RNA–Protein interactions for RNA: ENST00000422252.1

SMDT1-202, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

TSL 2

Gene SMDT1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-202ENST00000422252 YY1P25490 414 aa34.54■■■■□ 3.12
SMDT1-202ENST00000422252 CABP4P57796 275 aa34.54■■■■□ 3.12
SMDT1-202ENST00000422252 ITPK1Q13572 414 aa34.54■■■■□ 3.12
SMDT1-202ENST00000422252 KLHL34Q8N239 644 aa34.54■■■■□ 3.12
SMDT1-202ENST00000422252 DIAPH1O60610 1272 aaKnown RBP34.53■■■■□ 3.12
SMDT1-202ENST00000422252 CNGB1Q14028 1251 aaPredicted RBP34.53■■■■□ 3.12
SMDT1-202ENST00000422252 MSL1Q68DK7 614 aa34.53■■■■□ 3.12
SMDT1-202ENST00000422252 AMIGO3Q86WK7 504 aa34.52■■■■□ 3.12
SMDT1-202ENST00000422252 UBR3Q6ZT12 1888 aa34.52■■■■□ 3.12
SMDT1-202ENST00000422252 PHF14O94880 888 aa34.5■■■■□ 3.11
SMDT1-202ENST00000422252 HMOX1P09601 288 aa34.5■■■■□ 3.11
SMDT1-202ENST00000422252 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP34.49■■■■□ 3.11
SMDT1-202ENST00000422252 SSFA2P28290 1259 aa34.49■■■■□ 3.11
SMDT1-202ENST00000422252 RBM42Q9BTD8 480 aaKnown RBP34.48■■■■□ 3.11
SMDT1-202ENST00000422252 AKAP4Q5JQC9 854 aa34.47■■■■□ 3.11
SMDT1-202ENST00000422252 SMIM5Q71RC9 77 aa34.47■■■■□ 3.11
SMDT1-202ENST00000422252 SLC4A9Q96Q91 983 aa34.46■■■■□ 3.11
SMDT1-202ENST00000422252 GNPATO15228 680 aa34.45■■■■□ 3.11
SMDT1-202ENST00000422252 NFATC2IPQ8NCF5 419 aa34.45■■■■□ 3.11
SMDT1-202ENST00000422252 ZNF831Q5JPB2 1677 aa34.44■■■■□ 3.1
SMDT1-202ENST00000422252 COL3A1P02461 1466 aaPredicted RBP34.44■■■■□ 3.1
SMDT1-202ENST00000422252 NLGN2Q8NFZ4 835 aa34.42■■■■□ 3.1
SMDT1-202ENST00000422252 SCN11AQ9UI33 1791 aa34.41■■■■□ 3.1
SMDT1-202ENST00000422252 GPR162Q16538 588 aa34.39■■■■□ 3.1
SMDT1-202ENST00000422252 MTHFSDQ2M296 383 aaKnown RBP34.38■■■■□ 3.09
SMDT1-202ENST00000422252 PTCD1O75127 700 aaKnown RBP34.37■■■■□ 3.09
SMDT1-202ENST00000422252 RC3H1Q5TC82 1133 aaKnown RBP34.37■■■■□ 3.09
SMDT1-202ENST00000422252 LGR6Q9HBX8 967 aa34.37■■■■□ 3.09
SMDT1-202ENST00000422252 CNTNAP4Q9C0A0 1308 aa34.36■■■■□ 3.09
SMDT1-202ENST00000422252 U2SURPO15042 1029 aaKnown RBP34.36■■■■□ 3.09
SMDT1-202ENST00000422252 SLC52A2Q9HAB3 445 aa34.36■■■■□ 3.09
SMDT1-202ENST00000422252 RTCBQ9Y3I0 505 aaKnown RBP34.36■■■■□ 3.09
SMDT1-202ENST00000422252 COL5A3P25940 1745 aaPredicted RBP34.35■■■■□ 3.09
SMDT1-202ENST00000422252 UTRNP46939 3433 aa34.35■■■■□ 3.09
SMDT1-202ENST00000422252 RNMTO43148 476 aaKnown RBP34.34■■■■□ 3.09
SMDT1-202ENST00000422252 CD2APQ9Y5K6 639 aa34.34■■■■□ 3.09
SMDT1-202ENST00000422252 TRAPPC3LQ5T215 181 aa34.33■■■■□ 3.09
SMDT1-202ENST00000422252 PELP1Q8IZL8 1130 aaKnown RBP34.33■■■■□ 3.09
SMDT1-202ENST00000422252 CFAP53Q96M91 514 aa34.32■■■■□ 3.08
SMDT1-202ENST00000422252 MRC1P22897 1456 aa34.32■■■■□ 3.08
SMDT1-202ENST00000422252 ADRA2BP18089 450 aa34.3■■■■□ 3.08
SMDT1-202ENST00000422252 RPS6KA4O75676 772 aa34.29■■■■□ 3.08
SMDT1-202ENST00000422252 ADAMTS7Q9UKP4 1686 aa34.28■■■■□ 3.08
SMDT1-202ENST00000422252 ARHGEF1Q92888 912 aaKnown RBP34.27■■■■□ 3.08
SMDT1-202ENST00000422252 CHD4Q14839 1912 aa34.27■■■■□ 3.08
SMDT1-202ENST00000422252 VIRMAQ69YN4 1812 aaKnown RBP34.27■■■■□ 3.08
SMDT1-202ENST00000422252 CICQ96RK0 1608 aaPredicted RBP34.26■■■■□ 3.08
SMDT1-202ENST00000422252 PPP2R1AP30153 589 aa34.26■■■■□ 3.08
SMDT1-202ENST00000422252 CRKLP46109 303 aaKnown RBP34.26■■■■□ 3.08
SMDT1-202ENST00000422252 TJP1Q07157 1748 aa34.25■■■■□ 3.07
SMDT1-202ENST00000422252 GAS2L2Q8NHY3 880 aa34.25■■■■□ 3.07
SMDT1-202ENST00000422252 MYH14Q7Z406 1995 aaKnown RBP34.25■■■■□ 3.07
SMDT1-202ENST00000422252 RFC4P35249 363 aa34.23■■■■□ 3.07
SMDT1-202ENST00000422252 SLC39A6Q13433 755 aa34.23■■■■□ 3.07
SMDT1-202ENST00000422252 YBX3P16989 372 aaKnown RBP eCLIP34.22■■■■□ 3.073e-8■■□□□ 11.6
SMDT1-202ENST00000422252 NLGN1Q8N2Q7 840 aa34.22■■■■□ 3.07
SMDT1-202ENST00000422252 NUDCQ9Y266 331 aa34.22■■■■□ 3.07
SMDT1-202ENST00000422252 MMP10P09238 476 aa34.21■■■■□ 3.07
SMDT1-202ENST00000422252 GOLGB1Q14789 3259 aaKnown RBP34.2■■■■□ 3.07
SMDT1-202ENST00000422252 GNAT3A8MTJ3 354 aa34.2■■■■□ 3.07
SMDT1-202ENST00000422252 GRIN3BO60391 1043 aa34.19■■■■□ 3.06
SMDT1-202ENST00000422252 DNAJC10Q8IXB1 793 aa34.19■■■■□ 3.06
SMDT1-202ENST00000422252 RSPH6AQ9H0K4 717 aa34.19■■■■□ 3.06
SMDT1-202ENST00000422252 GYS1P13807 737 aa34.18■■■■□ 3.06
SMDT1-202ENST00000422252 PRKAR2BP31323 418 aa34.18■■■■□ 3.06
SMDT1-202ENST00000422252 KCPQ6ZWJ8 1503 aa34.18■■■■□ 3.06
SMDT1-202ENST00000422252 C4AP0C0L4 1744 aa34.17■■■■□ 3.06
SMDT1-202ENST00000422252 INTS5Q6P9B9 1019 aaKnown RBP34.17■■■■□ 3.06
SMDT1-202ENST00000422252 ZNF784Q8NCA9 323 aaPredicted RBP34.17■■■■□ 3.06
SMDT1-202ENST00000422252 IL17REQ8NFR9 667 aa34.15■■■■□ 3.06
SMDT1-202ENST00000422252 PHACTR3Q96KR7 559 aa34.15■■■■□ 3.06
SMDT1-202ENST00000422252 U2AF1L5P0DN76 240 aaPredicted RBP34.14■■■■□ 3.06
SMDT1-202ENST00000422252 U2AF1Q01081 240 aaKnown RBP eCLIP34.14■■■■□ 3.06
SMDT1-202ENST00000422252 TEFQ10587 303 aa34.14■■■■□ 3.06
SMDT1-202ENST00000422252 CCDC87Q9NVE4 849 aa34.14■■■■□ 3.06
SMDT1-202ENST00000422252 VSIG10Q8N0Z9 540 aa34.13■■■■□ 3.05
SMDT1-202ENST00000422252 CYP19A1P11511 503 aaPredicted RBP34.12■■■■□ 3.05
SMDT1-202ENST00000422252 TTC5Q8N0Z6 440 aa34.12■■■■□ 3.05
SMDT1-202ENST00000422252 USP42Q9H9J4 1324 aaKnown RBP34.11■■■■□ 3.05
SMDT1-202ENST00000422252 SRP68Q9UHB9 627 aaKnown RBP34.1■■■■□ 3.05
SMDT1-202ENST00000422252 UBR2Q8IWV8 1755 aa34.1■■■■□ 3.05
SMDT1-202ENST00000422252 FCHSD2O94868 740 aa34.09■■■■□ 3.05
SMDT1-202ENST00000422252 PARP3Q9Y6F1 533 aa34.09■■■■□ 3.05
SMDT1-202ENST00000422252 CEMIPQ8WUJ3 1361 aa34.08■■■■□ 3.05
SMDT1-202ENST00000422252 SOS1Q07889 1333 aaPredicted RBP34.07■■■■□ 3.05
SMDT1-202ENST00000422252 ZNF790Q6PG37 636 aa34.06■■■■□ 3.04
SMDT1-202ENST00000422252 KIF13BQ9NQT8 1826 aa34.06■■■■□ 3.04
SMDT1-202ENST00000422252 SIPA1L3O60292 1781 aaPredicted RBP34.06■■■■□ 3.04
SMDT1-202ENST00000422252 C10orf71Q711Q0 1435 aa34.05■■■■□ 3.04
SMDT1-202ENST00000422252 FKBP8Q14318 412 aa34.05■■■■□ 3.04
SMDT1-202ENST00000422252 ZBTB1Q9Y2K1 713 aa34.05■■■■□ 3.04
SMDT1-202ENST00000422252 WWC3Q9ULE0 1092 aa34.04■■■■□ 3.04
SMDT1-202ENST00000422252 PXDNLA1KZ92 1463 aa34.03■■■■□ 3.04
SMDT1-202ENST00000422252 ZPR1O75312 459 aa34.03■■■■□ 3.04
SMDT1-202ENST00000422252 TGFB2P61812 414 aa34.03■■■■□ 3.04
SMDT1-202ENST00000422252 ZNF496Q96IT1 587 aaPredicted RBP34.03■■■■□ 3.04
SMDT1-202ENST00000422252 COL15A1P39059 1388 aa34.01■■■■□ 3.04
SMDT1-202ENST00000422252 HEG1Q9ULI3 1381 aa34.01■■■■□ 3.04
SMDT1-202ENST00000422252 STARD3NLO95772 234 aa34.01■■■■□ 3.03
SMDT1-202ENST00000422252 USPL1Q5W0Q7 1092 aa34■■■■□ 3.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms