RNA–Protein interactions for RNA: ENST00000422190.6

ATP2C1-203, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-203ENST00000422190 PNMA6EA0A0J9YXQ4 647 aa7.79□□□□□ -1.16
ATP2C1-203ENST00000422190 KCNQ3O43525 872 aa7.79□□□□□ -1.16
ATP2C1-203ENST00000422190 CASC1Q6TDU7 716 aa7.79□□□□□ -1.16
ATP2C1-203ENST00000422190 MPRIPQ6WCQ1 1025 aa7.79□□□□□ -1.16
ATP2C1-203ENST00000422190 ANXA1P04083 346 aa7.79□□□□□ -1.16
ATP2C1-203ENST00000422190 TEFQ10587 303 aa7.79□□□□□ -1.16
ATP2C1-203ENST00000422190 KCNH5Q8NCM2 988 aa7.79□□□□□ -1.16
ATP2C1-203ENST00000422190 FMN2Q9NZ56 1722 aa7.78□□□□□ -1.16
ATP2C1-203ENST00000422190 K7ELQ4 463 aaPredicted RBP7.78□□□□□ -1.16
ATP2C1-203ENST00000422190 PDE1AP54750 535 aa7.78□□□□□ -1.16
ATP2C1-203ENST00000422190 GCP02774 474 aa7.78□□□□□ -1.16
ATP2C1-203ENST00000422190 UBTFL1P0CB47 393 aaPredicted RBP7.78□□□□□ -1.16
ATP2C1-203ENST00000422190 ATP8B2P98198 1209 aa7.78□□□□□ -1.16
ATP2C1-203ENST00000422190 USP26Q9BXU7 913 aa7.78□□□□□ -1.16
ATP2C1-203ENST00000422190 PROSER2Q86WR7 435 aaPredicted RBP7.77□□□□□ -1.16
ATP2C1-203ENST00000422190 LRRCC1Q9C099 1032 aa7.77□□□□□ -1.16
ATP2C1-203ENST00000422190 NWD1Q149M9 1564 aa7.77□□□□□ -1.17
ATP2C1-203ENST00000422190 PLEKHO1Q53GL0 409 aaPredicted RBP7.77□□□□□ -1.17
ATP2C1-203ENST00000422190 USP44Q9H0E7 712 aa7.77□□□□□ -1.17
ATP2C1-203ENST00000422190 BTBD11A6QL63 1104 aa7.77□□□□□ -1.17
ATP2C1-203ENST00000422190 TRAK2O60296 914 aa7.77□□□□□ -1.17
ATP2C1-203ENST00000422190 EIF4A1P60842 406 aaKnown RBP7.77□□□□□ -1.17
ATP2C1-203ENST00000422190 TNPO1Q92973 898 aaKnown RBP7.77□□□□□ -1.17
ATP2C1-203ENST00000422190 IL1RAPL2Q9NP60 686 aa7.77□□□□□ -1.17
ATP2C1-203ENST00000422190 BABAM1Q9NWV8 329 aa7.77□□□□□ -1.17
ATP2C1-203ENST00000422190 CHPF2Q9P2E5 772 aa7.77□□□□□ -1.17
ATP2C1-203ENST00000422190 TRIM6-TRIM34B2RNG4 842 aa7.76□□□□□ -1.17
ATP2C1-203ENST00000422190 EIF5BO60841 1220 aaKnown RBP7.76□□□□□ -1.17
ATP2C1-203ENST00000422190 RABEP1Q15276 862 aa7.76□□□□□ -1.17
ATP2C1-203ENST00000422190 C1orf141Q5JVX7 400 aa7.76□□□□□ -1.17
ATP2C1-203ENST00000422190 RILPL2Q969X0 211 aa7.76□□□□□ -1.17
ATP2C1-203ENST00000422190 SRCIN1Q9C0H9 1055 aa7.76□□□□□ -1.17
ATP2C1-203ENST00000422190 ADGRL3Q9HAR2 1447 aa7.76□□□□□ -1.17
ATP2C1-203ENST00000422190 ZC3H6P61129 1189 aaKnown RBP7.76□□□□□ -1.17
ATP2C1-203ENST00000422190 ANKRD24Q8TF21 1146 aa7.76□□□□□ -1.17
ATP2C1-203ENST00000422190 PI4KAP2A4QPH2 592 aa7.76□□□□□ -1.17
ATP2C1-203ENST00000422190 ERC2O15083 957 aa7.76□□□□□ -1.17
ATP2C1-203ENST00000422190 REC8O95072 547 aa7.76□□□□□ -1.17
ATP2C1-203ENST00000422190 DDIT3P35638 169 aa7.76□□□□□ -1.17
ATP2C1-203ENST00000422190 KRT28Q7Z3Y7 464 aa7.76□□□□□ -1.17
ATP2C1-203ENST00000422190 ARHGEF25Q86VW2 580 aa7.76□□□□□ -1.17
ATP2C1-203ENST00000422190 PI4KAP1Q8N8J0 262 aa7.76□□□□□ -1.17
ATP2C1-203ENST00000422190 SURF6O75683 361 aaKnown RBP7.75□□□□□ -1.17
ATP2C1-203ENST00000422190 MX1P20591 662 aa7.75□□□□□ -1.17
ATP2C1-203ENST00000422190 AKAP4Q5JQC9 854 aa7.75□□□□□ -1.17
ATP2C1-203ENST00000422190 CIZ1Q9ULV3 898 aaPredicted RBP7.75□□□□□ -1.17
ATP2C1-203ENST00000422190 SOS1Q07889 1333 aaPredicted RBP7.75□□□□□ -1.17
ATP2C1-203ENST00000422190 PPP1R42Q7Z4L9 355 aa7.75□□□□□ -1.17
ATP2C1-203ENST00000422190 AXIN2Q9Y2T1 843 aa7.75□□□□□ -1.17
ATP2C1-203ENST00000422190 NPHP4O75161 1426 aaPredicted RBP7.75□□□□□ -1.17
ATP2C1-203ENST00000422190 NCOA3Q9Y6Q9 1424 aa7.75□□□□□ -1.17
ATP2C1-203ENST00000422190 CEMIPQ8WUJ3 1361 aa7.75□□□□□ -1.17
ATP2C1-203ENST00000422190 DDX11L8A8MPP1 907 aa7.74□□□□□ -1.17
ATP2C1-203ENST00000422190 NBPF7P0C2Y1 421 aaPredicted RBP7.74□□□□□ -1.17
ATP2C1-203ENST00000422190 SSFA2P28290 1259 aa7.74□□□□□ -1.17
ATP2C1-203ENST00000422190 NUTM1Q86Y26 1132 aa7.74□□□□□ -1.17
ATP2C1-203ENST00000422190 DNAAF4Q8WXU2 420 aa7.74□□□□□ -1.17
ATP2C1-203ENST00000422190 GBP4Q96PP9 640 aa7.74□□□□□ -1.17
ATP2C1-203ENST00000422190 OSBPL3Q9H4L5 887 aa7.74□□□□□ -1.17
ATP2C1-203ENST00000422190 RNMTO43148 476 aaKnown RBP7.74□□□□□ -1.17
ATP2C1-203ENST00000422190 SRGAP3O43295 1099 aa7.74□□□□□ -1.17
ATP2C1-203ENST00000422190 RAB3GAP1Q15042 981 aa7.74□□□□□ -1.17
ATP2C1-203ENST00000422190 AMOTQ4VCS5 1084 aa7.74□□□□□ -1.17
ATP2C1-203ENST00000422190 DDX17Q92841 729 aaKnown RBP7.74□□□□□ -1.17
ATP2C1-203ENST00000422190 IBTKQ9P2D0 1353 aaPredicted RBP7.73□□□□□ -1.17
ATP2C1-203ENST00000422190 PRAMEF22A3QJZ6 481 aa7.73□□□□□ -1.17
ATP2C1-203ENST00000422190 MAP4K4O95819 1239 aaPredicted RBP7.73□□□□□ -1.17
ATP2C1-203ENST00000422190 ANO2Q9NQ90 1003 aa7.73□□□□□ -1.17
ATP2C1-203ENST00000422190 MARF1Q9Y4F3 1742 aaKnown RBP7.73□□□□□ -1.17
ATP2C1-203ENST00000422190 CHD2O14647 1828 aaKnown RBP7.73□□□□□ -1.17
ATP2C1-203ENST00000422190 GOLGA6L3A6NEY3 463 aa7.73□□□□□ -1.17
ATP2C1-203ENST00000422190 ST18O60284 1047 aa7.73□□□□□ -1.17
ATP2C1-203ENST00000422190 L1TD1Q5T7N2 865 aaKnown RBP7.73□□□□□ -1.17
ATP2C1-203ENST00000422190 SSH3Q8TE77 659 aa7.73□□□□□ -1.17
ATP2C1-203ENST00000422190 NLRP2Q9NX02 1062 aa7.73□□□□□ -1.17
ATP2C1-203ENST00000422190 NFAT5O94916 1531 aa7.73□□□□□ -1.17
ATP2C1-203ENST00000422190 OS9Q13438 667 aaPredicted RBP7.73□□□□□ -1.17
ATP2C1-203ENST00000422190 PROSER3Q2NL68 480 aa7.73□□□□□ -1.17
ATP2C1-203ENST00000422190 BEND3Q5T5X7 828 aa7.73□□□□□ -1.17
ATP2C1-203ENST00000422190 UNC5CLQ8IV45 518 aa7.73□□□□□ -1.17
ATP2C1-203ENST00000422190 SALL3Q9BXA9 1300 aa7.72□□□□□ -1.17
ATP2C1-203ENST00000422190 HOXB7P09629 217 aa7.72□□□□□ -1.17
ATP2C1-203ENST00000422190 AIMP1Q12904 312 aaKnown RBP7.72□□□□□ -1.17
ATP2C1-203ENST00000422190 NOL8Q76FK4 1167 aaKnown RBP7.72□□□□□ -1.17
ATP2C1-203ENST00000422190 ESYT1Q9BSJ8 1104 aa7.72□□□□□ -1.17
ATP2C1-203ENST00000422190 CHMP4AQ9BY43 222 aa7.72□□□□□ -1.17
ATP2C1-203ENST00000422190 CHMLP26374 656 aa7.72□□□□□ -1.17
ATP2C1-203ENST00000422190 NEK4P51957 841 aa7.72□□□□□ -1.17
ATP2C1-203ENST00000422190 RHPN1Q8TCX5 695 aa7.72□□□□□ -1.17
ATP2C1-203ENST00000422190 C9orf78Q9NZ63 289 aaPredicted RBP7.72□□□□□ -1.17
ATP2C1-203ENST00000422190 DBF4Q9UBU7 674 aaPredicted RBP7.72□□□□□ -1.17
ATP2C1-203ENST00000422190 MAP3K2Q9Y2U5 619 aa7.72□□□□□ -1.17
ATP2C1-203ENST00000422190 LTN1O94822 1766 aa7.72□□□□□ -1.17
ATP2C1-203ENST00000422190 GIGYF1O75420 1035 aaPredicted RBP7.71□□□□□ -1.17
ATP2C1-203ENST00000422190 SLC39A6Q13433 755 aa7.71□□□□□ -1.17
ATP2C1-203ENST00000422190 C19orf44Q9H6X5 657 aa7.71□□□□□ -1.17
ATP2C1-203ENST00000422190 LRRC37A3O60309 1634 aa7.71□□□□□ -1.17
ATP2C1-203ENST00000422190 CSB-PGBD3P0DP91 1061 aa7.71□□□□□ -1.18
ATP2C1-203ENST00000422190 ATF3P18847 181 aa7.71□□□□□ -1.18
ATP2C1-203ENST00000422190 ZGPATQ8N5A5 531 aaKnown RBP7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms