T7B8 1368 aa16.9■□□□□ 0.3
RC3H2-205ENST00000423239 PNMA6EA0A0J9YXQ4 647 aa16.9■□□□□ 0.3
RC3H2-205ENST00000423239 SLC39A6Q13433 755 aa16.9■□□□□ 0.3
RC3H2-205ENST00000423239 EIF4A1P60842 406 aaKnown RBP16.9■□□□□ 0.3
RC3H2-205ENST00000423239 CHMP5Q9NZZ3 219 aa16.9■□□□□ 0.3
RC3H2-205ENST00000423239 SRGAP3O43295 1099 aa16.89■□□□□ 0.29
RC3H2-205ENST00000423239 TATP17735 454 aaPredicted RBP16.89■□□□□ 0.29
RC3H2-205ENST00000423239 RNMTO43148 476 aaKnown RBP16.89■□□□□ 0.29
RC3H2-205ENST00000423239 DNAAF4Q8WXU2 420 aa16.89■□□□□ 0.29
RC3H2-205ENST00000423239 MYL6BP14649 208 aa16.88■□□□□ 0.29
RC3H2-205ENST00000423239 MAP4K4O95819 1239 aaPredicted RBP16.88■□□□□ 0.29
RC3H2-205ENST00000423239 NUTM1Q86Y26 1132 aa16.88■□□□□ 0.29
RC3H2-205ENST00000423239 TOPAZ1Q8N9V7 1692 aa16.88■□□□□ 0.29
RC3H2-205ENST00000423239 EIF5BO60841 1220 aaKnown RBP16.87■□□□□ 0.29
RC3H2-205ENST00000423239 ATP8B2P98198 1209 aa16.87■□□□□ 0.29
RC3H2-205ENST00000423239 PPP1R42Q7Z4L9 355 aa16.87■□□□□ 0.29
RC3H2-205ENST00000423239 NRKQ7Z2Y5 1582 aa16.87■□□□□ 0.29
RC3H2-205ENST00000423239 PIK3C2AO00443 1686 aa16.86■□□□□ 0.29
RC3H2-205ENST00000423239 PDE1AP54750 535 aa16.86■□□□□ 0.29
RC3H2-205ENST00000423239 NOL8Q76FK4 1167 aaKnown RBP16.86■□□□□ 0.29
RC3H2-205ENST00000423239 USP44Q9H0E7 712 aa16.86■□□□□ 0.29
RC3H2-205ENST00000423239 TMEM94Q12767 1356 aa16.86■□□□□ 0.29
RC3H2-205ENST00000423239 DBF4Q9UBU7 674 aaPredicted RBP16.86■□□□□ 0.29
RC3H2-205ENST00000423239 PRAMEF22A3QJZ6 481 aa16.85■□□□□ 0.29
RC3H2-205ENST00000423239 TTC5Q8N0Z6 440 aa16.85■□□□□ 0.29
RC3H2-205ENST00000423239 REC8O95072 547 aa16.85■□□□□ 0.29
RC3H2-205ENST00000423239 RBM25P49756 843 aaKnown RBP16.85■□□□□ 0.29
RC3H2-205ENST00000423239 RIC3Q7Z5B4 369 aa16.85■□□□□ 0.29
RC3H2-205ENST00000423239 MX1P20591 662 aa16.85■□□□□ 0.29
RC3H2-205ENST00000423239 ANO2Q9NQ90 1003 aa16.85■□□□□ 0.29
RC3H2-205ENST00000423239 BABAM1Q9NWV8 329 aa16.85■□□□□ 0.29
RC3H2-205ENST00000423239 MAP3K2Q9Y2U5 619 aa16.85■□□□□ 0.29
RC3H2-205ENST00000423239 NBPF7P0C2Y1 421 aaPredicted RBP16.84■□□□□ 0.29
RC3H2-205ENST00000423239 CADPS2Q86UW7 1296 aa16.84■□□□□ 0.29
RC3H2-205ENST00000423239 RGS12O14924 1447 aa16.84■□□□□ 0.29
RC3H2-205ENST00000423239 PIP4K2AP48426 406 aaPredicted RBP16.84■□□□□ 0.29
RC3H2-205ENST00000423239 NFATC2IPQ8NCF5 419 aa16.84■□□□□ 0.29
RC3H2-205ENST00000423239 SPG7Q9UQ90 795 aa16.83■□□□□ 0.29
RC3H2-205ENST00000423239 RTN4Q9NQC3 1192 aaKnown RBP16.83■□□□□ 0.28
RC3H2-205ENST00000423239 XRN1Q8IZH2 1706 aaKnown RBP16.83■□□□□ 0.28
RC3H2-205ENST00000423239 ATP10DQ9P241 1426 aa16.82■□□□□ 0.28
RC3H2-205ENST00000423239 DDX58O95786 925 aaKnown RBP16.82■□□□□ 0.28
RC3H2-205ENST00000423239 PRDM11Q9NQV5 511 aa16.82■□□□□ 0.28
RC3H2-205ENST00000423239 ERC2O15083 957 aa16.82■□□□□ 0.28
RC3H2-205ENST00000423239 CWF19L2Q2TBE0 894 aaKnown RBP16.82■□□□□ 0.28
RC3H2-205ENST00000423239 ZNF330Q9Y3S2 320 aaPredicted RBP16.82■□□□□ 0.28
RC3H2-205ENST00000423239 K7ELQ4 463 aaPredicted RBP16.82■□□□□ 0.28
RC3H2-205ENST00000423239 PROSER3Q2NL68 480 aa16.82■□□□□ 0.28
RC3H2-205ENST00000423239 NPHP3Q7Z494 1330 aa16.81■□□□□ 0.28
RC3H2-205ENST00000423239 A0A0G2JS52 829 aa16.81■□□□□ 0.28
RC3H2-205ENST00000423239 TOM1L2Q6ZVM7 507 aa16.81■□□□□ 0.28
RC3H2-205ENST00000423239 STRN4Q9NRL3 753 aa16.81■□□□□ 0.28
RC3H2-205ENST00000423239 ST18O60284 1047 aa16.8■□□□□ 0.28
RC3H2-205ENST00000423239 MCCP23508 829 aa16.8■□□□□ 0.28
RC3H2-205ENST00000423239 NEXNQ0ZGT2 675 aa16.8■□□□□ 0.28
RC3H2-205ENST00000423239 ANTXR1Q9H6X2 564 aa16.8■□□□□ 0.28
RC3H2-205ENST00000423239 GIGYF1O75420 1035 aaPredicted RBP16.79■□□□□ 0.28
RC3H2-205ENST00000423239 CD2BP2O95400 341 aaKnown RBP16.79■□□□□ 0.28
RC3H2-205ENST00000423239 FMN2Q9NZ56 1722 aa16.79■□□□□ 0.28
RC3H2-205ENST00000423239 MCM4P33991 863 aa16.79■□□□□ 0.28
RC3H2-205ENST00000423239 RABEP1Q15276 862 aa16.79■□□□□ 0.28
RC3H2-205ENST00000423239 JARID2Q92833 1246 aaPredicted RBP16.79■□□□□ 0.28
RC3H2-205ENST00000423239 ERBB3P21860 1342 aa16.79■□□□□ 0.28
RC3H2-205ENST00000423239 SOS1Q07889 1333 aaPredicted RBP16.79■□□□□ 0.28
RC3H2-205ENST00000423239 CABP4P57796 275 aa16.79■□□□□ 0.28
RC3H2-205ENST00000423239 EVA1CP58658 441 aa16.79■□□□□ 0.28
RC3H2-205ENST00000423239 DDX54Q8TDD1 881 aaKnown RBP16.78■□□□□ 0.28
RC3H2-205ENST00000423239 USP26Q9BXU7 913 aa16.78■□□□□ 0.28
RC3H2-205ENST00000423239 SIL1Q9H173 461 aa16.78■□□□□ 0.28
RC3H2-205ENST00000423239 IFNL2Q8IZJ0 200 aa16.78■□□□□ 0.28
RC3H2-205ENST00000423239 C1orf167Q5SNV9 1468 aa16.78■□□□□ 0.28
RC3H2-205ENST00000423239 FOXD4L5Q5VV16 416 aaPredicted RBP16.78■□□□□ 0.28
RC3H2-205ENST00000423239 RHPN1Q8TCX5 695 aa16.78■□□□□ 0.28
RC3H2-205ENST00000423239 FOXD4L4Q8WXT5 416 aaPredicted RBP16.78■□□□□ 0.28
RC3H2-205ENST00000423239 NALCNQ8IZF0 1738 aa16.77■□□□□ 0.28
RC3H2-205ENST00000423239 NEK4P51957 841 aa16.77■□□□□ 0.28
RC3H2-205ENST00000423239 NCLP19338 710 aaKnown RBP16.77■□□□□ 0.27
RC3H2-205ENST00000423239 BEND3Q5T5X7 828 aa16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms