RNA–Protein interactions for RNA: ENST00000417709.5

TTC38-202, Transcript of tetratricopeptide repeat domain 38, humanhuman

TSL 3

Gene TTC38, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC38-202ENST00000417709 RBM42Q9BTD8 480 aaKnown RBP19.71■□□□□ 0.75
TTC38-202ENST00000417709 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.71■□□□□ 0.753e-9■■■□□ 18.2
TTC38-202ENST00000417709 WASHC2AQ641Q2 1341 aa19.71■□□□□ 0.75
TTC38-202ENST00000417709 NLGN1Q8N2Q7 840 aa19.7■□□□□ 0.74
TTC38-202ENST00000417709 RTCBQ9Y3I0 505 aaKnown RBP19.7■□□□□ 0.74
TTC38-202ENST00000417709 TNNT2P45379 298 aaPredicted RBP19.69■□□□□ 0.74
TTC38-202ENST00000417709 TGFB2P61812 414 aa19.69■□□□□ 0.74
TTC38-202ENST00000417709 PKD1L3Q7Z443 1732 aa19.68■□□□□ 0.74
TTC38-202ENST00000417709 ARHGEF1Q92888 912 aaKnown RBP19.68■□□□□ 0.74
TTC38-202ENST00000417709 POLKQ9UBT6 870 aa19.68■□□□□ 0.74
TTC38-202ENST00000417709 N4BP2Q86UW6 1770 aaPredicted RBP19.67■□□□□ 0.74
TTC38-202ENST00000417709 FCHSD2O94868 740 aa19.67■□□□□ 0.74
TTC38-202ENST00000417709 DPEP1P16444 411 aa19.67■□□□□ 0.74
TTC38-202ENST00000417709 APLP1P51693 650 aa19.67■□□□□ 0.74
TTC38-202ENST00000417709 SLC4A9Q96Q91 983 aa19.67■□□□□ 0.74
TTC38-202ENST00000417709 TOMM70O94826 608 aa19.66■□□□□ 0.74
TTC38-202ENST00000417709 POLR3GLQ9BT43 218 aa19.66■□□□□ 0.74
TTC38-202ENST00000417709 PCNTO95613 3336 aa19.65■□□□□ 0.74
TTC38-202ENST00000417709 RFC4P35249 363 aa19.65■□□□□ 0.74
TTC38-202ENST00000417709 DNAJC5GQ8N7S2 189 aa19.65■□□□□ 0.74
TTC38-202ENST00000417709 NMRK2Q9NPI5 230 aa19.65■□□□□ 0.74
TTC38-202ENST00000417709 ERVV-2B6SEH9 535 aa19.64■□□□□ 0.73
TTC38-202ENST00000417709 EIF4A2Q14240 407 aaKnown RBP19.64■□□□□ 0.73
TTC38-202ENST00000417709 CCDC87Q9NVE4 849 aa19.64■□□□□ 0.73
TTC38-202ENST00000417709 PARP3Q9Y6F1 533 aa19.64■□□□□ 0.73
TTC38-202ENST00000417709 PXDNLA1KZ92 1463 aa19.63■□□□□ 0.73
TTC38-202ENST00000417709 NCAPD2Q15021 1401 aa19.63■□□□□ 0.73
TTC38-202ENST00000417709 GYS1P13807 737 aa19.63■□□□□ 0.73
TTC38-202ENST00000417709 RC3H1Q5TC82 1133 aaKnown RBP19.63■□□□□ 0.73
TTC38-202ENST00000417709 RPS6KA4O75676 772 aa19.61■□□□□ 0.73
TTC38-202ENST00000417709 CABP4P57796 275 aa19.61■□□□□ 0.73
TTC38-202ENST00000417709 C9orf131Q5VYM1 1079 aa19.61■□□□□ 0.73
TTC38-202ENST00000417709 PTCD1O75127 700 aaKnown RBP19.6■□□□□ 0.73
TTC38-202ENST00000417709 KCNA3P22001 575 aa19.6■□□□□ 0.73
TTC38-202ENST00000417709 PLEKHO1Q53GL0 409 aaPredicted RBP19.6■□□□□ 0.73
TTC38-202ENST00000417709 DCAF5Q96JK2 942 aa19.6■□□□□ 0.73
TTC38-202ENST00000417709 CICQ96RK0 1608 aaPredicted RBP19.6■□□□□ 0.73
TTC38-202ENST00000417709 KIF13BQ9NQT8 1826 aa19.6■□□□□ 0.73
TTC38-202ENST00000417709 ADRA2BP18089 450 aa19.59■□□□□ 0.73
TTC38-202ENST00000417709 C16orf71Q8IYS4 520 aaPredicted RBP19.59■□□□□ 0.73
TTC38-202ENST00000417709 MYH14Q7Z406 1995 aaKnown RBP19.58■□□□□ 0.73
TTC38-202ENST00000417709 HSP90AB1P08238 724 aaKnown RBP19.58■□□□□ 0.72
TTC38-202ENST00000417709 HTRA3P83110 453 aa19.58■□□□□ 0.72
TTC38-202ENST00000417709 ZNF530Q6P9A1 599 aaPredicted RBP19.58■□□□□ 0.72
TTC38-202ENST00000417709 PIM2Q9P1W9 311 aa19.58■□□□□ 0.72
TTC38-202ENST00000417709 MTHFSP49914 203 aa19.57■□□□□ 0.72
TTC38-202ENST00000417709 NFATC2IPQ8NCF5 419 aa19.57■□□□□ 0.72
TTC38-202ENST00000417709 SRP68Q9UHB9 627 aaKnown RBP19.57■□□□□ 0.72
TTC38-202ENST00000417709 KIAA1551Q9HCM1 1747 aa19.56■□□□□ 0.72
TTC38-202ENST00000417709 DALRD3Q5D0E6 543 aaKnown RBP19.56■□□□□ 0.72
TTC38-202ENST00000417709 CNTNAP4Q9C0A0 1308 aa19.55■□□□□ 0.72
TTC38-202ENST00000417709 FKBP8Q14318 412 aa19.55■□□□□ 0.72
TTC38-202ENST00000417709 C10orf71Q711Q0 1435 aa19.55■□□□□ 0.72
TTC38-202ENST00000417709 RBM46Q8TBY0 533 aaKnown RBP19.55■□□□□ 0.72
TTC38-202ENST00000417709 RRAGCQ9HB90 399 aa19.55■□□□□ 0.72
TTC38-202ENST00000417709 KDRP35968 1356 aa19.55■□□□□ 0.72
TTC38-202ENST00000417709 ANKRD26Q9UPS8 1709 aa19.54■□□□□ 0.72
TTC38-202ENST00000417709 CRKLP46109 303 aaKnown RBP19.54■□□□□ 0.72
TTC38-202ENST00000417709 C4AP0C0L4 1744 aa19.54■□□□□ 0.72
TTC38-202ENST00000417709 CHRNA5P30532 468 aa19.53■□□□□ 0.72
TTC38-202ENST00000417709 AMOTQ4VCS5 1084 aa19.53■□□□□ 0.72
TTC38-202ENST00000417709 RNF181Q9P0P0 153 aa19.53■□□□□ 0.72
TTC38-202ENST00000417709 C1orf141Q5JVX7 400 aa19.52■□□□□ 0.72
TTC38-202ENST00000417709 DDR1Q08345 913 aa19.51■□□□□ 0.71
TTC38-202ENST00000417709 AEBP1Q8IUX7 1158 aa19.51■□□□□ 0.71
TTC38-202ENST00000417709 KDM2BQ8NHM5 1336 aa19.51■□□□□ 0.71
TTC38-202ENST00000417709 BRCA1P38398 1863 aaKnown RBP19.5■□□□□ 0.71
TTC38-202ENST00000417709 COL5A3P25940 1745 aaPredicted RBP19.49■□□□□ 0.71
TTC38-202ENST00000417709 FSTL1Q12841 308 aa19.49■□□□□ 0.71
TTC38-202ENST00000417709 INTS5Q6P9B9 1019 aaKnown RBP19.49■□□□□ 0.71
TTC38-202ENST00000417709 KLRG1Q96E93 195 aa19.49■□□□□ 0.71
TTC38-202ENST00000417709 PANK3Q9H999 370 aa19.49■□□□□ 0.71
TTC38-202ENST00000417709 KDM6AO15550 1401 aaPredicted RBP19.49■□□□□ 0.71
TTC38-202ENST00000417709 ARFGEF1Q9Y6D6 1849 aa19.48■□□□□ 0.71
TTC38-202ENST00000417709 ZPR1O75312 459 aa19.48■□□□□ 0.71
TTC38-202ENST00000417709 TM4SF1P30408 202 aa19.48■□□□□ 0.71
TTC38-202ENST00000417709 COL13A1Q5TAT6 717 aaPredicted RBP19.48■□□□□ 0.71
TTC38-202ENST00000417709 SULT6B1Q6IMI4 303 aa19.48■□□□□ 0.71
TTC38-202ENST00000417709 ZNF831Q5JPB2 1677 aa19.48■□□□□ 0.71
TTC38-202ENST00000417709 USP42Q9H9J4 1324 aaKnown RBP19.48■□□□□ 0.71
TTC38-202ENST00000417709 KCPQ6ZWJ8 1503 aa19.47■□□□□ 0.71
TTC38-202ENST00000417709 MORC1Q86VD1 984 aa19.47■□□□□ 0.71
TTC38-202ENST00000417709 SBF1O95248 1867 aa19.46■□□□□ 0.71
TTC38-202ENST00000417709 USPL1Q5W0Q7 1092 aa19.46■□□□□ 0.71
TTC38-202ENST00000417709 PLEKHG2Q9H7P9 1386 aa19.45■□□□□ 0.7
TTC38-202ENST00000417709 POLRMTO00411 1230 aaKnown RBP19.45■□□□□ 0.7
TTC38-202ENST00000417709 CAPN15O75808 1086 aa19.45■□□□□ 0.7
TTC38-202ENST00000417709 DNAJC10Q8IXB1 793 aa19.45■□□□□ 0.7
TTC38-202ENST00000417709 WDR90Q96KV7 1748 aa19.45■□□□□ 0.7
TTC38-202ENST00000417709 JMYQ8N9B5 988 aa19.43■□□□□ 0.7
TTC38-202ENST00000417709 LGR6Q9HBX8 967 aa19.43■□□□□ 0.7
TTC38-202ENST00000417709 RASSF7Q02833 373 aa19.42■□□□□ 0.7
TTC38-202ENST00000417709 SLC39A6Q13433 755 aa19.41■□□□□ 0.7
TTC38-202ENST00000417709 SMC1BQ8NDV3 1235 aa19.41■□□□□ 0.7
TTC38-202ENST00000417709 CYP19A1P11511 503 aaPredicted RBP19.4■□□□□ 0.7
TTC38-202ENST00000417709 NFIXQ14938 502 aa19.4■□□□□ 0.7
TTC38-202ENST00000417709 TIMELESSQ9UNS1 1208 aa19.4■□□□□ 0.7
TTC38-202ENST00000417709 LMNB1P20700 586 aa19.39■□□□□ 0.69
TTC38-202ENST00000417709 IL13P35225 146 aa19.39■□□□□ 0.69
TTC38-202ENST00000417709 TRIM26Q12899 539 aaPredicted RBP19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 111.2 ms