RNA–Protein interactions for RNA: ENST00000415068.1

ZNF3-206, Transcript of zinc finger protein 3, humanhuman

TSL 1 (best)

Gene ZNF3, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF3-206ENST00000415068 MRC1P22897 1456 aa17.07■□□□□ 0.32
ZNF3-206ENST00000415068 CCDC30Q5VVM6 783 aa17.07■□□□□ 0.32
ZNF3-206ENST00000415068 UNC5CLQ8IV45 518 aa17.07■□□□□ 0.32
ZNF3-206ENST00000415068 DZIP1LQ8IYY4 767 aaKnown RBP17.07■□□□□ 0.32
ZNF3-206ENST00000415068 NOB1Q9ULX3 412 aaKnown RBP17.07■□□□□ 0.32
ZNF3-206ENST00000415068 KDM6AO15550 1401 aaPredicted RBP17.06■□□□□ 0.32
ZNF3-206ENST00000415068 PTPRCP08575 1304 aa17.06■□□□□ 0.32
ZNF3-206ENST00000415068 SPATA31A5Q5VU36 1347 aa17.06■□□□□ 0.32
ZNF3-206ENST00000415068 SPATA31A7Q8IWB4 1347 aa17.06■□□□□ 0.32
ZNF3-206ENST00000415068 TRIM27P14373 513 aa17.06■□□□□ 0.32
ZNF3-206ENST00000415068 CRBNQ96SW2 442 aa17.06■□□□□ 0.32
ZNF3-206ENST00000415068 CHMP4BQ9H444 224 aaKnown RBP17.06■□□□□ 0.32
ZNF3-206ENST00000415068 KDM3BQ7LBC6 1761 aa17.06■□□□□ 0.32
ZNF3-206ENST00000415068 ADAMTS2O95450 1211 aa17.05■□□□□ 0.32
ZNF3-206ENST00000415068 VPS72Q15906 364 aa17.05■□□□□ 0.32
ZNF3-206ENST00000415068 API5Q9BZZ5 524 aaKnown RBP17.05■□□□□ 0.32
ZNF3-206ENST00000415068 NRAPQ86VF7 1730 aa17.04■□□□□ 0.32
ZNF3-206ENST00000415068 EXOC5O00471 708 aa17.04■□□□□ 0.32
ZNF3-206ENST00000415068 ELL2O00472 640 aaPredicted RBP17.04■□□□□ 0.32
ZNF3-206ENST00000415068 ZNF790Q6PG37 636 aa17.04■□□□□ 0.32
ZNF3-206ENST00000415068 NFATC2IPQ8NCF5 419 aa17.04■□□□□ 0.32
ZNF3-206ENST00000415068 FRAT1Q92837 279 aaPredicted RBP17.04■□□□□ 0.32
ZNF3-206ENST00000415068 VIRMAQ69YN4 1812 aaKnown RBP17.04■□□□□ 0.32
ZNF3-206ENST00000415068 PLCH1Q4KWH8 1693 aa17.04■□□□□ 0.32
ZNF3-206ENST00000415068 GIGYF1O75420 1035 aaPredicted RBP17.03■□□□□ 0.32
ZNF3-206ENST00000415068 BCL9LQ86UU0 1499 aa17.03■□□□□ 0.32
ZNF3-206ENST00000415068 NUTM2BA6NNL0 878 aaPredicted RBP17.02■□□□□ 0.32
ZNF3-206ENST00000415068 NUTM2EB1AL46 878 aaPredicted RBP17.02■□□□□ 0.32
ZNF3-206ENST00000415068 RLBP1P12271 317 aa17.02■□□□□ 0.32
ZNF3-206ENST00000415068 CANXP27824 592 aaKnown RBP17.02■□□□□ 0.32
ZNF3-206ENST00000415068 HSPA1LP34931 641 aa17.02■□□□□ 0.32
ZNF3-206ENST00000415068 CABP4P57796 275 aa17.02■□□□□ 0.32
ZNF3-206ENST00000415068 MVPQ14764 893 aaKnown RBP17.02■□□□□ 0.32
ZNF3-206ENST00000415068 KRT24Q2M2I5 525 aa17.02■□□□□ 0.32
ZNF3-206ENST00000415068 NUTM2AQ8IVF1 878 aaPredicted RBP17.02■□□□□ 0.32
ZNF3-206ENST00000415068 SLC4A2P04920 1241 aa17.01■□□□□ 0.31
ZNF3-206ENST00000415068 INTS3Q68E01 1043 aaKnown RBP17.01■□□□□ 0.31
ZNF3-206ENST00000415068 PANK1Q8TE04 598 aa17.01■□□□□ 0.31
ZNF3-206ENST00000415068 NGLY1Q96IV0 654 aa17.01■□□□□ 0.31
ZNF3-206ENST00000415068 CCDC136Q96JN2 1154 aa17.01■□□□□ 0.31
ZNF3-206ENST00000415068 BCL2L13Q9BXK5 485 aa17.01■□□□□ 0.31
ZNF3-206ENST00000415068 DDX19BQ9UMR2 479 aa17.01■□□□□ 0.31
ZNF3-206ENST00000415068 STK31Q9BXU1 1019 aa17■□□□□ 0.31
ZNF3-206ENST00000415068 ABCC4O15439 1325 aa16.99■□□□□ 0.31
ZNF3-206ENST00000415068 SHANK3Q9BYB0 1731 aa16.99■□□□□ 0.31
ZNF3-206ENST00000415068 KCNQ3O43525 872 aa16.99■□□□□ 0.31
ZNF3-206ENST00000415068 ONECUT3O60422 494 aaPredicted RBP16.99■□□□□ 0.31
ZNF3-206ENST00000415068 FTSJ3Q8IY81 847 aaKnown RBP16.98■□□□□ 0.31
ZNF3-206ENST00000415068 COG6Q9Y2V7 657 aa16.98■□□□□ 0.31
ZNF3-206ENST00000415068 LRP6O75581 1613 aa16.97■□□□□ 0.31
ZNF3-206ENST00000415068 ZBTB7BO15156 539 aaPredicted RBP16.97■□□□□ 0.31
ZNF3-206ENST00000415068 SNRPA1P09661 255 aaKnown RBP16.97■□□□□ 0.31
ZNF3-206ENST00000415068 DDX54Q8TDD1 881 aaKnown RBP16.97■□□□□ 0.31
ZNF3-206ENST00000415068 CLUAP1Q96AJ1 413 aa16.97■□□□□ 0.31
ZNF3-206ENST00000415068 ZBTB40Q9NUA8 1239 aa16.97■□□□□ 0.31
ZNF3-206ENST00000415068 DBF4Q9UBU7 674 aaPredicted RBP16.97■□□□□ 0.31
ZNF3-206ENST00000415068 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.96■□□□□ 0.31
ZNF3-206ENST00000415068 HDGFL1Q5TGJ6 251 aa16.96■□□□□ 0.31
ZNF3-206ENST00000415068 VSIG10Q8N0Z9 540 aa16.96■□□□□ 0.31
ZNF3-206ENST00000415068 FMNL2Q96PY5 1086 aa16.96■□□□□ 0.31
ZNF3-206ENST00000415068 IBTKQ9P2D0 1353 aaPredicted RBP16.96■□□□□ 0.31
ZNF3-206ENST00000415068 DDB1Q16531 1140 aa16.95■□□□□ 0.3
ZNF3-206ENST00000415068 B4GALNT3Q6L9W6 998 aa16.95■□□□□ 0.3
ZNF3-206ENST00000415068 PELP1Q8IZL8 1130 aaKnown RBP16.95■□□□□ 0.3
ZNF3-206ENST00000415068 TMEM57Q8N5G2 664 aa16.95■□□□□ 0.3
ZNF3-206ENST00000415068 USP35Q9P2H5 1018 aa16.95■□□□□ 0.3
ZNF3-206ENST00000415068 TNS2Q63HR2 1409 aa16.95■□□□□ 0.3
ZNF3-206ENST00000415068 ERBB4Q15303 1308 aa16.95■□□□□ 0.3
ZNF3-206ENST00000415068 ZNF496Q96IT1 587 aaPredicted RBP16.94■□□□□ 0.3
ZNF3-206ENST00000415068 TEX13AQ9BXU3 409 aaPredicted RBP16.94■□□□□ 0.3
ZNF3-206ENST00000415068 DDX21Q9NR30 783 aaKnown RBP eCLIP16.94■□□□□ 0.3
ZNF3-206ENST00000415068 HYPKQ9NX55 129 aa16.94■□□□□ 0.3
ZNF3-206ENST00000415068 TNNQ9UQP3 1299 aa16.94■□□□□ 0.3
ZNF3-206ENST00000415068 WNK3Q9BYP7 1800 aa16.93■□□□□ 0.3
ZNF3-206ENST00000415068 TTC5Q8N0Z6 440 aa16.93■□□□□ 0.3
ZNF3-206ENST00000415068 C8orf37Q96NL8 207 aa16.93■□□□□ 0.3
ZNF3-206ENST00000415068 USP21Q9UK80 565 aa16.93■□□□□ 0.3
ZNF3-206ENST00000415068 RGS12O14924 1447 aa16.93■□□□□ 0.3
ZNF3-206ENST00000415068 KDM2BQ8NHM5 1336 aa16.93■□□□□ 0.3
ZNF3-206ENST00000415068 CCT4P50991 539 aaKnown RBP16.92■□□□□ 0.3
ZNF3-206ENST00000415068 FLIIQ13045 1269 aa16.92■□□□□ 0.3
ZNF3-206ENST00000415068 CENPQQ7L2Z9 268 aaPredicted RBP16.92■□□□□ 0.3
ZNF3-206ENST00000415068 BCL9O00512 1426 aa16.91■□□□□ 0.3
ZNF3-206ENST00000415068 SLC39A6Q13433 755 aa16.91■□□□□ 0.3
ZNF3-206ENST00000415068 PDIA6Q15084 440 aa16.91■□□□□ 0.3
ZNF3-206ENST00000415068 G2E3Q7L622 706 aa16.91■□□□□ 0.3
ZNF3-206ENST00000415068 TMOD3Q9NYL9 352 aa16.91■□□□□ 0.3
ZNF3-206ENST00000415068 TCERG1O14776 1098 aaKnown RBP16.9■□□□□ 0.3
ZNF3-206ENST00000415068 HDAC1Q13547 482 aaPredicted RBP16.9■□□□□ 0.3
ZNF3-206ENST00000415068 PIGBQ92521 554 aa16.9■□□□□ 0.3
ZNF3-206ENST00000415068 MARCH10Q8NA82 808 aaPredicted RBP16.89■□□□□ 0.29
ZNF3-206ENST00000415068 GJD4Q96KN9 370 aaPredicted RBP16.89■□□□□ 0.29
ZNF3-206ENST00000415068 UBR2Q8IWV8 1755 aa16.89■□□□□ 0.29
ZNF3-206ENST00000415068 PAPPAQ13219 1627 aa16.88■□□□□ 0.29
ZNF3-206ENST00000415068 EIF2S2P20042 333 aaKnown RBP16.88■□□□□ 0.29
ZNF3-206ENST00000415068 LRP10Q7Z4F1 713 aa16.88■□□□□ 0.29
ZNF3-206ENST00000415068 ITPRIPQ8IWB1 547 aa16.88■□□□□ 0.29
ZNF3-206ENST00000415068 RWDD1Q9H446 243 aaPredicted RBP16.88■□□□□ 0.29
ZNF3-206ENST00000415068 TRPC5Q9UL62 973 aaPredicted RBP16.88■□□□□ 0.29
ZNF3-206ENST00000415068 PCDHB15Q9Y5E8 787 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms