RNA–Protein interactions for RNA: ENST00000414711.5

CPNE1-208, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-208ENST00000414711 C4AP0C0L4 1744 aa22.51■■□□□ 1.19
CPNE1-208ENST00000414711 SMG6Q86US8 1419 aaKnown RBP22.5■■□□□ 1.19
CPNE1-208ENST00000414711 SLC12A5Q9H2X9 1139 aa22.5■■□□□ 1.19
CPNE1-208ENST00000414711 TERF2IPQ9NYB0 399 aa22.5■■□□□ 1.19
CPNE1-208ENST00000414711 PCDH10Q9P2E7 1040 aa22.5■■□□□ 1.19
CPNE1-208ENST00000414711 PIGBQ92521 554 aa22.49■■□□□ 1.19
CPNE1-208ENST00000414711 DCAF5Q96JK2 942 aa22.49■■□□□ 1.19
CPNE1-208ENST00000414711 CYP27B1O15528 508 aa22.48■■□□□ 1.19
CPNE1-208ENST00000414711 FBLN1P23142 703 aa22.47■■□□□ 1.19
CPNE1-208ENST00000414711 ITPK1Q13572 414 aa22.47■■□□□ 1.19
CPNE1-208ENST00000414711 NLGN1Q8N2Q7 840 aa22.47■■□□□ 1.19
CPNE1-208ENST00000414711 COG3Q96JB2 828 aa22.47■■□□□ 1.19
CPNE1-208ENST00000414711 KCNA3P22001 575 aa22.46■■□□□ 1.19
CPNE1-208ENST00000414711 TMF1P82094 1093 aa22.46■■□□□ 1.19
CPNE1-208ENST00000414711 PIM2Q9P1W9 311 aa22.45■■□□□ 1.18
CPNE1-208ENST00000414711 DALRD3Q5D0E6 543 aaKnown RBP22.44■■□□□ 1.18
CPNE1-208ENST00000414711 ZC3H4Q9UPT8 1303 aaKnown RBP22.43■■□□□ 1.18
CPNE1-208ENST00000414711 ATP6V1AP38606 617 aa22.43■■□□□ 1.18
CPNE1-208ENST00000414711 L3MBTL2Q969R5 705 aa22.43■■□□□ 1.18
CPNE1-208ENST00000414711 PARP3Q9Y6F1 533 aa22.42■■□□□ 1.18
CPNE1-208ENST00000414711 SBF1O95248 1867 aa22.42■■□□□ 1.18
CPNE1-208ENST00000414711 VEGFAP15692 232 aaPredicted RBP22.41■■□□□ 1.18
CPNE1-208ENST00000414711 RRS1Q15050 365 aaKnown RBP22.41■■□□□ 1.18
CPNE1-208ENST00000414711 TRAPPC3LQ5T215 181 aa22.41■■□□□ 1.18
CPNE1-208ENST00000414711 RTCBQ9Y3I0 505 aaKnown RBP22.41■■□□□ 1.18
CPNE1-208ENST00000414711 FAM161AQ3B820 660 aa22.4■■□□□ 1.18
CPNE1-208ENST00000414711 FOXN1O15353 648 aa22.39■■□□□ 1.17
CPNE1-208ENST00000414711 GYS1P13807 737 aa22.39■■□□□ 1.17
CPNE1-208ENST00000414711 PRDM10Q9NQV6 1147 aa22.39■■□□□ 1.17
CPNE1-208ENST00000414711 TMOD3Q9NYL9 352 aa22.39■■□□□ 1.17
CPNE1-208ENST00000414711 ASAP1Q9ULH1 1129 aa22.39■■□□□ 1.17
CPNE1-208ENST00000414711 ADRA2BP18089 450 aa22.38■■□□□ 1.17
CPNE1-208ENST00000414711 KDM6AO15550 1401 aaPredicted RBP22.38■■□□□ 1.17
CPNE1-208ENST00000414711 NKX1-1Q15270 411 aaPredicted RBP22.37■■□□□ 1.17
CPNE1-208ENST00000414711 MKRN1Q9UHC7 482 aaKnown RBP22.37■■□□□ 1.17
CPNE1-208ENST00000414711 GLTPD2A6NH11 291 aa22.36■■□□□ 1.17
CPNE1-208ENST00000414711 ARHGEF1Q92888 912 aaKnown RBP22.36■■□□□ 1.17
CPNE1-208ENST00000414711 KDRP35968 1356 aa22.36■■□□□ 1.17
CPNE1-208ENST00000414711 RASSF7Q02833 373 aa22.35■■□□□ 1.17
CPNE1-208ENST00000414711 INSRP06213 1382 aa22.35■■□□□ 1.17
CPNE1-208ENST00000414711 RFC4P35249 363 aa22.34■■□□□ 1.17
CPNE1-208ENST00000414711 CREBZFQ9NS37 354 aa22.34■■□□□ 1.17
CPNE1-208ENST00000414711 TIAM2Q8IVF5 1701 aa22.34■■□□□ 1.17
CPNE1-208ENST00000414711 CHRNA5P30532 468 aa22.33■■□□□ 1.17
CPNE1-208ENST00000414711 HSP90AB2PQ58FF8 381 aa22.32■■□□□ 1.16
CPNE1-208ENST00000414711 ATG3Q9NT62 314 aa22.32■■□□□ 1.16
CPNE1-208ENST00000414711 FLT4P35916 1363 aa22.31■■□□□ 1.16
CPNE1-208ENST00000414711 LMNB1P20700 586 aa22.31■■□□□ 1.16
CPNE1-208ENST00000414711 CTCFP49711 727 aaPredicted RBP22.31■■□□□ 1.16
CPNE1-208ENST00000414711 COL5A3P25940 1745 aaPredicted RBP22.31■■□□□ 1.16
CPNE1-208ENST00000414711 CNTNAP4Q9C0A0 1308 aa22.31■■□□□ 1.16
CPNE1-208ENST00000414711 AIDAQ96BJ3 306 aa22.3■■□□□ 1.16
CPNE1-208ENST00000414711 SPG7Q9UQ90 795 aa22.3■■□□□ 1.16
CPNE1-208ENST00000414711 ZNF831Q5JPB2 1677 aa22.3■■□□□ 1.16
CPNE1-208ENST00000414711 PUS7Q96PZ0 661 aaKnown RBP22.29■■□□□ 1.16
CPNE1-208ENST00000414711 CNTNAP1P78357 1384 aa22.28■■□□□ 1.16
CPNE1-208ENST00000414711 DDR1Q08345 913 aa22.28■■□□□ 1.16
CPNE1-208ENST00000414711 RC3H1Q5TC82 1133 aaKnown RBP22.28■■□□□ 1.16
CPNE1-208ENST00000414711 ABHD8Q96I13 439 aa22.28■■□□□ 1.16
CPNE1-208ENST00000414711 NCAPD2Q15021 1401 aa22.28■■□□□ 1.16
CPNE1-208ENST00000414711 RPS6KA4O75676 772 aa22.27■■□□□ 1.16
CPNE1-208ENST00000414711 SLC4A9Q96Q91 983 aa22.27■■□□□ 1.16
CPNE1-208ENST00000414711 KIF24Q5T7B8 1368 aa22.26■■□□□ 1.15
CPNE1-208ENST00000414711 POTECB2RU33 542 aa22.25■■□□□ 1.15
CPNE1-208ENST00000414711 LBX1P52954 281 aa22.24■■□□□ 1.15
CPNE1-208ENST00000414711 FKBP8Q14318 412 aa22.24■■□□□ 1.15
CPNE1-208ENST00000414711 RBM42Q9BTD8 480 aaKnown RBP22.24■■□□□ 1.15
CPNE1-208ENST00000414711 CARD11Q9BXL7 1154 aa22.24■■□□□ 1.15
CPNE1-208ENST00000414711 GGNBP2Q9H3C7 697 aa22.24■■□□□ 1.15
CPNE1-208ENST00000414711 MLLT1Q03111 559 aaPredicted RBP22.23■■□□□ 1.15
CPNE1-208ENST00000414711 CHADLQ6NUI6 762 aa22.23■■□□□ 1.15
CPNE1-208ENST00000414711 SRP68Q9UHB9 627 aaKnown RBP22.23■■□□□ 1.15
CPNE1-208ENST00000414711 PHKG2P15735 406 aa22.22■■□□□ 1.15
CPNE1-208ENST00000414711 USP42Q9H9J4 1324 aaKnown RBP22.22■■□□□ 1.15
CPNE1-208ENST00000414711 FYB1O15117 783 aa22.21■■□□□ 1.15
CPNE1-208ENST00000414711 IFNL2Q8IZJ0 200 aa22.21■■□□□ 1.15
CPNE1-208ENST00000414711 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.21■■□□□ 1.152e-6■■□□□ 12.3
CPNE1-208ENST00000414711 MYH14Q7Z406 1995 aaKnown RBP22.21■■□□□ 1.15
CPNE1-208ENST00000414711 POLRMTO00411 1230 aaKnown RBP22.2■■□□□ 1.14
CPNE1-208ENST00000414711 DPY19L2Q6NUT2 758 aa22.19■■□□□ 1.14
CPNE1-208ENST00000414711 DLEC1Q9Y238 1755 aa22.18■■□□□ 1.14
CPNE1-208ENST00000414711 TONSLQ96HA7 1378 aa22.18■■□□□ 1.14
CPNE1-208ENST00000414711 VEGFBP49765 207 aa22.18■■□□□ 1.14
CPNE1-208ENST00000414711 WBP1LQ9NX94 342 aa22.18■■□□□ 1.14
CPNE1-208ENST00000414711 NFKBIEO00221 500 aa22.17■■□□□ 1.14
CPNE1-208ENST00000414711 CCDC88AQ3V6T2 1871 aa22.17■■□□□ 1.14
CPNE1-208ENST00000414711 POTEIP0CG38 1075 aa22.16■■□□□ 1.14
CPNE1-208ENST00000414711 POTEJP0CG39 1038 aa22.16■■□□□ 1.14
CPNE1-208ENST00000414711 HSPA8P11142 646 aaKnown RBP22.16■■□□□ 1.14
CPNE1-208ENST00000414711 SIN3AQ96ST3 1273 aa22.15■■□□□ 1.14
CPNE1-208ENST00000414711 VIRMAQ69YN4 1812 aaKnown RBP22.15■■□□□ 1.14
CPNE1-208ENST00000414711 KIF20BQ96Q89 1820 aa22.15■■□□□ 1.14
CPNE1-208ENST00000414711 PASKQ96RG2 1323 aa22.14■■□□□ 1.14
CPNE1-208ENST00000414711 CCDC85CA6NKD9 419 aa22.14■■□□□ 1.13
CPNE1-208ENST00000414711 CRKLP46109 303 aaKnown RBP22.14■■□□□ 1.13
CPNE1-208ENST00000414711 TTLL6Q8N841 843 aa22.14■■□□□ 1.13
CPNE1-208ENST00000414711 EMILIN1Q9Y6C2 1016 aa22.14■■□□□ 1.13
CPNE1-208ENST00000414711 TM4SF1P30408 202 aa22.13■■□□□ 1.13
CPNE1-208ENST00000414711 RGS19P49795 217 aa22.13■■□□□ 1.13
CPNE1-208ENST00000414711 ERVV-2B6SEH9 535 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms