RNA–Protein interactions for RNA: ENST00000417495.7

SP140-204, Transcript of SP140 nuclear body protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SP140, Length 2,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-204ENST00000417495 FAM212AQ96EL1 285 aa10.99□□□□□ -0.65
SP140-204ENST00000417495 RBM47A0AV96 593 aaKnown RBP10.99□□□□□ -0.65
SP140-204ENST00000417495 TERF2IPQ9NYB0 399 aa10.99□□□□□ -0.65
SP140-204ENST00000417495 RAI14Q9P0K7 980 aa10.99□□□□□ -0.65
SP140-204ENST00000417495 TRAK1Q9UPV9 953 aa10.99□□□□□ -0.65
SP140-204ENST00000417495 EDC4Q6P2E9 1401 aaKnown RBP10.99□□□□□ -0.65
SP140-204ENST00000417495 MNX1P50219 401 aaPredicted RBP10.99□□□□□ -0.65
SP140-204ENST00000417495 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.99□□□□□ -0.65
SP140-204ENST00000417495 CGNQ9P2M7 1197 aaKnown RBP10.99□□□□□ -0.65
SP140-204ENST00000417495 EFCC1Q9HA90 598 aa10.98□□□□□ -0.65
SP140-204ENST00000417495 AATKQ6ZMQ8 1374 aa10.98□□□□□ -0.65
SP140-204ENST00000417495 CEP170BQ9Y4F5 1589 aaPredicted RBP10.98□□□□□ -0.65
SP140-204ENST00000417495 FBXO22Q8NEZ5 403 aa10.98□□□□□ -0.65
SP140-204ENST00000417495 ESF1Q9H501 851 aaKnown RBP10.98□□□□□ -0.65
SP140-204ENST00000417495 DYNC1I1O14576 645 aa10.97□□□□□ -0.65
SP140-204ENST00000417495 OFD1O75665 1012 aa10.97□□□□□ -0.65
SP140-204ENST00000417495 MAP2K1Q02750 393 aaPredicted RBP10.97□□□□□ -0.65
SP140-204ENST00000417495 A0A1W2PP64 1363 aa10.97□□□□□ -0.65
SP140-204ENST00000417495 SRPK2P78362 688 aaKnown RBP10.96□□□□□ -0.65
SP140-204ENST00000417495 MAP2K5Q13163 448 aa10.96□□□□□ -0.65
SP140-204ENST00000417495 WDR43Q15061 677 aaKnown RBP eCLIP10.96□□□□□ -0.65
SP140-204ENST00000417495 CASC1Q6TDU7 716 aa10.96□□□□□ -0.66
SP140-204ENST00000417495 OTUD6BQ8N6M0 293 aa10.96□□□□□ -0.66
SP140-204ENST00000417495 ANKARQ7Z5J8 1434 aa10.96□□□□□ -0.66
SP140-204ENST00000417495 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.95□□□□□ -0.66
SP140-204ENST00000417495 DPYSL4O14531 572 aa10.95□□□□□ -0.66
SP140-204ENST00000417495 TAGLNQ01995 201 aaKnown RBP10.95□□□□□ -0.66
SP140-204ENST00000417495 ZNF500O60304 480 aaPredicted RBP10.95□□□□□ -0.66
SP140-204ENST00000417495 PRR29P0C7W0 189 aa10.95□□□□□ -0.66
SP140-204ENST00000417495 TMEM132EQ6IEE7 984 aa10.95□□□□□ -0.66
SP140-204ENST00000417495 TBX22Q9Y458 520 aa10.95□□□□□ -0.66
SP140-204ENST00000417495 CDK12Q9NYV4 1490 aaPredicted RBP10.94□□□□□ -0.66
SP140-204ENST00000417495 GOLIM4O00461 696 aa10.94□□□□□ -0.66
SP140-204ENST00000417495 XRCC6P12956 609 aaKnown RBP eCLIP10.94□□□□□ -0.66
SP140-204ENST00000417495 ZNF16P17020 682 aaPredicted RBP10.94□□□□□ -0.66
SP140-204ENST00000417495 NBPF10Q6P3W6 841 aaKnown RBP10.94□□□□□ -0.66
SP140-204ENST00000417495 CFAP53Q96M91 514 aa10.94□□□□□ -0.66
SP140-204ENST00000417495 PCDHB8Q9UN66 801 aa10.94□□□□□ -0.66
SP140-204ENST00000417495 PHF8Q9UPP1 1060 aa10.94□□□□□ -0.66
SP140-204ENST00000417495 PCDHB13Q9Y5F0 798 aa10.94□□□□□ -0.66
SP140-204ENST00000417495 FSD2A1L4K1 749 aa10.94□□□□□ -0.66
SP140-204ENST00000417495 FOSBP53539 338 aa10.94□□□□□ -0.66
SP140-204ENST00000417495 ADAMTS8Q9UP79 889 aa10.94□□□□□ -0.66
SP140-204ENST00000417495 CEP83Q9Y592 693 aa10.94□□□□□ -0.66
SP140-204ENST00000417495 NWD1Q149M9 1564 aa10.94□□□□□ -0.66
SP140-204ENST00000417495 CHD2O14647 1828 aaKnown RBP10.93□□□□□ -0.66
SP140-204ENST00000417495 CAMK2BQ13554 666 aa10.93□□□□□ -0.66
SP140-204ENST00000417495 HDGFL2Q7Z4V5 671 aaPredicted RBP10.93□□□□□ -0.66
SP140-204ENST00000417495 PRAM1Q96QH2 718 aa10.93□□□□□ -0.66
SP140-204ENST00000417495 BSDC1Q9NW68 430 aaPredicted RBP10.93□□□□□ -0.66
SP140-204ENST00000417495 FMN2Q9NZ56 1722 aa10.93□□□□□ -0.66
SP140-204ENST00000417495 FRAT2O75474 233 aaPredicted RBP10.93□□□□□ -0.66
SP140-204ENST00000417495 SSR1P43307 286 aaKnown RBP10.93□□□□□ -0.66
SP140-204ENST00000417495 DNAJC14Q6Y2X3 702 aaPredicted RBP10.93□□□□□ -0.66
SP140-204ENST00000417495 MORC1Q86VD1 984 aa10.93□□□□□ -0.66
SP140-204ENST00000417495 DDX27Q96GQ7 796 aaKnown RBP10.93□□□□□ -0.66
SP140-204ENST00000417495 METP08581 1390 aa10.93□□□□□ -0.66
SP140-204ENST00000417495 CHMP4CQ96CF2 233 aa10.92□□□□□ -0.66
SP140-204ENST00000417495 NKTRP30414 1462 aaKnown RBP10.92□□□□□ -0.66
SP140-204ENST00000417495 MINK1Q8N4C8 1332 aaPredicted RBP10.92□□□□□ -0.66
SP140-204ENST00000417495 MARCH6O60337 910 aa10.92□□□□□ -0.66
SP140-204ENST00000417495 TCF3P15923 654 aa10.92□□□□□ -0.66
SP140-204ENST00000417495 MTMR14Q8NCE2 650 aa10.92□□□□□ -0.66
SP140-204ENST00000417495 SLC12A5Q9H2X9 1139 aa10.92□□□□□ -0.66
SP140-204ENST00000417495 WASLO00401 505 aaPredicted RBP10.91□□□□□ -0.66
SP140-204ENST00000417495 CT47B1P0C2W7 299 aaPredicted RBP10.91□□□□□ -0.66
SP140-204ENST00000417495 RRP1P56182 461 aaKnown RBP10.91□□□□□ -0.66
SP140-204ENST00000417495 WDR63Q8IWG1 891 aa10.91□□□□□ -0.66
SP140-204ENST00000417495 PBXIP1Q96AQ6 731 aa10.91□□□□□ -0.66
SP140-204ENST00000417495 CRISPLD2Q9H0B8 497 aa10.91□□□□□ -0.66
SP140-204ENST00000417495 PLEKHH1Q9ULM0 1364 aa10.91□□□□□ -0.66
SP140-204ENST00000417495 SETD1BQ9UPS6 1966 aaKnown RBP10.91□□□□□ -0.66
SP140-204ENST00000417495 TMEM88BA6NKF7 163 aa10.91□□□□□ -0.66
SP140-204ENST00000417495 SLFN5Q08AF3 891 aa10.91□□□□□ -0.66
SP140-204ENST00000417495 MFSD10Q14728 455 aa10.91□□□□□ -0.66
SP140-204ENST00000417495 MYCBPQ99417 103 aaPredicted RBP10.91□□□□□ -0.66
SP140-204ENST00000417495 EMILIN3Q9NT22 766 aa10.91□□□□□ -0.66
SP140-204ENST00000417495 POGKQ9P215 609 aa10.91□□□□□ -0.66
SP140-204ENST00000417495 SSH2Q76I76 1423 aa10.91□□□□□ -0.66
SP140-204ENST00000417495 IL16Q14005 1332 aa10.91□□□□□ -0.66
SP140-204ENST00000417495 CAPN15O75808 1086 aa10.91□□□□□ -0.66
SP140-204ENST00000417495 KCNJ4P48050 445 aa10.91□□□□□ -0.66
SP140-204ENST00000417495 NBPF6Q5VWK0 638 aa10.91□□□□□ -0.66
SP140-204ENST00000417495 NBPF5PQ86XG9 351 aaPredicted RBP10.91□□□□□ -0.66
SP140-204ENST00000417495 NLRP7Q8WX94 980 aa10.91□□□□□ -0.66
SP140-204ENST00000417495 RUNDC1Q96C34 613 aa10.91□□□□□ -0.66
SP140-204ENST00000417495 NBPF4Q96M43 638 aa10.91□□□□□ -0.66
SP140-204ENST00000417495 CDK19Q9BWU1 502 aa10.91□□□□□ -0.66
SP140-204ENST00000417495 RBM28Q9NW13 759 aaKnown RBP10.91□□□□□ -0.66
SP140-204ENST00000417495 RCAN3Q9UKA8 241 aa10.91□□□□□ -0.66
SP140-204ENST00000417495 LOC102724159A0A0B4J2E5 919 aa10.9□□□□□ -0.66
SP140-204ENST00000417495 ANKRD62A6NC57 917 aa10.9□□□□□ -0.66
SP140-204ENST00000417495 PWP2Q15269 919 aaKnown RBP10.9□□□□□ -0.66
SP140-204ENST00000417495 CCDC66A2RUB6 948 aa10.9□□□□□ -0.67
SP140-204ENST00000417495 TULP2O00295 520 aa10.9□□□□□ -0.67
SP140-204ENST00000417495 TBC1D12O60347 775 aa10.9□□□□□ -0.67
SP140-204ENST00000417495 GOLGA2Q08379 1002 aa10.9□□□□□ -0.67
SP140-204ENST00000417495 SH3D19Q5HYK7 790 aa10.9□□□□□ -0.67
SP140-204ENST00000417495 THEMISQ8N1K5 641 aaPredicted RBP10.9□□□□□ -0.67
SP140-204ENST00000417495 ISY1Q9ULR0 285 aaKnown RBP10.9□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms