RNA–Protein interactions for RNA: ENST00000419629.1

SDCBPP3-201, Transcript of syndecan binding protein pseudogene 3, humanhuman

BASIC

Gene SDCBPP3, Length 891 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP3-201ENST00000419629 PODNQ7Z5L7 613 aa7.55□□□□□ -1.2
SDCBPP3-201ENST00000419629 XAGE2Q96GT9 111 aa7.55□□□□□ -1.2
SDCBPP3-201ENST00000419629 CFHR5Q9BXR6 569 aa7.55□□□□□ -1.2
SDCBPP3-201ENST00000419629 SNRKQ9NRH2 765 aa7.55□□□□□ -1.2
SDCBPP3-201ENST00000419629 MSTNO14793 375 aa7.54□□□□□ -1.2
SDCBPP3-201ENST00000419629 SPOCK3Q9BQ16 436 aa7.54□□□□□ -1.2
SDCBPP3-201ENST00000419629 OXCT2Q9BYC2 517 aaPredicted RBP7.54□□□□□ -1.2
SDCBPP3-201ENST00000419629 GPAMQ9HCL2 828 aa7.54□□□□□ -1.2
SDCBPP3-201ENST00000419629 A0A1B0GTH6 734 aa7.53□□□□□ -1.2
SDCBPP3-201ENST00000419629 PHKA2P46019 1235 aa7.53□□□□□ -1.2
SDCBPP3-201ENST00000419629 MAP2K3P46734 347 aa7.53□□□□□ -1.2
SDCBPP3-201ENST00000419629 UBAP2LQ14157 1087 aaKnown RBP7.53□□□□□ -1.2
SDCBPP3-201ENST00000419629 ZSCAN10Q96SZ4 725 aaPredicted RBP7.53□□□□□ -1.2
SDCBPP3-201ENST00000419629 FHDC1Q9C0D6 1143 aaPredicted RBP7.53□□□□□ -1.2
SDCBPP3-201ENST00000419629 MYCP01106 439 aaPredicted RBP7.52□□□□□ -1.21
SDCBPP3-201ENST00000419629 BRPF1P55201 1214 aaPredicted RBP7.52□□□□□ -1.21
SDCBPP3-201ENST00000419629 SNRPNP63162 240 aaKnown RBP7.52□□□□□ -1.21
SDCBPP3-201ENST00000419629 TSGA10IPQ3SY00 556 aa7.52□□□□□ -1.21
SDCBPP3-201ENST00000419629 C1orf229Q6ZS94 237 aaPredicted RBP7.52□□□□□ -1.21
SDCBPP3-201ENST00000419629 SHISA8B8ZZ34 492 aa7.51□□□□□ -1.21
SDCBPP3-201ENST00000419629 PROCP04070 461 aa7.51□□□□□ -1.21
SDCBPP3-201ENST00000419629 KLRG1Q96E93 195 aa7.51□□□□□ -1.21
SDCBPP3-201ENST00000419629 APBB1O00213 710 aa7.5□□□□□ -1.21
SDCBPP3-201ENST00000419629 C4orf17Q53FE4 359 aa7.5□□□□□ -1.21
SDCBPP3-201ENST00000419629 PHTF2Q8N3S3 785 aa7.5□□□□□ -1.21
SDCBPP3-201ENST00000419629 PHF24Q9UPV7 400 aa7.5□□□□□ -1.21
SDCBPP3-201ENST00000419629 ADAM23O75077 832 aa7.49□□□□□ -1.21
SDCBPP3-201ENST00000419629 MSX1P28360 303 aa7.49□□□□□ -1.21
SDCBPP3-201ENST00000419629 LBRQ14739 615 aaKnown RBP7.49□□□□□ -1.21
SDCBPP3-201ENST00000419629 GNASQ5JWF2 1037 aa7.49□□□□□ -1.21
SDCBPP3-201ENST00000419629 TMEM214Q6NUQ4 689 aaKnown RBP7.49□□□□□ -1.21
SDCBPP3-201ENST00000419629 GALNT6Q8NCL4 622 aa7.49□□□□□ -1.21
SDCBPP3-201ENST00000419629 RUBCNLQ9H714 662 aa7.49□□□□□ -1.21
SDCBPP3-201ENST00000419629 C2CD2LO14523 706 aa7.48□□□□□ -1.21
SDCBPP3-201ENST00000419629 STAU1O95793 577 aaKnown RBP7.48□□□□□ -1.21
SDCBPP3-201ENST00000419629 TPRNQ4KMQ1 711 aa7.48□□□□□ -1.21
SDCBPP3-201ENST00000419629 GDF2Q9UK05 429 aaPredicted RBP7.48□□□□□ -1.21
SDCBPP3-201ENST00000419629 KRBA1A5PL33 1030 aa7.47□□□□□ -1.21
SDCBPP3-201ENST00000419629 CSB-PGBD3P0DP91 1061 aa7.47□□□□□ -1.21
SDCBPP3-201ENST00000419629 GTF2E1P29083 439 aaPredicted RBP7.47□□□□□ -1.21
SDCBPP3-201ENST00000419629 ESCO1Q5FWF5 840 aa7.47□□□□□ -1.21
SDCBPP3-201ENST00000419629 PPARGC1BQ86YN6 1023 aaKnown RBP7.47□□□□□ -1.21
SDCBPP3-201ENST00000419629 PGBD3Q8N328 593 aa7.47□□□□□ -1.21
SDCBPP3-201ENST00000419629 EDARADDQ8WWZ3 215 aa7.47□□□□□ -1.21
SDCBPP3-201ENST00000419629 ETNK1Q9HBU6 452 aa7.47□□□□□ -1.21
SDCBPP3-201ENST00000419629 NDFIP2Q9NV92 336 aa7.47□□□□□ -1.21
SDCBPP3-201ENST00000419629 TBC1D2BQ9UPU7 963 aa7.47□□□□□ -1.21
SDCBPP3-201ENST00000419629 HOXB4P17483 251 aaPredicted RBP7.46□□□□□ -1.22
SDCBPP3-201ENST00000419629 COL8A1P27658 744 aa7.46□□□□□ -1.22
SDCBPP3-201ENST00000419629 USP4Q13107 963 aa7.46□□□□□ -1.22
SDCBPP3-201ENST00000419629 RHBDD1Q8TEB9 315 aa7.46□□□□□ -1.22
SDCBPP3-201ENST00000419629 CHIC2Q9UKJ5 165 aa7.46□□□□□ -1.22
SDCBPP3-201ENST00000419629 MKL2Q9ULH7 1088 aa7.46□□□□□ -1.22
SDCBPP3-201ENST00000419629 ATXN7L1Q9ULK2 861 aaPredicted RBP7.46□□□□□ -1.22
SDCBPP3-201ENST00000419629 BNIP3LO60238 219 aa7.45□□□□□ -1.22
SDCBPP3-201ENST00000419629 IRF5Q13568 498 aa7.45□□□□□ -1.22
SDCBPP3-201ENST00000419629 EFHC2Q5JST6 749 aa7.45□□□□□ -1.22
SDCBPP3-201ENST00000419629 GOLGA6L1Q8N7Z2 621 aa7.45□□□□□ -1.22
SDCBPP3-201ENST00000419629 ABHD17AQ96GS6 310 aa7.45□□□□□ -1.22
SDCBPP3-201ENST00000419629 CRISPLD1Q9H336 500 aa7.45□□□□□ -1.22
SDCBPP3-201ENST00000419629 DOLKQ9UPQ8 538 aa7.45□□□□□ -1.22
SDCBPP3-201ENST00000419629 EIF4G2P78344 907 aaKnown RBP eCLIP7.44□□□□□ -1.22
SDCBPP3-201ENST00000419629 CTBSQ01459 385 aa7.44□□□□□ -1.22
SDCBPP3-201ENST00000419629 LINC00114Q6XXX2 140 aa7.44□□□□□ -1.22
SDCBPP3-201ENST00000419629 BMP4P12644 408 aa7.43□□□□□ -1.22
SDCBPP3-201ENST00000419629 FGFR3P22607 806 aa7.43□□□□□ -1.22
SDCBPP3-201ENST00000419629 TLR1Q15399 786 aa7.43□□□□□ -1.22
SDCBPP3-201ENST00000419629 SLFNL1Q499Z3 407 aa7.43□□□□□ -1.22
SDCBPP3-201ENST00000419629 SLCO4C1Q6ZQN7 724 aa7.43□□□□□ -1.22
SDCBPP3-201ENST00000419629 ALYREFQ86V81 257 aaKnown RBP7.43□□□□□ -1.22
SDCBPP3-201ENST00000419629 RRAGCQ9HB90 399 aa7.43□□□□□ -1.22
SDCBPP3-201ENST00000419629 GGA1Q9UJY5 639 aa7.43□□□□□ -1.22
SDCBPP3-201ENST00000419629 SCNN1DP51172 638 aa7.42□□□□□ -1.22
SDCBPP3-201ENST00000419629 RNF135Q8IUD6 432 aa7.42□□□□□ -1.22
SDCBPP3-201ENST00000419629 DNAAF2Q9NVR5 837 aaKnown RBP7.42□□□□□ -1.22
SDCBPP3-201ENST00000419629 BAG6P46379 1132 aa7.41□□□□□ -1.22
SDCBPP3-201ENST00000419629 OXLD1Q5BKU9 147 aa7.41□□□□□ -1.22
SDCBPP3-201ENST00000419629 XP32Q5T750 250 aa7.41□□□□□ -1.22
SDCBPP3-201ENST00000419629 ZCCHC2Q9C0B9 1178 aaKnown RBP7.41□□□□□ -1.22
SDCBPP3-201ENST00000419629 SUV39H2Q9H5I1 410 aa7.41□□□□□ -1.22
SDCBPP3-201ENST00000419629 INHAP05111 366 aa7.4□□□□□ -1.22
SDCBPP3-201ENST00000419629 EPXP11678 715 aa7.4□□□□□ -1.22
SDCBPP3-201ENST00000419629 ATP4AP20648 1035 aa7.4□□□□□ -1.22
SDCBPP3-201ENST00000419629 PLA2G4AP47712 749 aa7.4□□□□□ -1.22
SDCBPP3-201ENST00000419629 TBC1D9Q6ZT07 1266 aa7.4□□□□□ -1.22
SDCBPP3-201ENST00000419629 SIRT1Q96EB6 747 aa7.4□□□□□ -1.22
SDCBPP3-201ENST00000419629 BTBD6Q96KE9 485 aa7.4□□□□□ -1.22
SDCBPP3-201ENST00000419629 HCN2Q9UL51 889 aa7.4□□□□□ -1.22
SDCBPP3-201ENST00000419629 PCDHGC4Q9Y5F7 938 aa7.4□□□□□ -1.22
SDCBPP3-201ENST00000419629 K7ELQ4 463 aaPredicted RBP7.39□□□□□ -1.23
SDCBPP3-201ENST00000419629 ARAFP10398 606 aa7.39□□□□□ -1.23
SDCBPP3-201ENST00000419629 AMPD1P23109 780 aa7.39□□□□□ -1.23
SDCBPP3-201ENST00000419629 GDF10P55107 478 aa7.39□□□□□ -1.23
SDCBPP3-201ENST00000419629 FIGNL1Q6PIW4 674 aa7.39□□□□□ -1.23
SDCBPP3-201ENST00000419629 NLRP8Q86W28 1048 aa7.39□□□□□ -1.23
SDCBPP3-201ENST00000419629 ZNF295-AS1Q8N0V1 137 aa7.39□□□□□ -1.23
SDCBPP3-201ENST00000419629 C1orf216Q8TAB5 229 aa7.39□□□□□ -1.23
SDCBPP3-201ENST00000419629 PRM3Q9NNZ6 103 aa7.39□□□□□ -1.23
SDCBPP3-201ENST00000419629 SMTNP53814 917 aa7.38□□□□□ -1.23
SDCBPP3-201ENST00000419629 VAC14Q08AM6 782 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms