RNA–Protein interactions for RNA: ENST00000415920.5

CPNE1-209, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-209ENST00000415920 CCDC184Q52MB2 194 aa18.19■□□□□ 0.5
CPNE1-209ENST00000415920 PIGBQ92521 554 aa18.19■□□□□ 0.5
CPNE1-209ENST00000415920 U2SURPO15042 1029 aaKnown RBP18.18■□□□□ 0.5
CPNE1-209ENST00000415920 GIGYF1O75420 1035 aaPredicted RBP18.17■□□□□ 0.5
CPNE1-209ENST00000415920 PHF14O94880 888 aa18.17■□□□□ 0.5
CPNE1-209ENST00000415920 WWC3Q9ULE0 1092 aa18.17■□□□□ 0.5
CPNE1-209ENST00000415920 DLG5Q8TDM6 1919 aa18.17■□□□□ 0.5
CPNE1-209ENST00000415920 NKX1-1Q15270 411 aaPredicted RBP18.16■□□□□ 0.5
CPNE1-209ENST00000415920 LINC00116Q8NCU8 138 aa18.16■□□□□ 0.5
CPNE1-209ENST00000415920 EYA1Q99502 592 aa18.16■□□□□ 0.5
CPNE1-209ENST00000415920 CCER2I3L3R5 266 aa18.15■□□□□ 0.5
CPNE1-209ENST00000415920 IL13P35225 146 aa18.15■□□□□ 0.5
CPNE1-209ENST00000415920 WDR43Q15061 677 aaKnown RBP eCLIP18.15■□□□□ 0.5
CPNE1-209ENST00000415920 AK7Q96M32 723 aa18.15■□□□□ 0.5
CPNE1-209ENST00000415920 NUDCQ9Y266 331 aa18.15■□□□□ 0.5
CPNE1-209ENST00000415920 ATP10DQ9P241 1426 aa18.15■□□□□ 0.5
CPNE1-209ENST00000415920 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.14■□□□□ 0.49
CPNE1-209ENST00000415920 GRIN3BO60391 1043 aa18.14■□□□□ 0.49
CPNE1-209ENST00000415920 ITPK1Q13572 414 aa18.14■□□□□ 0.49
CPNE1-209ENST00000415920 CD2APQ9Y5K6 639 aa18.14■□□□□ 0.49
CPNE1-209ENST00000415920 IGSF1Q8N6C5 1336 aa18.14■□□□□ 0.49
CPNE1-209ENST00000415920 FLAD1Q8NFF5 587 aa18.13■□□□□ 0.49
CPNE1-209ENST00000415920 SMARCC1Q92922 1105 aaPredicted RBP18.13■□□□□ 0.49
CPNE1-209ENST00000415920 ASAP1Q9ULH1 1129 aa18.13■□□□□ 0.49
CPNE1-209ENST00000415920 LOC102724428A0A0B4J2F2 783 aa18.12■□□□□ 0.49
CPNE1-209ENST00000415920 U2AF1L5P0DN76 240 aaPredicted RBP18.12■□□□□ 0.49
CPNE1-209ENST00000415920 SIK1P57059 783 aa18.12■□□□□ 0.49
CPNE1-209ENST00000415920 U2AF1Q01081 240 aaKnown RBP eCLIP18.12■□□□□ 0.494e-24■■□□□ 12.7
CPNE1-209ENST00000415920 HMOX1P09601 288 aa18.11■□□□□ 0.49
CPNE1-209ENST00000415920 SPG7Q9UQ90 795 aa18.11■□□□□ 0.49
CPNE1-209ENST00000415920 ADCY9O60503 1353 aa18.1■□□□□ 0.49
CPNE1-209ENST00000415920 PHKG2P15735 406 aa18.1■□□□□ 0.49
CPNE1-209ENST00000415920 AEBP1Q8IUX7 1158 aa18.1■□□□□ 0.49
CPNE1-209ENST00000415920 TMOD3Q9NYL9 352 aa18.1■□□□□ 0.49
CPNE1-209ENST00000415920 KDRP35968 1356 aa18.09■□□□□ 0.49
CPNE1-209ENST00000415920 SULT6B1Q6IMI4 303 aa18.09■□□□□ 0.49
CPNE1-209ENST00000415920 ATG3Q9NT62 314 aa18.09■□□□□ 0.49
CPNE1-209ENST00000415920 GNPATO15228 680 aa18.08■□□□□ 0.48
CPNE1-209ENST00000415920 SSFA2P28290 1259 aa18.08■□□□□ 0.48
CPNE1-209ENST00000415920 FAM9BQ8IZU0 186 aa18.08■□□□□ 0.48
CPNE1-209ENST00000415920 KIAA1551Q9HCM1 1747 aa18.08■□□□□ 0.48
CPNE1-209ENST00000415920 ATP6V1AP38606 617 aa18.07■□□□□ 0.48
CPNE1-209ENST00000415920 ZNF526Q8TF50 670 aaPredicted RBP18.07■□□□□ 0.48
CPNE1-209ENST00000415920 SLC4A9Q96Q91 983 aa18.07■□□□□ 0.48
CPNE1-209ENST00000415920 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.07■□□□□ 0.48
CPNE1-209ENST00000415920 IFNL2Q8IZJ0 200 aa18.06■□□□□ 0.48
CPNE1-209ENST00000415920 COL5A3P25940 1745 aaPredicted RBP18.05■□□□□ 0.48
CPNE1-209ENST00000415920 N4BP2Q86UW6 1770 aaPredicted RBP18.04■□□□□ 0.48
CPNE1-209ENST00000415920 PRKAR2BP31323 418 aa18.04■□□□□ 0.48
CPNE1-209ENST00000415920 PNISRQ8TF01 805 aaKnown RBP18.04■□□□□ 0.48
CPNE1-209ENST00000415920 RSPH6AQ9H0K4 717 aa18.04■□□□□ 0.48
CPNE1-209ENST00000415920 KIF13BQ9NQT8 1826 aa18.04■□□□□ 0.48
CPNE1-209ENST00000415920 KDM6AO15550 1401 aaPredicted RBP18.04■□□□□ 0.48
CPNE1-209ENST00000415920 SCN11AQ9UI33 1791 aa18.04■□□□□ 0.48
CPNE1-209ENST00000415920 MAPK8IP3Q9UPT6 1336 aa18.03■□□□□ 0.48
CPNE1-209ENST00000415920 PXDNLA1KZ92 1463 aa18.03■□□□□ 0.48
CPNE1-209ENST00000415920 CICQ96RK0 1608 aaPredicted RBP18.03■□□□□ 0.48
CPNE1-209ENST00000415920 MMP10P09238 476 aa18.03■□□□□ 0.48
CPNE1-209ENST00000415920 CCDC146Q8IYE0 955 aa18.03■□□□□ 0.48
CPNE1-209ENST00000415920 ADAMTS8Q9UP79 889 aa18.03■□□□□ 0.48
CPNE1-209ENST00000415920 GPBP1L1Q9HC44 474 aaPredicted RBP18.02■□□□□ 0.48
CPNE1-209ENST00000415920 MYH14Q7Z406 1995 aaKnown RBP18.01■□□□□ 0.47
CPNE1-209ENST00000415920 NEFMP07197 916 aa18.01■□□□□ 0.47
CPNE1-209ENST00000415920 HMGB2P26583 209 aaKnown RBP18.01■□□□□ 0.47
CPNE1-209ENST00000415920 ZNF831Q5JPB2 1677 aa18.01■□□□□ 0.47
CPNE1-209ENST00000415920 C4AP0C0L4 1744 aa18.01■□□□□ 0.47
CPNE1-209ENST00000415920 FCHSD2O94868 740 aa18■□□□□ 0.47
CPNE1-209ENST00000415920 RBM42Q9BTD8 480 aaKnown RBP18■□□□□ 0.47
CPNE1-209ENST00000415920 PLEKHG2Q9H7P9 1386 aa18■□□□□ 0.47
CPNE1-209ENST00000415920 CEP350Q5VT06 3117 aa18■□□□□ 0.47
CPNE1-209ENST00000415920 PNNQ9H307 717 aaKnown RBP17.99■□□□□ 0.47
CPNE1-209ENST00000415920 C10orf71Q711Q0 1435 aa17.98■□□□□ 0.47
CPNE1-209ENST00000415920 ADAMTS7Q9UKP4 1686 aa17.97■□□□□ 0.47
CPNE1-209ENST00000415920 TRAPPC3LQ5T215 181 aa17.97■□□□□ 0.47
CPNE1-209ENST00000415920 ZNF530Q6P9A1 599 aaPredicted RBP17.97■□□□□ 0.47
CPNE1-209ENST00000415920 ARHGEF1Q92888 912 aaKnown RBP17.97■□□□□ 0.47
CPNE1-209ENST00000415920 RTCBQ9Y3I0 505 aaKnown RBP17.97■□□□□ 0.47
CPNE1-209ENST00000415920 BRCA1P38398 1863 aaKnown RBP17.97■□□□□ 0.47
CPNE1-209ENST00000415920 SIPA1L3O60292 1781 aaPredicted RBP17.96■□□□□ 0.47
CPNE1-209ENST00000415920 TJP1Q07157 1748 aa17.96■□□□□ 0.47
CPNE1-209ENST00000415920 A0A0G2JLW4 131 aa17.96■□□□□ 0.47
CPNE1-209ENST00000415920 ERVV-2B6SEH9 535 aa17.96■□□□□ 0.47
CPNE1-209ENST00000415920 KIF3CO14782 793 aa17.96■□□□□ 0.47
CPNE1-209ENST00000415920 RUNDC1Q96C34 613 aa17.96■□□□□ 0.47
CPNE1-209ENST00000415920 DCAF5Q96JK2 942 aa17.96■□□□□ 0.47
CPNE1-209ENST00000415920 GYS1P13807 737 aa17.95■□□□□ 0.46
CPNE1-209ENST00000415920 PLEKHF1Q96S99 279 aa17.95■□□□□ 0.46
CPNE1-209ENST00000415920 CNTNAP4Q9C0A0 1308 aa17.95■□□□□ 0.46
CPNE1-209ENST00000415920 PLEKHO1Q53GL0 409 aaPredicted RBP17.94■□□□□ 0.46
CPNE1-209ENST00000415920 PHACTR3Q96KR7 559 aa17.94■□□□□ 0.46
CPNE1-209ENST00000415920 BCS1LQ9Y276 419 aa17.94■□□□□ 0.46
CPNE1-209ENST00000415920 PTCD1O75127 700 aaKnown RBP17.93■□□□□ 0.46
CPNE1-209ENST00000415920 DPEP1P16444 411 aa17.93■□□□□ 0.46
CPNE1-209ENST00000415920 HSPA6P17066 643 aa17.93■□□□□ 0.46
CPNE1-209ENST00000415920 CABP4P57796 275 aa17.93■□□□□ 0.46
CPNE1-209ENST00000415920 AMOTQ4VCS5 1084 aa17.93■□□□□ 0.46
CPNE1-209ENST00000415920 RC3H1Q5TC82 1133 aaKnown RBP17.93■□□□□ 0.46
CPNE1-209ENST00000415920 GAS2L2Q8NHY3 880 aa17.93■□□□□ 0.46
CPNE1-209ENST00000415920 SRP68Q9UHB9 627 aaKnown RBP17.93■□□□□ 0.46
CPNE1-209ENST00000415920 RPS6KA4O75676 772 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms