RNA–Protein interactions for RNA: ENST00000413354.5

MCF2L-211, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-211ENST00000413354 AK7Q96M32 723 aa21.08■□□□□ 0.97
MCF2L-211ENST00000413354 ATG3Q9NT62 314 aa21.08■□□□□ 0.97
MCF2L-211ENST00000413354 NUDCQ9Y266 331 aa21.08■□□□□ 0.97
MCF2L-211ENST00000413354 ADAMTS7Q9UKP4 1686 aa21.06■□□□□ 0.96
MCF2L-211ENST00000413354 SGIP1Q9BQI5 828 aa21.06■□□□□ 0.96
MCF2L-211ENST00000413354 MRC1P22897 1456 aa21.06■□□□□ 0.96
MCF2L-211ENST00000413354 POLD1P28340 1107 aa21.05■□□□□ 0.96
MCF2L-211ENST00000413354 ATP6V1AP38606 617 aa21.05■□□□□ 0.96
MCF2L-211ENST00000413354 COL5A3P25940 1745 aaPredicted RBP21.04■□□□□ 0.96
MCF2L-211ENST00000413354 MSH5O43196 834 aa21.04■□□□□ 0.96
MCF2L-211ENST00000413354 MTHFSDQ2M296 383 aaKnown RBP21.03■□□□□ 0.96
MCF2L-211ENST00000413354 COL23A1Q86Y22 540 aaPredicted RBP21.03■□□□□ 0.96
MCF2L-211ENST00000413354 GAS2L2Q8NHY3 880 aa21.03■□□□□ 0.96
MCF2L-211ENST00000413354 ARXQ96QS3 562 aa21.03■□□□□ 0.96
MCF2L-211ENST00000413354 CICQ96RK0 1608 aaPredicted RBP21.03■□□□□ 0.96
MCF2L-211ENST00000413354 NFATC2IPQ8NCF5 419 aa21.02■□□□□ 0.96
MCF2L-211ENST00000413354 LINC00116Q8NCU8 138 aa21.02■□□□□ 0.96
MCF2L-211ENST00000413354 RBM42Q9BTD8 480 aaKnown RBP21.02■□□□□ 0.96
MCF2L-211ENST00000413354 DCAF8L1A6NGE4 600 aa21.01■□□□□ 0.95
MCF2L-211ENST00000413354 RNMTO43148 476 aaKnown RBP21.01■□□□□ 0.95
MCF2L-211ENST00000413354 SSFA2P28290 1259 aa21.01■□□□□ 0.95
MCF2L-211ENST00000413354 ITPK1Q13572 414 aa21.01■□□□□ 0.95
MCF2L-211ENST00000413354 SLC52A2Q9HAB3 445 aa21.01■□□□□ 0.95
MCF2L-211ENST00000413354 MAP3K5Q99683 1374 aa21■□□□□ 0.95
MCF2L-211ENST00000413354 ZEB1P37275 1124 aaPredicted RBP20.99■□□□□ 0.95
MCF2L-211ENST00000413354 FHDC1Q9C0D6 1143 aaPredicted RBP20.99■□□□□ 0.95
MCF2L-211ENST00000413354 GNPATO15228 680 aa20.98■□□□□ 0.95
MCF2L-211ENST00000413354 U2AF1L5P0DN76 240 aaPredicted RBP20.98■□□□□ 0.95
MCF2L-211ENST00000413354 PRKAR2BP31323 418 aa20.98■□□□□ 0.95
MCF2L-211ENST00000413354 U2AF1Q01081 240 aaKnown RBP eCLIP20.98■□□□□ 0.95
MCF2L-211ENST00000413354 RSPH6AQ9H0K4 717 aa20.98■□□□□ 0.95
MCF2L-211ENST00000413354 TJP1Q07157 1748 aa20.98■□□□□ 0.95
MCF2L-211ENST00000413354 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.97■□□□□ 0.95
MCF2L-211ENST00000413354 PHF14O94880 888 aa20.97■□□□□ 0.95
MCF2L-211ENST00000413354 LGR6Q9HBX8 967 aa20.97■□□□□ 0.95
MCF2L-211ENST00000413354 CNTNAP4Q9C0A0 1308 aa20.97■□□□□ 0.95
MCF2L-211ENST00000413354 SIPA1L3O60292 1781 aaPredicted RBP20.96■□□□□ 0.95
MCF2L-211ENST00000413354 GNAT3A8MTJ3 354 aa20.96■□□□□ 0.95
MCF2L-211ENST00000413354 RALBP1Q15311 655 aa20.96■□□□□ 0.95
MCF2L-211ENST00000413354 RC3H1Q5TC82 1133 aaKnown RBP20.96■□□□□ 0.95
MCF2L-211ENST00000413354 SLC4A9Q96Q91 983 aa20.96■□□□□ 0.95
MCF2L-211ENST00000413354 SYT17Q9BSW7 474 aa20.96■□□□□ 0.95
MCF2L-211ENST00000413354 MYH14Q7Z406 1995 aaKnown RBP20.96■□□□□ 0.95
MCF2L-211ENST00000413354 UBR2Q8IWV8 1755 aa20.95■□□□□ 0.94
MCF2L-211ENST00000413354 PTCD1O75127 700 aaKnown RBP20.95■□□□□ 0.94
MCF2L-211ENST00000413354 FCHSD2O94868 740 aa20.95■□□□□ 0.94
MCF2L-211ENST00000413354 DDX10Q13206 875 aaKnown RBP20.94■□□□□ 0.94
MCF2L-211ENST00000413354 RTCBQ9Y3I0 505 aaKnown RBP20.94■□□□□ 0.94
MCF2L-211ENST00000413354 ADRA2BP18089 450 aa20.93■□□□□ 0.94
MCF2L-211ENST00000413354 TEFQ10587 303 aa20.93■□□□□ 0.94
MCF2L-211ENST00000413354 MSL1Q68DK7 614 aa20.93■□□□□ 0.94
MCF2L-211ENST00000413354 AMIGO3Q86WK7 504 aa20.92■□□□□ 0.94
MCF2L-211ENST00000413354 KCPQ6ZWJ8 1503 aa20.92■□□□□ 0.94
MCF2L-211ENST00000413354 NEFMP07197 916 aa20.91■□□□□ 0.94
MCF2L-211ENST00000413354 C4AP0C0L4 1744 aa20.91■□□□□ 0.94
MCF2L-211ENST00000413354 KLHL34Q8N239 644 aa20.91■□□□□ 0.94
MCF2L-211ENST00000413354 PHACTR3Q96KR7 559 aa20.91■□□□□ 0.94
MCF2L-211ENST00000413354 TTC5Q8N0Z6 440 aa20.9■□□□□ 0.94
MCF2L-211ENST00000413354 CEMIPQ8WUJ3 1361 aa20.89■□□□□ 0.93
MCF2L-211ENST00000413354 RPS6KA4O75676 772 aa20.89■□□□□ 0.93
MCF2L-211ENST00000413354 CRKLP46109 303 aaKnown RBP20.89■□□□□ 0.93
MCF2L-211ENST00000413354 SLC39A6Q13433 755 aa20.89■□□□□ 0.93
MCF2L-211ENST00000413354 TRAPPC3LQ5T215 181 aa20.89■□□□□ 0.93
MCF2L-211ENST00000413354 IL17REQ8NFR9 667 aa20.88■□□□□ 0.93
MCF2L-211ENST00000413354 RTF1Q92541 710 aaKnown RBP20.88■□□□□ 0.93
MCF2L-211ENST00000413354 DLG5Q8TDM6 1919 aa20.88■□□□□ 0.93
MCF2L-211ENST00000413354 SMIM5Q71RC9 77 aa20.87■□□□□ 0.93
MCF2L-211ENST00000413354 VSIG10Q8N0Z9 540 aa20.87■□□□□ 0.93
MCF2L-211ENST00000413354 PNNQ9H307 717 aaKnown RBP20.87■□□□□ 0.93
MCF2L-211ENST00000413354 MYBBP1AQ9BQG0 1328 aaKnown RBP20.86■□□□□ 0.93
MCF2L-211ENST00000413354 HTATSF1O43719 755 aaKnown RBP20.85■□□□□ 0.93
MCF2L-211ENST00000413354 RFC4P35249 363 aa20.85■□□□□ 0.93
MCF2L-211ENST00000413354 DNAJC10Q8IXB1 793 aa20.85■□□□□ 0.93
MCF2L-211ENST00000413354 CHD4Q14839 1912 aa20.84■□□□□ 0.93
MCF2L-211ENST00000413354 ZNF790Q6PG37 636 aa20.84■□□□□ 0.93
MCF2L-211ENST00000413354 ARHGEF1Q92888 912 aaKnown RBP20.84■□□□□ 0.93
MCF2L-211ENST00000413354 CCDC87Q9NVE4 849 aa20.84■□□□□ 0.93
MCF2L-211ENST00000413354 NLGN1Q8N2Q7 840 aa20.83■□□□□ 0.93
MCF2L-211ENST00000413354 CD2APQ9Y5K6 639 aa20.83■□□□□ 0.93
MCF2L-211ENST00000413354 MAPK8IP3Q9UPT6 1336 aa20.82■□□□□ 0.92
MCF2L-211ENST00000413354 CYP19A1P11511 503 aaPredicted RBP20.81■□□□□ 0.92
MCF2L-211ENST00000413354 INTS5Q6P9B9 1019 aaKnown RBP20.81■□□□□ 0.92
MCF2L-211ENST00000413354 TEX13AQ9BXU3 409 aaPredicted RBP20.81■□□□□ 0.92
MCF2L-211ENST00000413354 HEG1Q9ULI3 1381 aa20.81■□□□□ 0.92
MCF2L-211ENST00000413354 BTBD11A6QL63 1104 aa20.8■□□□□ 0.92
MCF2L-211ENST00000413354 STARD3NLO95772 234 aa20.8■□□□□ 0.92
MCF2L-211ENST00000413354 FMNL2Q96PY5 1086 aa20.8■□□□□ 0.92
MCF2L-211ENST00000413354 KIF13BQ9NQT8 1826 aa20.8■□□□□ 0.92
MCF2L-211ENST00000413354 SOS1Q07889 1333 aaPredicted RBP20.79■□□□□ 0.92
MCF2L-211ENST00000413354 MMP10P09238 476 aa20.79■□□□□ 0.92
MCF2L-211ENST00000413354 GYS1P13807 737 aa20.79■□□□□ 0.92
MCF2L-211ENST00000413354 MCM10Q7L590 875 aa20.79■□□□□ 0.92
MCF2L-211ENST00000413354 NLGN2Q8NFZ4 835 aa20.79■□□□□ 0.92
MCF2L-211ENST00000413354 ZNF496Q96IT1 587 aaPredicted RBP20.79■□□□□ 0.92
MCF2L-211ENST00000413354 PLEKHF1Q96S99 279 aa20.79■□□□□ 0.92
MCF2L-211ENST00000413354 USP42Q9H9J4 1324 aaKnown RBP20.78■□□□□ 0.92
MCF2L-211ENST00000413354 COL15A1P39059 1388 aa20.78■□□□□ 0.92
MCF2L-211ENST00000413354 GPR162Q16538 588 aa20.78■□□□□ 0.92
MCF2L-211ENST00000413354 NFE2L2Q16236 605 aa20.77■□□□□ 0.92
MCF2L-211ENST00000413354 ZBTB1Q9Y2K1 713 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms