RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 PIBF1Q8WXW3 757 aa6.24□□□□□ -1.41
HERC4-205ENST00000412272 MIEF2Q96C03 454 aa6.24□□□□□ -1.41
HERC4-205ENST00000412272 SPTLC3Q9NUV7 552 aa6.24□□□□□ -1.41
HERC4-205ENST00000412272 SYNPO2Q9UMS6 1093 aa6.24□□□□□ -1.41
HERC4-205ENST00000412272 SMAPO00193 183 aa6.23□□□□□ -1.41
HERC4-205ENST00000412272 RIOK3O14730 519 aaKnown RBP6.23□□□□□ -1.41
HERC4-205ENST00000412272 ECM2O94769 699 aaPredicted RBP6.23□□□□□ -1.41
HERC4-205ENST00000412272 CCDC15Q0P6D6 951 aa6.23□□□□□ -1.41
HERC4-205ENST00000412272 TRAF1Q13077 416 aa6.23□□□□□ -1.41
HERC4-205ENST00000412272 PSMD2Q13200 908 aa6.23□□□□□ -1.41
HERC4-205ENST00000412272 SLC5A9Q2M3M2 681 aa6.23□□□□□ -1.41
HERC4-205ENST00000412272 NBPF8Q3BBV2 869 aa6.23□□□□□ -1.41
HERC4-205ENST00000412272 CHMLP26374 656 aa6.23□□□□□ -1.41
HERC4-205ENST00000412272 NAP1L1P55209 391 aaKnown RBP6.23□□□□□ -1.41
HERC4-205ENST00000412272 RBM26Q5T8P6 1007 aaKnown RBP6.23□□□□□ -1.41
HERC4-205ENST00000412272 CCDC181Q5TID7 509 aa6.23□□□□□ -1.41
HERC4-205ENST00000412272 MAMSTRQ6ZN01 415 aa6.23□□□□□ -1.41
HERC4-205ENST00000412272 L3MBTL2Q969R5 705 aa6.23□□□□□ -1.41
HERC4-205ENST00000412272 GOPCQ9HD26 462 aa6.23□□□□□ -1.41
HERC4-205ENST00000412272 CHCHD3Q9NX63 227 aaKnown RBP6.23□□□□□ -1.41
HERC4-205ENST00000412272 SEC24BO95487 1268 aa6.23□□□□□ -1.41
HERC4-205ENST00000412272 PUS10Q3MIT2 529 aaKnown RBP6.23□□□□□ -1.41
HERC4-205ENST00000412272 CXorf38Q8TB03 319 aa6.23□□□□□ -1.41
HERC4-205ENST00000412272 STK24Q9Y6E0 443 aa6.23□□□□□ -1.41
HERC4-205ENST00000412272 USP47Q96K76 1375 aa6.23□□□□□ -1.41
HERC4-205ENST00000412272 GRIK3Q13003 919 aa6.23□□□□□ -1.41
HERC4-205ENST00000412272 WWC2Q6AWC2 1192 aa6.23□□□□□ -1.41
HERC4-205ENST00000412272 KCNB2Q92953 911 aa6.23□□□□□ -1.41
HERC4-205ENST00000412272 FMNL2Q96PY5 1086 aa6.23□□□□□ -1.41
HERC4-205ENST00000412272 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.23□□□□□ -1.41
HERC4-205ENST00000412272 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.23□□□□□ -1.41
HERC4-205ENST00000412272 ADGBQ8N7X0 1667 aa6.23□□□□□ -1.41
HERC4-205ENST00000412272 SYNRGQ9UMZ2 1314 aa6.22□□□□□ -1.41
HERC4-205ENST00000412272 GOLGA6L22H0YM25 854 aa6.22□□□□□ -1.41
HERC4-205ENST00000412272 PES1O00541 588 aaKnown RBP6.22□□□□□ -1.41
HERC4-205ENST00000412272 MAGEA9P43362 315 aa6.22□□□□□ -1.41
HERC4-205ENST00000412272 RPS6KA3P51812 740 aa6.22□□□□□ -1.41
HERC4-205ENST00000412272 AP1ARQ63HQ0 302 aa6.22□□□□□ -1.41
HERC4-205ENST00000412272 AGAP3Q96P47 875 aa6.22□□□□□ -1.41
HERC4-205ENST00000412272 LARP6Q9BRS8 491 aaKnown RBP6.22□□□□□ -1.41
HERC4-205ENST00000412272 RRP15Q9Y3B9 282 aaKnown RBP6.22□□□□□ -1.41
HERC4-205ENST00000412272 DNMT1P26358 1616 aaKnown RBP6.22□□□□□ -1.41
HERC4-205ENST00000412272 GRIN2AQ12879 1464 aa6.22□□□□□ -1.41
HERC4-205ENST00000412272 GRIN2BQ13224 1484 aa6.22□□□□□ -1.41
HERC4-205ENST00000412272 ARMC3Q5W041 872 aa6.22□□□□□ -1.41
HERC4-205ENST00000412272 NFXL1Q6ZNB6 911 aa6.22□□□□□ -1.41
HERC4-205ENST00000412272 PHC3Q8NDX5 983 aa6.22□□□□□ -1.41
HERC4-205ENST00000412272 ZNF483Q8TF39 744 aaPredicted RBP6.22□□□□□ -1.41
HERC4-205ENST00000412272 YIPF2Q9BWQ6 316 aa6.22□□□□□ -1.41
HERC4-205ENST00000412272 C22orf23Q9BZE7 217 aa6.22□□□□□ -1.41
HERC4-205ENST00000412272 FAM135AQ9P2D6 1515 aa6.22□□□□□ -1.41
HERC4-205ENST00000412272 CCP110O43303 1012 aa6.22□□□□□ -1.41
HERC4-205ENST00000412272 VEZTQ9HBM0 779 aa6.22□□□□□ -1.41
HERC4-205ENST00000412272 SLC24A3Q9HC58 644 aa6.22□□□□□ -1.41
HERC4-205ENST00000412272 CWC25Q9NXE8 425 aaPredicted RBP6.22□□□□□ -1.41
HERC4-205ENST00000412272 BIN2Q9UBW5 565 aaPredicted RBP6.22□□□□□ -1.41
HERC4-205ENST00000412272 FRMD4BQ9Y2L6 1034 aa6.22□□□□□ -1.41
HERC4-205ENST00000412272 CC2D2AQ9P2K1 1620 aa6.22□□□□□ -1.41
HERC4-205ENST00000412272 MMS22LQ6ZRQ5 1243 aa6.21□□□□□ -1.41
HERC4-205ENST00000412272 DRAXINQ8NBI3 349 aaPredicted RBP6.21□□□□□ -1.41
HERC4-205ENST00000412272 PICK1Q9NRD5 415 aa6.21□□□□□ -1.41
HERC4-205ENST00000412272 NKTRP30414 1462 aaKnown RBP6.21□□□□□ -1.42
HERC4-205ENST00000412272 CLTCL1P53675 1640 aa6.21□□□□□ -1.42
HERC4-205ENST00000412272 TRPM1Q7Z4N2 1603 aa6.21□□□□□ -1.42
HERC4-205ENST00000412272 EIF3JO75822 258 aaKnown RBP6.21□□□□□ -1.42
HERC4-205ENST00000412272 ERCC3P19447 782 aa6.21□□□□□ -1.42
HERC4-205ENST00000412272 DUSP27Q5VZP5 1158 aa6.21□□□□□ -1.42
HERC4-205ENST00000412272 RBSNQ9H1K0 784 aa6.21□□□□□ -1.42
HERC4-205ENST00000412272 CPP00450 1065 aa6.21□□□□□ -1.42
HERC4-205ENST00000412272 RWDD2BP57060 319 aa6.21□□□□□ -1.42
HERC4-205ENST00000412272 IFT88Q13099 833 aa6.21□□□□□ -1.42
HERC4-205ENST00000412272 PDE3AQ14432 1141 aa6.21□□□□□ -1.42
HERC4-205ENST00000412272 TXLNBQ8N3L3 684 aa6.21□□□□□ -1.42
HERC4-205ENST00000412272 NEK11Q8NG66 645 aa6.21□□□□□ -1.42
HERC4-205ENST00000412272 PPFIA4O75335 1185 aa6.2□□□□□ -1.42
HERC4-205ENST00000412272 RBM6P78332 1123 aaKnown RBP6.2□□□□□ -1.42
HERC4-205ENST00000412272 NOL8Q76FK4 1167 aaKnown RBP6.2□□□□□ -1.42
HERC4-205ENST00000412272 CACTIN-AS1Q8N1I8 211 aa6.2□□□□□ -1.42
HERC4-205ENST00000412272 CCDC191Q8NCU4 936 aa6.2□□□□□ -1.42
HERC4-205ENST00000412272 IRX2Q9BZI1 471 aaPredicted RBP6.2□□□□□ -1.42
HERC4-205ENST00000412272 LMCD1Q9NZU5 365 aa6.2□□□□□ -1.42
HERC4-205ENST00000412272 CUL7Q14999 1698 aa6.2□□□□□ -1.42
HERC4-205ENST00000412272 NEBLO76041 1014 aa6.2□□□□□ -1.42
HERC4-205ENST00000412272 IMPDH2P12268 514 aa6.2□□□□□ -1.42
HERC4-205ENST00000412272 SH3GL3Q99963 347 aa6.2□□□□□ -1.42
HERC4-205ENST00000412272 KDM5DQ9BY66 1539 aa6.2□□□□□ -1.42
HERC4-205ENST00000412272 TACO1Q9BSH4 297 aaKnown RBP6.2□□□□□ -1.42
HERC4-205ENST00000412272 CPSF2Q9P2I0 782 aaKnown RBP6.2□□□□□ -1.42
HERC4-205ENST00000412272 SOS1Q07889 1333 aaPredicted RBP6.2□□□□□ -1.42
HERC4-205ENST00000412272 EME2A4GXA9 379 aaPredicted RBP6.2□□□□□ -1.42
HERC4-205ENST00000412272 AP1G2O75843 785 aa6.2□□□□□ -1.42
HERC4-205ENST00000412272 SMC2O95347 1197 aa6.2□□□□□ -1.42
HERC4-205ENST00000412272 MYLK4Q86YV6 388 aaPredicted RBP6.2□□□□□ -1.42
HERC4-205ENST00000412272 ABCC10Q5T3U5 1492 aa6.19□□□□□ -1.42
HERC4-205ENST00000412272 PLEKHH1Q9ULM0 1364 aa6.19□□□□□ -1.42
HERC4-205ENST00000412272 SETSIPP0DME0 302 aa6.19□□□□□ -1.42
HERC4-205ENST00000412272 PDIA5Q14554 519 aa6.19□□□□□ -1.42
HERC4-205ENST00000412272 KIF2CQ99661 725 aa6.19□□□□□ -1.42
HERC4-205ENST00000412272 CROCC2H7BZ55 1655 aa6.19□□□□□ -1.42
HERC4-205ENST00000412272 FCHSD2O94868 740 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms