RNA–Protein interactions for RNA: ENST00000411849.1

HMGN1P20-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 20, humanhuman

BASIC

Gene HMGN1P20, Length 300 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P20-201ENST00000411849 MAP3K19Q56UN5 1328 aa8.5□□□□□ -1.05
HMGN1P20-201ENST00000411849 PCDH11XQ9BZA7 1347 aa8.5□□□□□ -1.05
HMGN1P20-201ENST00000411849 PCDH11YQ9BZA8 1340 aa8.5□□□□□ -1.05
HMGN1P20-201ENST00000411849 GOLGB1Q14789 3259 aaKnown RBP8.49□□□□□ -1.05
HMGN1P20-201ENST00000411849 TNRC6CQ9HCJ0 1690 aaKnown RBP8.49□□□□□ -1.05
HMGN1P20-201ENST00000411849 TATP17735 454 aaPredicted RBP8.48□□□□□ -1.05
HMGN1P20-201ENST00000411849 SSFA2P28290 1259 aa8.48□□□□□ -1.05
HMGN1P20-201ENST00000411849 CLEC11AQ9Y240 323 aa8.48□□□□□ -1.05
HMGN1P20-201ENST00000411849 ZNF831Q5JPB2 1677 aa8.48□□□□□ -1.05
HMGN1P20-201ENST00000411849 SBF1O95248 1867 aa8.47□□□□□ -1.05
HMGN1P20-201ENST00000411849 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.47□□□□□ -1.05
HMGN1P20-201ENST00000411849 PHF14O94880 888 aa8.47□□□□□ -1.05
HMGN1P20-201ENST00000411849 NBPF6Q5VWK0 638 aa8.47□□□□□ -1.05
HMGN1P20-201ENST00000411849 MPRIPQ6WCQ1 1025 aa8.47□□□□□ -1.05
HMGN1P20-201ENST00000411849 DNAJC5GQ8N7S2 189 aa8.47□□□□□ -1.05
HMGN1P20-201ENST00000411849 NBPF4Q96M43 638 aa8.47□□□□□ -1.05
HMGN1P20-201ENST00000411849 CARD11Q9BXL7 1154 aa8.47□□□□□ -1.05
HMGN1P20-201ENST00000411849 WWC3Q9ULE0 1092 aa8.47□□□□□ -1.05
HMGN1P20-201ENST00000411849 C4AP0C0L4 1744 aa8.46□□□□□ -1.05
HMGN1P20-201ENST00000411849 COL5A3P25940 1745 aaPredicted RBP8.46□□□□□ -1.05
HMGN1P20-201ENST00000411849 ANKRD26Q9UPS8 1709 aa8.46□□□□□ -1.05
HMGN1P20-201ENST00000411849 PXDNLA1KZ92 1463 aa8.45□□□□□ -1.06
HMGN1P20-201ENST00000411849 SLC24A1O60721 1099 aa8.45□□□□□ -1.06
HMGN1P20-201ENST00000411849 NEUROD1Q13562 356 aa8.45□□□□□ -1.06
HMGN1P20-201ENST00000411849 CHADLQ6NUI6 762 aa8.45□□□□□ -1.06
HMGN1P20-201ENST00000411849 C16orf71Q8IYS4 520 aaPredicted RBP8.45□□□□□ -1.06
HMGN1P20-201ENST00000411849 USHBP1Q8N6Y0 703 aa8.45□□□□□ -1.06
HMGN1P20-201ENST00000411849 RBM46Q8TBY0 533 aaKnown RBP8.45□□□□□ -1.06
HMGN1P20-201ENST00000411849 SIN3AQ96ST3 1273 aa8.45□□□□□ -1.06
HMGN1P20-201ENST00000411849 INSRP06213 1382 aa8.45□□□□□ -1.06
HMGN1P20-201ENST00000411849 FLT4P35916 1363 aa8.45□□□□□ -1.06
HMGN1P20-201ENST00000411849 KIF24Q5T7B8 1368 aa8.45□□□□□ -1.06
HMGN1P20-201ENST00000411849 PLEKHG2Q9H7P9 1386 aa8.45□□□□□ -1.06
HMGN1P20-201ENST00000411849 CCDC88AQ3V6T2 1871 aa8.45□□□□□ -1.06
HMGN1P20-201ENST00000411849 FBLN1P23142 703 aa8.44□□□□□ -1.06
HMGN1P20-201ENST00000411849 TGFB2P61812 414 aa8.44□□□□□ -1.06
HMGN1P20-201ENST00000411849 RRS1Q15050 365 aaKnown RBP8.44□□□□□ -1.06
HMGN1P20-201ENST00000411849 BCS1LQ9Y276 419 aa8.44□□□□□ -1.06
HMGN1P20-201ENST00000411849 LOC102724428A0A0B4J2F2 783 aa8.43□□□□□ -1.06
HMGN1P20-201ENST00000411849 GNPATO15228 680 aa8.43□□□□□ -1.06
HMGN1P20-201ENST00000411849 CYP27B1O15528 508 aa8.43□□□□□ -1.06
HMGN1P20-201ENST00000411849 MMP10P09238 476 aa8.43□□□□□ -1.06
HMGN1P20-201ENST00000411849 SIK1P57059 783 aa8.43□□□□□ -1.06
HMGN1P20-201ENST00000411849 FSTL1Q12841 308 aa8.43□□□□□ -1.06
HMGN1P20-201ENST00000411849 ARHGAP27Q6ZUM4 889 aa8.43□□□□□ -1.06
HMGN1P20-201ENST00000411849 AMIGO3Q86WK7 504 aa8.43□□□□□ -1.06
HMGN1P20-201ENST00000411849 JMYQ8N9B5 988 aa8.43□□□□□ -1.06
HMGN1P20-201ENST00000411849 KLRG1Q96E93 195 aa8.43□□□□□ -1.06
HMGN1P20-201ENST00000411849 NMRK2Q9NPI5 230 aa8.43□□□□□ -1.06
HMGN1P20-201ENST00000411849 C10orf71Q711Q0 1435 aa8.43□□□□□ -1.06
HMGN1P20-201ENST00000411849 NKX1-1Q15270 411 aaPredicted RBP8.42□□□□□ -1.06
HMGN1P20-201ENST00000411849 NLGN1Q8N2Q7 840 aa8.42□□□□□ -1.06
HMGN1P20-201ENST00000411849 LINC00116Q8NCU8 138 aa8.42□□□□□ -1.06
HMGN1P20-201ENST00000411849 PIGBQ92521 554 aa8.42□□□□□ -1.06
HMGN1P20-201ENST00000411849 TMOD3Q9NYL9 352 aa8.42□□□□□ -1.06
HMGN1P20-201ENST00000411849 SPG7Q9UQ90 795 aa8.42□□□□□ -1.06
HMGN1P20-201ENST00000411849 KDM2BQ8NHM5 1336 aa8.42□□□□□ -1.06
HMGN1P20-201ENST00000411849 MYH14Q7Z406 1995 aaKnown RBP8.41□□□□□ -1.06
HMGN1P20-201ENST00000411849 NCAPD2Q15021 1401 aa8.41□□□□□ -1.06
HMGN1P20-201ENST00000411849 A0A0G2JLW4 131 aa8.41□□□□□ -1.06
HMGN1P20-201ENST00000411849 FYB1O15117 783 aa8.41□□□□□ -1.06
HMGN1P20-201ENST00000411849 GABBR2O75899 941 aa8.41□□□□□ -1.06
HMGN1P20-201ENST00000411849 ATP6V1AP38606 617 aa8.41□□□□□ -1.06
HMGN1P20-201ENST00000411849 HSP90AB2PQ58FF8 381 aa8.41□□□□□ -1.06
HMGN1P20-201ENST00000411849 COL13A1Q5TAT6 717 aaPredicted RBP8.41□□□□□ -1.06
HMGN1P20-201ENST00000411849 SMIM5Q71RC9 77 aa8.41□□□□□ -1.06
HMGN1P20-201ENST00000411849 TNS4Q8IZW8 715 aa8.41□□□□□ -1.06
HMGN1P20-201ENST00000411849 CCDC87Q9NVE4 849 aa8.41□□□□□ -1.06
HMGN1P20-201ENST00000411849 DLEC1Q9Y238 1755 aa8.4□□□□□ -1.06
HMGN1P20-201ENST00000411849 TIAM2Q8IVF5 1701 aa8.4□□□□□ -1.06
HMGN1P20-201ENST00000411849 KCPQ6ZWJ8 1503 aa8.4□□□□□ -1.06
HMGN1P20-201ENST00000411849 FCHSD2O94868 740 aa8.4□□□□□ -1.06
HMGN1P20-201ENST00000411849 PRELPP51888 382 aa8.4□□□□□ -1.06
HMGN1P20-201ENST00000411849 TMF1P82094 1093 aa8.4□□□□□ -1.06
HMGN1P20-201ENST00000411849 ITPK1Q13572 414 aa8.4□□□□□ -1.06
HMGN1P20-201ENST00000411849 TRAPPC3LQ5T215 181 aa8.4□□□□□ -1.06
HMGN1P20-201ENST00000411849 GGNBP2Q9H3C7 697 aa8.4□□□□□ -1.06
HMGN1P20-201ENST00000411849 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.4□□□□□ -1.06
HMGN1P20-201ENST00000411849 RTCBQ9Y3I0 505 aaKnown RBP8.4□□□□□ -1.06
HMGN1P20-201ENST00000411849 TONSLQ96HA7 1378 aa8.39□□□□□ -1.07
HMGN1P20-201ENST00000411849 DPEP1P16444 411 aa8.39□□□□□ -1.07
HMGN1P20-201ENST00000411849 C9orf131Q5VYM1 1079 aa8.39□□□□□ -1.07
HMGN1P20-201ENST00000411849 TESK2Q96S53 571 aa8.39□□□□□ -1.07
HMGN1P20-201ENST00000411849 ASAP1Q9ULH1 1129 aa8.39□□□□□ -1.07
HMGN1P20-201ENST00000411849 PARP3Q9Y6F1 533 aa8.39□□□□□ -1.07
HMGN1P20-201ENST00000411849 DICER1Q9UPY3 1922 aaKnown RBP8.39□□□□□ -1.07
HMGN1P20-201ENST00000411849 AFDNP55196 1824 aaKnown RBP8.38□□□□□ -1.07
HMGN1P20-201ENST00000411849 VIRMAQ69YN4 1812 aaKnown RBP8.38□□□□□ -1.07
HMGN1P20-201ENST00000411849 KDRP35968 1356 aa8.38□□□□□ -1.07
HMGN1P20-201ENST00000411849 ST20-MTHFSA0A0A6YYL1 179 aa8.38□□□□□ -1.07
HMGN1P20-201ENST00000411849 RFC4P35249 363 aa8.38□□□□□ -1.07
HMGN1P20-201ENST00000411849 HTRA3P83110 453 aa8.38□□□□□ -1.07
HMGN1P20-201ENST00000411849 IFNL2Q8IZJ0 200 aa8.38□□□□□ -1.07
HMGN1P20-201ENST00000411849 SMC1BQ8NDV3 1235 aa8.38□□□□□ -1.07
HMGN1P20-201ENST00000411849 PIM2Q9P1W9 311 aa8.38□□□□□ -1.07
HMGN1P20-201ENST00000411849 DALRD3Q5D0E6 543 aaKnown RBP8.37□□□□□ -1.07
HMGN1P20-201ENST00000411849 RC3H1Q5TC82 1133 aaKnown RBP8.37□□□□□ -1.07
HMGN1P20-201ENST00000411849 DCAF5Q96JK2 942 aa8.37□□□□□ -1.07
HMGN1P20-201ENST00000411849 ATG3Q9NT62 314 aa8.37□□□□□ -1.07
HMGN1P20-201ENST00000411849 RNF181Q9P0P0 153 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms