RNA–Protein interactions for RNA: ENST00000415055.2

PTPRK-210, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 782 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-210ENST00000415055 LTBP4Q8N2S1 1624 aa7.56□□□□□ -1.2
PTPRK-210ENST00000415055 NUP153P49790 1475 aaKnown RBP7.56□□□□□ -1.2
PTPRK-210ENST00000415055 VSIG8P0DPA2 414 aa7.56□□□□□ -1.2
PTPRK-210ENST00000415055 CTDSPL2Q05D32 466 aa7.56□□□□□ -1.2
PTPRK-210ENST00000415055 CCDC116Q8IYX3 515 aa7.56□□□□□ -1.2
PTPRK-210ENST00000415055 CARD14Q9BXL6 1004 aa7.56□□□□□ -1.2
PTPRK-210ENST00000415055 GOPCQ9HD26 462 aa7.56□□□□□ -1.2
PTPRK-210ENST00000415055 IQSEC2Q5JU85 1478 aa7.55□□□□□ -1.2
PTPRK-210ENST00000415055 ERFEQ4G0M1 354 aa7.55□□□□□ -1.2
PTPRK-210ENST00000415055 TSEN34Q9BSV6 310 aaKnown RBP7.55□□□□□ -1.2
PTPRK-210ENST00000415055 MYO5CQ9NQX4 1742 aa7.55□□□□□ -1.2
PTPRK-210ENST00000415055 SAMD9Q5K651 1589 aa7.54□□□□□ -1.2
PTPRK-210ENST00000415055 SOS2Q07890 1332 aaPredicted RBP7.54□□□□□ -1.2
PTPRK-210ENST00000415055 PIP4K2BP78356 416 aa7.54□□□□□ -1.2
PTPRK-210ENST00000415055 FLIIQ13045 1269 aa7.54□□□□□ -1.2
PTPRK-210ENST00000415055 PDXDC2PQ6P474 469 aa7.54□□□□□ -1.2
PTPRK-210ENST00000415055 ATP1B4Q9UN42 357 aaPredicted RBP7.54□□□□□ -1.2
PTPRK-210ENST00000415055 MED1Q15648 1581 aaPredicted RBP7.54□□□□□ -1.2
PTPRK-210ENST00000415055 ZNF335Q9H4Z2 1342 aaPredicted RBP7.53□□□□□ -1.2
PTPRK-210ENST00000415055 PPFIA3O75145 1194 aa7.53□□□□□ -1.2
PTPRK-210ENST00000415055 SKIV2LQ15477 1246 aaKnown RBP7.53□□□□□ -1.2
PTPRK-210ENST00000415055 ARHGAP9Q9BRR9 750 aa7.53□□□□□ -1.2
PTPRK-210ENST00000415055 FKBPLQ9UIM3 349 aa7.53□□□□□ -1.2
PTPRK-210ENST00000415055 PRXQ9BXM0 1461 aa7.53□□□□□ -1.2
PTPRK-210ENST00000415055 CAMSAP1Q5T5Y3 1602 aa7.52□□□□□ -1.2
PTPRK-210ENST00000415055 PGPEP1Q9NXJ5 209 aa7.52□□□□□ -1.21
PTPRK-210ENST00000415055 DNMT3LQ9UJW3 386 aa7.52□□□□□ -1.21
PTPRK-210ENST00000415055 CDV3Q9UKY7 258 aaKnown RBP7.52□□□□□ -1.21
PTPRK-210ENST00000415055 NCOA1Q15788 1441 aa7.52□□□□□ -1.21
PTPRK-210ENST00000415055 HSPA1LP34931 641 aa7.51□□□□□ -1.21
PTPRK-210ENST00000415055 SH3D19Q5HYK7 790 aa7.51□□□□□ -1.21
PTPRK-210ENST00000415055 PPP1R26Q5T8A7 1209 aaPredicted RBP7.51□□□□□ -1.21
PTPRK-210ENST00000415055 EFCAB2Q5VUJ9 269 aa7.51□□□□□ -1.21
PTPRK-210ENST00000415055 LRRN4Q8WUT4 740 aa7.51□□□□□ -1.21
PTPRK-210ENST00000415055 SLC10A4Q96EP9 437 aa7.51□□□□□ -1.21
PTPRK-210ENST00000415055 CDK13Q14004 1512 aaKnown RBP7.51□□□□□ -1.21
PTPRK-210ENST00000415055 TRAPPC8Q9Y2L5 1435 aa7.51□□□□□ -1.21
PTPRK-210ENST00000415055 ZC3H4Q9UPT8 1303 aaKnown RBP7.51□□□□□ -1.21
PTPRK-210ENST00000415055 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.5□□□□□ -1.214e-6■■■■□ 21.6
PTPRK-210ENST00000415055 PPP2R2DQ66LE6 453 aa7.5□□□□□ -1.21
PTPRK-210ENST00000415055 Q6ZVU0 165 aa7.5□□□□□ -1.21
PTPRK-210ENST00000415055 ZBTB33Q86T24 672 aa7.5□□□□□ -1.21
PTPRK-210ENST00000415055 AFAP1Q8N556 730 aa7.5□□□□□ -1.21
PTPRK-210ENST00000415055 KCTD15Q96SI1 283 aaPredicted RBP7.5□□□□□ -1.21
PTPRK-210ENST00000415055 PLCH2O75038 1416 aa7.5□□□□□ -1.21
PTPRK-210ENST00000415055 ZNF518AQ6AHZ1 1483 aa7.49□□□□□ -1.21
PTPRK-210ENST00000415055 ARHGAP5Q13017 1502 aa7.49□□□□□ -1.21
PTPRK-210ENST00000415055 TTLL8A6PVC2 850 aa7.49□□□□□ -1.21
PTPRK-210ENST00000415055 DHX9Q08211 1270 aaKnown RBP7.49□□□□□ -1.21
PTPRK-210ENST00000415055 NR6A1Q15406 480 aa7.49□□□□□ -1.21
PTPRK-210ENST00000415055 PROCA1Q8NCQ7 364 aaPredicted RBP7.49□□□□□ -1.21
PTPRK-210ENST00000415055 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.49□□□□□ -1.21
PTPRK-210ENST00000415055 DIP2CQ9Y2E4 1556 aa7.49□□□□□ -1.21
PTPRK-210ENST00000415055 PTK2Q05397 1052 aa7.48□□□□□ -1.21
PTPRK-210ENST00000415055 CBLBQ13191 982 aa7.48□□□□□ -1.21
PTPRK-210ENST00000415055 FBXO31Q5XUX0 539 aaPredicted RBP7.48□□□□□ -1.21
PTPRK-210ENST00000415055 GPSM3Q9Y4H4 160 aa7.48□□□□□ -1.21
PTPRK-210ENST00000415055 ABCA6Q8N139 1617 aa7.48□□□□□ -1.21
PTPRK-210ENST00000415055 SPINT1O43278 529 aa7.47□□□□□ -1.21
PTPRK-210ENST00000415055 TOM1O60784 492 aa7.47□□□□□ -1.21
PTPRK-210ENST00000415055 CNTLNQ9NXG0 1405 aa7.46□□□□□ -1.21
PTPRK-210ENST00000415055 FIGNL2A6NMB9 653 aa7.46□□□□□ -1.22
PTPRK-210ENST00000415055 AP1G2O75843 785 aa7.46□□□□□ -1.22
PTPRK-210ENST00000415055 PTSQ03393 145 aa7.46□□□□□ -1.22
PTPRK-210ENST00000415055 PCMTD1Q96MG8 357 aaPredicted RBP7.46□□□□□ -1.22
PTPRK-210ENST00000415055 KDM5CP41229 1560 aa7.46□□□□□ -1.22
PTPRK-210ENST00000415055 KIF14Q15058 1648 aa7.45□□□□□ -1.22
PTPRK-210ENST00000415055 CLTCQ00610 1675 aaKnown RBP7.45□□□□□ -1.22
PTPRK-210ENST00000415055 INTS6LQ5JSJ4 861 aaKnown RBP7.45□□□□□ -1.22
PTPRK-210ENST00000415055 PNMA1Q8ND90 353 aa7.45□□□□□ -1.22
PTPRK-210ENST00000415055 OCSTAMPQ9BR26 566 aa7.45□□□□□ -1.22
PTPRK-210ENST00000415055 CDK11AQ9UQ88 783 aaPredicted RBP7.45□□□□□ -1.22
PTPRK-210ENST00000415055 MROH2AA6NES4 1674 aa7.44□□□□□ -1.22
PTPRK-210ENST00000415055 CDC42BPBQ9Y5S2 1711 aa7.44□□□□□ -1.22
PTPRK-210ENST00000415055 AGLP35573 1532 aa7.44□□□□□ -1.22
PTPRK-210ENST00000415055 ADAM32Q8TC27 787 aa7.44□□□□□ -1.22
PTPRK-210ENST00000415055 REREQ9P2R6 1566 aa7.44□□□□□ -1.22
PTPRK-210ENST00000415055 MYO3AQ8NEV4 1616 aa7.44□□□□□ -1.22
PTPRK-210ENST00000415055 CEP170BQ9Y4F5 1589 aaPredicted RBP7.43□□□□□ -1.22
PTPRK-210ENST00000415055 NBPF20Q3BBV1 942 aa7.43□□□□□ -1.22
PTPRK-210ENST00000415055 CCDC155Q8N6L0 562 aa7.43□□□□□ -1.22
PTPRK-210ENST00000415055 GPR161Q8N6U8 529 aaKnown RBP7.43□□□□□ -1.22
PTPRK-210ENST00000415055 ZNF142P52746 1687 aaPredicted RBP7.43□□□□□ -1.22
PTPRK-210ENST00000415055 ZMYM3Q14202 1370 aa7.43□□□□□ -1.22
PTPRK-210ENST00000415055 KIDINS220Q9ULH0 1771 aa7.43□□□□□ -1.22
PTPRK-210ENST00000415055 NPATQ14207 1427 aa7.43□□□□□ -1.22
PTPRK-210ENST00000415055 ITSN2Q9NZM3 1697 aa7.42□□□□□ -1.22
PTPRK-210ENST00000415055 POLR1AO95602 1720 aaPredicted RBP7.42□□□□□ -1.22
PTPRK-210ENST00000415055 RELBQ01201 579 aa7.42□□□□□ -1.22
PTPRK-210ENST00000415055 EPS8L1Q8TE68 723 aa7.42□□□□□ -1.22
PTPRK-210ENST00000415055 NANOS1Q8WY41 292 aaKnown RBP7.42□□□□□ -1.22
PTPRK-210ENST00000415055 AGBL1Q96MI9 1066 aa7.42□□□□□ -1.22
PTPRK-210ENST00000415055 CLIP1P30622 1438 aa7.42□□□□□ -1.22
PTPRK-210ENST00000415055 SLC35F4A4IF30 521 aa7.41□□□□□ -1.22
PTPRK-210ENST00000415055 USP17L8P0C7I0 530 aa7.41□□□□□ -1.22
PTPRK-210ENST00000415055 CTSOP43234 321 aaPredicted RBP7.41□□□□□ -1.22
PTPRK-210ENST00000415055 KRT76Q01546 638 aa7.41□□□□□ -1.22
PTPRK-210ENST00000415055 PLA2R1Q13018 1463 aa7.41□□□□□ -1.22
PTPRK-210ENST00000415055 MLH3Q9UHC1 1453 aa7.41□□□□□ -1.22
PTPRK-210ENST00000415055 A6NJR5 290 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms