RNA–Protein interactions for RNA: ENST00000417033.1

MDC1-203, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-203ENST00000417033 IL17REQ8NFR9 667 aa10.62□□□□□ -0.71
MDC1-203ENST00000417033 CDCA7Q9BWT1 371 aaPredicted RBP10.62□□□□□ -0.71
MDC1-203ENST00000417033 PLEKHG2Q9H7P9 1386 aa10.62□□□□□ -0.71
MDC1-203ENST00000417033 ZNF521Q96K83 1311 aa10.61□□□□□ -0.71
MDC1-203ENST00000417033 BRWD3Q6RI45 1802 aa10.61□□□□□ -0.71
MDC1-203ENST00000417033 GNAT3A8MTJ3 354 aa10.61□□□□□ -0.71
MDC1-203ENST00000417033 RNMTO43148 476 aaKnown RBP10.61□□□□□ -0.71
MDC1-203ENST00000417033 C1orf141Q5JVX7 400 aa10.61□□□□□ -0.71
MDC1-203ENST00000417033 WWC1Q8IX03 1113 aa10.61□□□□□ -0.71
MDC1-203ENST00000417033 IFNL2Q8IZJ0 200 aa10.61□□□□□ -0.71
MDC1-203ENST00000417033 ADAMTS7Q9UKP4 1686 aa10.6□□□□□ -0.71
MDC1-203ENST00000417033 SPDYE1Q8NFV5 336 aaPredicted RBP10.6□□□□□ -0.71
MDC1-203ENST00000417033 NKX1-1Q15270 411 aaPredicted RBP10.59□□□□□ -0.71
MDC1-203ENST00000417033 PTF1AQ7RTS3 328 aa10.59□□□□□ -0.71
MDC1-203ENST00000417033 CDCA7LQ96GN5 454 aa10.59□□□□□ -0.71
MDC1-203ENST00000417033 ACSBG1Q96GR2 724 aa10.59□□□□□ -0.71
MDC1-203ENST00000417033 CEMIPQ8WUJ3 1361 aa10.59□□□□□ -0.71
MDC1-203ENST00000417033 ZBED9Q6R2W3 1325 aa10.58□□□□□ -0.71
MDC1-203ENST00000417033 DOT1LQ8TEK3 1739 aa10.58□□□□□ -0.72
MDC1-203ENST00000417033 MRC1P22897 1456 aa10.58□□□□□ -0.72
MDC1-203ENST00000417033 PDE3BQ13370 1112 aa10.58□□□□□ -0.72
MDC1-203ENST00000417033 CCDC27Q2M243 656 aa10.58□□□□□ -0.72
MDC1-203ENST00000417033 REM2Q8IYK8 340 aaPredicted RBP10.58□□□□□ -0.72
MDC1-203ENST00000417033 RTF1Q92541 710 aaKnown RBP10.58□□□□□ -0.72
MDC1-203ENST00000417033 SCN11AQ9UI33 1791 aa10.57□□□□□ -0.72
MDC1-203ENST00000417033 LMOD3Q0VAK6 560 aa10.57□□□□□ -0.72
MDC1-203ENST00000417033 KRT27Q7Z3Y8 459 aa10.57□□□□□ -0.72
MDC1-203ENST00000417033 DCAF5Q96JK2 942 aa10.57□□□□□ -0.72
MDC1-203ENST00000417033 MIS18AQ9NYP9 233 aa10.57□□□□□ -0.72
MDC1-203ENST00000417033 VIRMAQ69YN4 1812 aaKnown RBP10.56□□□□□ -0.72
MDC1-203ENST00000417033 KCNQ3O43525 872 aa10.56□□□□□ -0.72
MDC1-203ENST00000417033 KCNQ2O43526 872 aa10.56□□□□□ -0.72
MDC1-203ENST00000417033 HTATSF1O43719 755 aaKnown RBP10.56□□□□□ -0.72
MDC1-203ENST00000417033 TSR2Q969E8 191 aaKnown RBP10.56□□□□□ -0.72
MDC1-203ENST00000417033 LAS1LQ9Y4W2 734 aaKnown RBP10.56□□□□□ -0.72
MDC1-203ENST00000417033 HSP90AB1P08238 724 aaKnown RBP10.55□□□□□ -0.72
MDC1-203ENST00000417033 PRIM1P49642 420 aaKnown RBP10.55□□□□□ -0.72
MDC1-203ENST00000417033 SLC39A6Q13433 755 aa10.55□□□□□ -0.72
MDC1-203ENST00000417033 SLC52A2Q9HAB3 445 aa10.55□□□□□ -0.72
MDC1-203ENST00000417033 SIPA1L3O60292 1781 aaPredicted RBP10.54□□□□□ -0.72
MDC1-203ENST00000417033 ZNF853P0CG23 659 aa10.54□□□□□ -0.72
MDC1-203ENST00000417033 CABP4P57796 275 aa10.54□□□□□ -0.72
MDC1-203ENST00000417033 GOLGA2Q08379 1002 aa10.54□□□□□ -0.72
MDC1-203ENST00000417033 SLFN5Q08AF3 891 aa10.54□□□□□ -0.72
MDC1-203ENST00000417033 TEFQ10587 303 aa10.54□□□□□ -0.72
MDC1-203ENST00000417033 KRT24Q2M2I5 525 aa10.54□□□□□ -0.72
MDC1-203ENST00000417033 WDR63Q8IWG1 891 aa10.54□□□□□ -0.72
MDC1-203ENST00000417033 NGEFQ8N5V2 710 aa10.54□□□□□ -0.72
MDC1-203ENST00000417033 NFATC2IPQ8NCF5 419 aa10.54□□□□□ -0.72
MDC1-203ENST00000417033 PIGBQ92521 554 aa10.54□□□□□ -0.72
MDC1-203ENST00000417033 SYTL4Q96C24 671 aaPredicted RBP10.54□□□□□ -0.72
MDC1-203ENST00000417033 MBIPQ9NS73 344 aa10.54□□□□□ -0.72
MDC1-203ENST00000417033 FANCIQ9NVI1 1328 aa10.54□□□□□ -0.72
MDC1-203ENST00000417033 ITGB4P16144 1822 aa10.54□□□□□ -0.72
MDC1-203ENST00000417033 BCL9O00512 1426 aa10.53□□□□□ -0.72
MDC1-203ENST00000417033 ERVV-2B6SEH9 535 aa10.52□□□□□ -0.73
MDC1-203ENST00000417033 CHL1O00533 1208 aa10.52□□□□□ -0.73
MDC1-203ENST00000417033 TAF7Q15545 349 aaPredicted RBP10.52□□□□□ -0.73
MDC1-203ENST00000417033 DUSP27Q5VZP5 1158 aa10.52□□□□□ -0.73
MDC1-203ENST00000417033 IFT57Q9NWB7 429 aa10.52□□□□□ -0.73
MDC1-203ENST00000417033 TMOD3Q9NYL9 352 aa10.52□□□□□ -0.73
MDC1-203ENST00000417033 TSPYL4Q9UJ04 414 aa10.52□□□□□ -0.73
MDC1-203ENST00000417033 ASAP1Q9ULH1 1129 aa10.52□□□□□ -0.73
MDC1-203ENST00000417033 NHSQ6T4R5 1651 aa10.52□□□□□ -0.73
MDC1-203ENST00000417033 IL16Q14005 1332 aa10.52□□□□□ -0.73
MDC1-203ENST00000417033 KDM3BQ7LBC6 1761 aa10.52□□□□□ -0.73
MDC1-203ENST00000417033 PAPPAQ13219 1627 aa10.51□□□□□ -0.73
MDC1-203ENST00000417033 KAT6BQ8WYB5 2073 aa10.51□□□□□ -0.73
MDC1-203ENST00000417033 BTBD11A6QL63 1104 aa10.51□□□□□ -0.73
MDC1-203ENST00000417033 TRIM37O94972 964 aa10.51□□□□□ -0.73
MDC1-203ENST00000417033 TRMT2AQ8IZ69 625 aaKnown RBP10.51□□□□□ -0.73
MDC1-203ENST00000417033 CFAP44Q96MT7 982 aa10.51□□□□□ -0.73
MDC1-203ENST00000417033 ATG3Q9NT62 314 aa10.51□□□□□ -0.73
MDC1-203ENST00000417033 KCPQ6ZWJ8 1503 aa10.51□□□□□ -0.73
MDC1-203ENST00000417033 SBF2Q86WG5 1849 aa10.51□□□□□ -0.73
MDC1-203ENST00000417033 PRAMEF22A3QJZ6 481 aa10.5□□□□□ -0.73
MDC1-203ENST00000417033 E9PSI1 815 aa10.5□□□□□ -0.73
MDC1-203ENST00000417033 GNAI1P63096 354 aa10.5□□□□□ -0.73
MDC1-203ENST00000417033 CALD1Q05682 793 aaKnown RBP10.5□□□□□ -0.73
MDC1-203ENST00000417033 FAM196AQ6ZSG2 479 aa10.5□□□□□ -0.73
MDC1-203ENST00000417033 TSPYL6Q8N831 410 aa10.5□□□□□ -0.73
MDC1-203ENST00000417033 BTAF1O14981 1849 aa10.49□□□□□ -0.73
MDC1-203ENST00000417033 EIF4A1P60842 406 aaKnown RBP10.49□□□□□ -0.73
MDC1-203ENST00000417033 EXOSC9Q06265 439 aaKnown RBP10.49□□□□□ -0.73
MDC1-203ENST00000417033 ZNF790Q6PG37 636 aa10.49□□□□□ -0.73
MDC1-203ENST00000417033 PLCD3Q8N3E9 789 aa10.49□□□□□ -0.73
MDC1-203ENST00000417033 C8orf58Q8NAV2 365 aa10.49□□□□□ -0.73
MDC1-203ENST00000417033 ZNF496Q96IT1 587 aaPredicted RBP10.49□□□□□ -0.73
MDC1-203ENST00000417033 CLEC11AQ9Y240 323 aa10.49□□□□□ -0.73
MDC1-203ENST00000417033 ELL2O00472 640 aaPredicted RBP10.48□□□□□ -0.73
MDC1-203ENST00000417033 PTCD1O75127 700 aaKnown RBP10.48□□□□□ -0.73
MDC1-203ENST00000417033 KCNQ4P56696 695 aa10.48□□□□□ -0.73
MDC1-203ENST00000417033 SLC4A9Q96Q91 983 aa10.48□□□□□ -0.73
MDC1-203ENST00000417033 MYH16Q9H6N6 1097 aa10.48□□□□□ -0.73
MDC1-203ENST00000417033 PALLDQ8WX93 1383 aa10.48□□□□□ -0.73
MDC1-203ENST00000417033 TNS1Q9HBL0 1735 aaKnown RBP10.47□□□□□ -0.73
MDC1-203ENST00000417033 UBR2Q8IWV8 1755 aa10.47□□□□□ -0.73
MDC1-203ENST00000417033 PITPNM1O00562 1244 aa10.47□□□□□ -0.73
MDC1-203ENST00000417033 BCL11BQ9C0K0 894 aaPredicted RBP10.47□□□□□ -0.73
MDC1-203ENST00000417033 C5P01031 1676 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms