RNA–Protein interactions for RNA: ENST00000415609.6

UBA3-203, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 5 BASIC

Gene UBA3, Length 2,004 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-203ENST00000415609 LRRC59Q96AG4 307 aaKnown RBP15.31■□□□□ 0.04
UBA3-203ENST00000415609 KIF2CQ99661 725 aa15.31■□□□□ 0.04
UBA3-203ENST00000415609 CACNA1FO60840 1977 aa15.3■□□□□ 0.04
UBA3-203ENST00000415609 HSP90AB1P08238 724 aaKnown RBP15.3■□□□□ 0.04
UBA3-203ENST00000415609 PXDNLA1KZ92 1463 aa15.29■□□□□ 0.04
UBA3-203ENST00000415609 N4BP2Q86UW6 1770 aaPredicted RBP15.29■□□□□ 0.04
UBA3-203ENST00000415609 MED1Q15648 1581 aaPredicted RBP15.29■□□□□ 0.04
UBA3-203ENST00000415609 NCOA3Q9Y6Q9 1424 aa15.29■□□□□ 0.04
UBA3-203ENST00000415609 SDSP20132 328 aa15.29■□□□□ 0.04
UBA3-203ENST00000415609 ZNF530Q6P9A1 599 aaPredicted RBP15.29■□□□□ 0.04
UBA3-203ENST00000415609 CASC1Q6TDU7 716 aa15.29■□□□□ 0.04
UBA3-203ENST00000415609 SLIT3O75094 1523 aa15.28■□□□□ 0.04
UBA3-203ENST00000415609 GCP02774 474 aa15.28■□□□□ 0.04
UBA3-203ENST00000415609 LGR6Q9HBX8 967 aa15.28■□□□□ 0.04
UBA3-203ENST00000415609 EXOC6BQ9Y2D4 811 aa15.28■□□□□ 0.04
UBA3-203ENST00000415609 LMO7Q8WWI1 1683 aa15.28■□□□□ 0.04
UBA3-203ENST00000415609 KDM3BQ7LBC6 1761 aa15.27■□□□□ 0.03
UBA3-203ENST00000415609 TEFQ10587 303 aa15.27■□□□□ 0.03
UBA3-203ENST00000415609 PLEKHO1Q53GL0 409 aaPredicted RBP15.27■□□□□ 0.03
UBA3-203ENST00000415609 EIF2S2P20042 333 aaKnown RBP15.26■□□□□ 0.03
UBA3-203ENST00000415609 EIF4A1P60842 406 aaKnown RBP15.26■□□□□ 0.03
UBA3-203ENST00000415609 AKAP4Q5JQC9 854 aa15.26■□□□□ 0.03
UBA3-203ENST00000415609 ARHGEF25Q86VW2 580 aa15.26■□□□□ 0.03
UBA3-203ENST00000415609 PROSER2Q86WR7 435 aaPredicted RBP15.26■□□□□ 0.03
UBA3-203ENST00000415609 PHAXQ9H814 394 aaKnown RBP15.26■□□□□ 0.03
UBA3-203ENST00000415609 LRRFIP2Q9Y608 721 aaKnown RBP15.26■□□□□ 0.03
UBA3-203ENST00000415609 HSP90AA1P07900 732 aaKnown RBP15.26■□□□□ 0.03
UBA3-203ENST00000415609 RBM42Q9BTD8 480 aaKnown RBP15.26■□□□□ 0.03
UBA3-203ENST00000415609 TRPM3Q9HCF6 1732 aaPredicted RBP15.25■□□□□ 0.03
UBA3-203ENST00000415609 PNMA6EA0A0J9YXQ4 647 aa15.25■□□□□ 0.03
UBA3-203ENST00000415609 CD2BP2O95400 341 aaKnown RBP15.25■□□□□ 0.03
UBA3-203ENST00000415609 UBTFL1P0CB47 393 aaPredicted RBP15.25■□□□□ 0.03
UBA3-203ENST00000415609 MCM4P33991 863 aa15.25■□□□□ 0.03
UBA3-203ENST00000415609 ATP8B2P98198 1209 aa15.25■□□□□ 0.03
UBA3-203ENST00000415609 MPRIPQ6WCQ1 1025 aa15.25■□□□□ 0.03
UBA3-203ENST00000415609 ANKRD24Q8TF21 1146 aa15.25■□□□□ 0.03
UBA3-203ENST00000415609 LRRCC1Q9C099 1032 aa15.25■□□□□ 0.03
UBA3-203ENST00000415609 BTBD11A6QL63 1104 aa15.24■□□□□ 0.03
UBA3-203ENST00000415609 K7ELQ4 463 aaPredicted RBP15.24■□□□□ 0.03
UBA3-203ENST00000415609 PDE1AP54750 535 aa15.24■□□□□ 0.03
UBA3-203ENST00000415609 AMOTQ4VCS5 1084 aa15.24■□□□□ 0.03
UBA3-203ENST00000415609 C1orf141Q5JVX7 400 aa15.24■□□□□ 0.03
UBA3-203ENST00000415609 KRT28Q7Z3Y7 464 aa15.24■□□□□ 0.03
UBA3-203ENST00000415609 KIF1AQ12756 1690 aa15.24■□□□□ 0.03
UBA3-203ENST00000415609 PXDNQ92626 1479 aa15.24■□□□□ 0.03
UBA3-203ENST00000415609 HOXB7P09629 217 aa15.24■□□□□ 0.03
UBA3-203ENST00000415609 OSBPL3Q9H4L5 887 aa15.24■□□□□ 0.03
UBA3-203ENST00000415609 NCAPD2Q15021 1401 aa15.23■□□□□ 0.03
UBA3-203ENST00000415609 KCNQ3O43525 872 aa15.23■□□□□ 0.03
UBA3-203ENST00000415609 DDIT3P35638 169 aa15.23■□□□□ 0.03
UBA3-203ENST00000415609 USP26Q9BXU7 913 aa15.23■□□□□ 0.03
UBA3-203ENST00000415609 CHMP4AQ9BY43 222 aa15.23■□□□□ 0.03
UBA3-203ENST00000415609 USP44Q9H0E7 712 aa15.23■□□□□ 0.03
UBA3-203ENST00000415609 CHPF2Q9P2E5 772 aa15.23■□□□□ 0.03
UBA3-203ENST00000415609 SRCIN1Q9C0H9 1055 aa15.22■□□□□ 0.03
UBA3-203ENST00000415609 C1orf167Q5SNV9 1468 aa15.22■□□□□ 0.03
UBA3-203ENST00000415609 IBTKQ9P2D0 1353 aaPredicted RBP15.22■□□□□ 0.03
UBA3-203ENST00000415609 RABEP1Q15276 862 aa15.22■□□□□ 0.03
UBA3-203ENST00000415609 FOXD4L1Q9NU39 408 aa15.22■□□□□ 0.03
UBA3-203ENST00000415609 RNMTO43148 476 aaKnown RBP15.21■□□□□ 0.03
UBA3-203ENST00000415609 REC8O95072 547 aa15.21■□□□□ 0.03
UBA3-203ENST00000415609 TSHZ3Q63HK5 1081 aa15.21■□□□□ 0.03
UBA3-203ENST00000415609 CIZ1Q9ULV3 898 aaPredicted RBP15.21■□□□□ 0.03
UBA3-203ENST00000415609 CAMTA1Q9Y6Y1 1673 aa15.21■□□□□ 0.02
UBA3-203ENST00000415609 MX1P20591 662 aa15.21■□□□□ 0.02
UBA3-203ENST00000415609 OVOS2A0A0G2JMS6 1433 aa15.2■□□□□ 0.02
UBA3-203ENST00000415609 ERC2O15083 957 aa15.2■□□□□ 0.02
UBA3-203ENST00000415609 C19orf44Q9H6X5 657 aa15.2■□□□□ 0.02
UBA3-203ENST00000415609 AXIN2Q9Y2T1 843 aa15.2■□□□□ 0.02
UBA3-203ENST00000415609 SALL3Q9BXA9 1300 aa15.2■□□□□ 0.02
UBA3-203ENST00000415609 ANXA1P04083 346 aa15.19■□□□□ 0.02
UBA3-203ENST00000415609 DNAAF4Q8WXU2 420 aa15.19■□□□□ 0.02
UBA3-203ENST00000415609 PI4KAP2A4QPH2 592 aa15.19■□□□□ 0.02
UBA3-203ENST00000415609 DDX11L8A8MPP1 907 aa15.19■□□□□ 0.02
UBA3-203ENST00000415609 PI4KAP1Q8N8J0 262 aa15.19■□□□□ 0.02
UBA3-203ENST00000415609 RGPD5Q99666 1765 aa15.18■□□□□ 0.02
UBA3-203ENST00000415609 ZC3H6P61129 1189 aaKnown RBP15.18■□□□□ 0.02
UBA3-203ENST00000415609 BEND3Q5T5X7 828 aa15.17■□□□□ 0.02
UBA3-203ENST00000415609 PPP1R42Q7Z4L9 355 aa15.17■□□□□ 0.02
UBA3-203ENST00000415609 SSH3Q8TE77 659 aa15.17■□□□□ 0.02
UBA3-203ENST00000415609 TNPO1Q92973 898 aaKnown RBP15.17■□□□□ 0.02
UBA3-203ENST00000415609 BRPF3Q9ULD4 1205 aa15.17■□□□□ 0.02
UBA3-203ENST00000415609 TUBGCP6Q96RT7 1819 aa15.17■□□□□ 0.02
UBA3-203ENST00000415609 ALS2Q96Q42 1657 aa15.17■□□□□ 0.02
UBA3-203ENST00000415609 ATF3P18847 181 aa15.17■□□□□ 0.02
UBA3-203ENST00000415609 RAB3GAP1Q15042 981 aa15.17■□□□□ 0.02
UBA3-203ENST00000415609 IL27Q8NEV9 243 aa15.17■□□□□ 0.02
UBA3-203ENST00000415609 DBF4Q9UBU7 674 aaPredicted RBP15.17■□□□□ 0.02
UBA3-203ENST00000415609 ERBB3P21860 1342 aa15.16■□□□□ 0.02
UBA3-203ENST00000415609 ADCY9O60503 1353 aa15.16■□□□□ 0.02
UBA3-203ENST00000415609 TRIM6-TRIM34B2RNG4 842 aa15.16■□□□□ 0.02
UBA3-203ENST00000415609 NBPF7P0C2Y1 421 aaPredicted RBP15.16■□□□□ 0.02
UBA3-203ENST00000415609 RILPL2Q969X0 211 aa15.16■□□□□ 0.02
UBA3-203ENST00000415609 IL1RAPL2Q9NP60 686 aa15.16■□□□□ 0.02
UBA3-203ENST00000415609 SRGAP3O43295 1099 aa15.16■□□□□ 0.02
UBA3-203ENST00000415609 TRAK2O60296 914 aa15.16■□□□□ 0.02
UBA3-203ENST00000415609 SURF6O75683 361 aaKnown RBP15.16■□□□□ 0.02
UBA3-203ENST00000415609 POLA2Q14181 598 aa15.16■□□□□ 0.02
UBA3-203ENST00000415609 GBP4Q96PP9 640 aa15.16■□□□□ 0.02
UBA3-203ENST00000415609 MST1RQ04912 1400 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms