RNA–Protein interactions for RNA: ENST00000417641.6

VRK2-203, Transcript of vaccinia related kinase 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VRK2, Length 2,381 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-203ENST00000417641 AATKQ6ZMQ8 1374 aa9.53□□□□□ -0.88
VRK2-203ENST00000417641 ATP7BP35670 1465 aa9.53□□□□□ -0.88
VRK2-203ENST00000417641 PTPRCP08575 1304 aa9.53□□□□□ -0.88
VRK2-203ENST00000417641 SSH2Q76I76 1423 aa9.52□□□□□ -0.88
VRK2-203ENST00000417641 AP5Z1O43299 807 aa9.52□□□□□ -0.88
VRK2-203ENST00000417641 IDI1Q13907 227 aa9.52□□□□□ -0.88
VRK2-203ENST00000417641 CCDC183Q5T5S1 534 aa9.52□□□□□ -0.88
VRK2-203ENST00000417641 KIF3AQ9Y496 699 aa9.52□□□□□ -0.88
VRK2-203ENST00000417641 CFAP65Q6ZU64 1925 aaKnown RBP9.52□□□□□ -0.89
VRK2-203ENST00000417641 CHL1O00533 1208 aa9.52□□□□□ -0.89
VRK2-203ENST00000417641 KDM4AO75164 1064 aa9.52□□□□□ -0.89
VRK2-203ENST00000417641 MX1P20591 662 aa9.52□□□□□ -0.89
VRK2-203ENST00000417641 KIAA1524Q8TCG1 905 aa9.52□□□□□ -0.89
VRK2-203ENST00000417641 GDPD2Q9HCC8 539 aa9.52□□□□□ -0.89
VRK2-203ENST00000417641 WDR33Q9C0J8 1336 aaKnown RBP9.52□□□□□ -0.89
VRK2-203ENST00000417641 CTIFO43310 598 aaKnown RBP9.51□□□□□ -0.89
VRK2-203ENST00000417641 EPB41L2O43491 1005 aaKnown RBP9.51□□□□□ -0.89
VRK2-203ENST00000417641 KIF20AO95235 890 aa9.51□□□□□ -0.89
VRK2-203ENST00000417641 CHMLP26374 656 aa9.51□□□□□ -0.89
VRK2-203ENST00000417641 DCTN1Q14203 1278 aa9.51□□□□□ -0.89
VRK2-203ENST00000417641 PPP4R3BQ5MIZ7 849 aa9.51□□□□□ -0.89
VRK2-203ENST00000417641 KCNF1Q9H3M0 494 aa9.51□□□□□ -0.89
VRK2-203ENST00000417641 LETM1O95202 739 aaPredicted RBP9.51□□□□□ -0.89
VRK2-203ENST00000417641 CBX1P83916 185 aa9.51□□□□□ -0.89
VRK2-203ENST00000417641 DNTTIP2Q5QJE6 756 aaKnown RBP9.51□□□□□ -0.89
VRK2-203ENST00000417641 MPNDQ8N594 471 aa9.51□□□□□ -0.89
VRK2-203ENST00000417641 SRCIN1Q9C0H9 1055 aa9.51□□□□□ -0.89
VRK2-203ENST00000417641 MAP2P11137 1827 aaKnown RBP9.5□□□□□ -0.89
VRK2-203ENST00000417641 HCLS1P14317 486 aaPredicted RBP9.5□□□□□ -0.89
VRK2-203ENST00000417641 FAM177BA6PVY3 158 aa9.5□□□□□ -0.89
VRK2-203ENST00000417641 APBB1O00213 710 aa9.5□□□□□ -0.89
VRK2-203ENST00000417641 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.5□□□□□ -0.89
VRK2-203ENST00000417641 STAP2Q9UGK3 403 aa9.5□□□□□ -0.89
VRK2-203ENST00000417641 TMEM131LA2VDJ0 1609 aa9.49□□□□□ -0.89
VRK2-203ENST00000417641 HMMRO75330 724 aa9.49□□□□□ -0.89
VRK2-203ENST00000417641 MCCP23508 829 aa9.49□□□□□ -0.89
VRK2-203ENST00000417641 PYCARDQ9ULZ3 195 aa9.49□□□□□ -0.89
VRK2-203ENST00000417641 RIOK3O14730 519 aaKnown RBP9.49□□□□□ -0.89
VRK2-203ENST00000417641 HAP1P54257 671 aaPredicted RBP9.49□□□□□ -0.89
VRK2-203ENST00000417641 UBE2HP62256 183 aa9.49□□□□□ -0.89
VRK2-203ENST00000417641 SLC52A1Q9NWF4 448 aa9.49□□□□□ -0.89
VRK2-203ENST00000417641 CNPY2Q9Y2B0 182 aa9.49□□□□□ -0.89
VRK2-203ENST00000417641 EDC4Q6P2E9 1401 aaKnown RBP9.48□□□□□ -0.89
VRK2-203ENST00000417641 HSPA4P34932 840 aa9.48□□□□□ -0.89
VRK2-203ENST00000417641 TTC14Q96N46 770 aa9.48□□□□□ -0.89
VRK2-203ENST00000417641 IL25Q9H293 177 aa9.48□□□□□ -0.89
VRK2-203ENST00000417641 DLC1Q96QB1 1528 aa9.48□□□□□ -0.89
VRK2-203ENST00000417641 ALKQ9UM73 1620 aa9.48□□□□□ -0.89
VRK2-203ENST00000417641 CRB1P82279 1406 aa9.48□□□□□ -0.89
VRK2-203ENST00000417641 ZBTB7CA1YPR0 619 aa9.48□□□□□ -0.89
VRK2-203ENST00000417641 ZSCAN22P10073 491 aaPredicted RBP9.48□□□□□ -0.89
VRK2-203ENST00000417641 TSHZ3Q63HK5 1081 aa9.48□□□□□ -0.89
VRK2-203ENST00000417641 PDCL2Q8N4E4 241 aa9.48□□□□□ -0.89
VRK2-203ENST00000417641 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.48□□□□□ -0.89
VRK2-203ENST00000417641 UPF3BQ9BZI7 483 aaKnown RBP9.48□□□□□ -0.89
VRK2-203ENST00000417641 ZRANB1Q9UGI0 708 aa9.48□□□□□ -0.89
VRK2-203ENST00000417641 TPM3P06753 285 aa9.47□□□□□ -0.89
VRK2-203ENST00000417641 FOXD4L6Q3SYB3 417 aaPredicted RBP9.47□□□□□ -0.89
VRK2-203ENST00000417641 FOXD4L3Q6VB84 417 aaPredicted RBP9.47□□□□□ -0.89
VRK2-203ENST00000417641 NME9Q86XW9 330 aa9.47□□□□□ -0.89
VRK2-203ENST00000417641 UNC5CLQ8IV45 518 aa9.47□□□□□ -0.89
VRK2-203ENST00000417641 DIAPH3Q9NSV4 1193 aa9.47□□□□□ -0.89
VRK2-203ENST00000417641 NRKQ7Z2Y5 1582 aa9.47□□□□□ -0.89
VRK2-203ENST00000417641 SYCP1Q15431 976 aa9.46□□□□□ -0.89
VRK2-203ENST00000417641 NOL8Q76FK4 1167 aaKnown RBP9.46□□□□□ -0.89
VRK2-203ENST00000417641 ANO2Q9NQ90 1003 aa9.46□□□□□ -0.89
VRK2-203ENST00000417641 AOX1Q06278 1338 aa9.46□□□□□ -0.89
VRK2-203ENST00000417641 CCT4P50991 539 aaKnown RBP9.46□□□□□ -0.9
VRK2-203ENST00000417641 G2E3Q7L622 706 aa9.46□□□□□ -0.9
VRK2-203ENST00000417641 EXOC6BQ9Y2D4 811 aa9.46□□□□□ -0.9
VRK2-203ENST00000417641 CPS1P31327 1500 aa9.46□□□□□ -0.9
VRK2-203ENST00000417641 MYO5BQ9ULV0 1848 aa9.46□□□□□ -0.9
VRK2-203ENST00000417641 SPDYE4A6NLX3 237 aa9.45□□□□□ -0.9
VRK2-203ENST00000417641 F13A1P00488 732 aa9.45□□□□□ -0.9
VRK2-203ENST00000417641 SYT1P21579 422 aa9.45□□□□□ -0.9
VRK2-203ENST00000417641 U2AF2P26368 475 aaKnown RBP eCLIP9.45□□□□□ -0.93e-7■■■■□ 20.2
VRK2-203ENST00000417641 FEZ1Q99689 392 aa9.45□□□□□ -0.9
VRK2-203ENST00000417641 LRRCC1Q9C099 1032 aa9.45□□□□□ -0.9
VRK2-203ENST00000417641 SLC4A2P04920 1241 aa9.45□□□□□ -0.9
VRK2-203ENST00000417641 ATP8B2P98198 1209 aa9.45□□□□□ -0.9
VRK2-203ENST00000417641 GIMAP6Q6P9H5 292 aa9.45□□□□□ -0.9
VRK2-203ENST00000417641 AEBP1Q8IUX7 1158 aa9.45□□□□□ -0.9
VRK2-203ENST00000417641 ARHGEF10O15013 1369 aa9.44□□□□□ -0.9
VRK2-203ENST00000417641 PNMA6EA0A0J9YXQ4 647 aa9.44□□□□□ -0.9
VRK2-203ENST00000417641 STX6O43752 255 aa9.44□□□□□ -0.9
VRK2-203ENST00000417641 GNAI2P04899 355 aa9.44□□□□□ -0.9
VRK2-203ENST00000417641 NCBP1Q09161 790 aaKnown RBP9.44□□□□□ -0.9
VRK2-203ENST00000417641 SNX14Q9Y5W7 946 aa9.44□□□□□ -0.9
VRK2-203ENST00000417641 PREX1Q8TCU6 1659 aa9.44□□□□□ -0.9
VRK2-203ENST00000417641 F6X3S4 739 aa9.44□□□□□ -0.9
VRK2-203ENST00000417641 RUFY3Q7L099 469 aa9.44□□□□□ -0.9
VRK2-203ENST00000417641 OGFRQ9NZT2 677 aa9.44□□□□□ -0.9
VRK2-203ENST00000417641 TCHHQ07283 1943 aa9.43□□□□□ -0.9
VRK2-203ENST00000417641 RAD50Q92878 1312 aa9.43□□□□□ -0.9
VRK2-203ENST00000417641 AK2P54819 239 aa9.43□□□□□ -0.9
VRK2-203ENST00000417641 RRS1Q15050 365 aaKnown RBP9.43□□□□□ -0.9
VRK2-203ENST00000417641 MCM10Q7L590 875 aa9.43□□□□□ -0.9
VRK2-203ENST00000417641 LSG1Q9H089 658 aaKnown RBP9.43□□□□□ -0.9
VRK2-203ENST00000417641 CTNNA3Q9UI47 895 aa9.43□□□□□ -0.9
VRK2-203ENST00000417641 MTMR6Q9Y217 621 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms